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Protein

40S ribosomal protein S10a

Gene

RpS10a

Organism
Drosophila melanogaster (Fruit fly)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • RNA binding Source: GO_Central
  • structural constituent of ribosome Source: FlyBase

GO - Biological processi

  • cytoplasmic translation Source: FlyBase
  • ribosomal small subunit assembly Source: GO_Central

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-DME-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-DME-1799339 SRP-dependent cotranslational protein targeting to membrane
R-DME-6791226 Major pathway of rRNA processing in the nucleolus and cytosol
R-DME-72649 Translation initiation complex formation
R-DME-72689 Formation of a pool of free 40S subunits
R-DME-72695 Formation of the ternary complex, and subsequently, the 43S complex
R-DME-72702 Ribosomal scanning and start codon recognition
R-DME-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-DME-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-DME-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S10a
Gene namesi
Name:RpS10a
Synonyms:RpS10
ORF Names:CG12275
OrganismiDrosophila melanogaster (Fruit fly)
Taxonomic identifieri7227 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraHolometabolaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora
Proteomesi
  • UP000000803 Componenti: Chromosome 3R

Organism-specific databases

FlyBaseiFBgn0027494 RpS10a

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001163661 – 16340S ribosomal protein S10aAdd BLAST163

Proteomic databases

PaxDbiQ9VB14
PRIDEiQ9VB14

Expressioni

Gene expression databases

BgeeiFBgn0027494
GenevisibleiQ9VB14 DM

Interactioni

Protein-protein interaction databases

IntActiQ9VB14, 1 interactor
STRINGi7227.FBpp0084564

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4V6Welectron microscopy6.00AK1-163[»]
ProteinModelPortaliQ9VB14
SMRiQ9VB14
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG3344 Eukaryota
COG5045 LUCA
GeneTreeiENSGT00440000034918
InParanoidiQ9VB14
KOiK02947
OMAiDGCIVCH
OrthoDBiEOG091G0QTW
PhylomeDBiQ9VB14

Family and domain databases

Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR037447 Rps10
IPR005326 S10_plectin_N
IPR036388 WH-like_DNA-bd_sf
PANTHERiPTHR12146 PTHR12146, 1 hit
PfamiView protein in Pfam
PF03501 S10_plectin, 1 hit

Sequencei

Sequence statusi: Complete.

Q9VB14-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFIPKANRVA IYEYLFKEGV LVAKKDSPIQ KHSELDKIPN LQVIKVMQSL
60 70 80 90 100
NSRGWVKEQF AWRHFYWLLT NEGIEELRRY LHLPPEIVPS TLTQTTRSNA
110 120 130 140 150
VRPRGGPGGP GGGFGGASKT DDDRSNYRRG PGAYGMDKKG DVGAGTGRVE
160
YRGGFGRASR YDN
Length:163
Mass (Da):18,231
Last modified:May 1, 2000 - v1
Checksum:iFC4455BFA33D0642
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014297 Genomic DNA Translation: AAF56731.1
AF145693 mRNA Translation: AAD38668.2
RefSeqiNP_651576.1, NM_143319.4
UniGeneiDm.3124

Genome annotation databases

EnsemblMetazoaiFBtr0085194; FBpp0084564; FBgn0027494
GeneIDi43321
KEGGidme:Dmel_CG12275

Similar proteinsi

Entry informationi

Entry nameiRS10A_DROME
AccessioniPrimary (citable) accession number: Q9VB14
Secondary accession number(s): Q9Y0Y3
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 19, 2001
Last sequence update: May 1, 2000
Last modified: March 28, 2018
This is version 118 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programDrosophila annotation project

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Drosophila
    Drosophila: entries, gene names and cross-references to FlyBase
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. Ribosomal proteins
    Ribosomal proteins families and list of entries
  4. SIMILARITY comments
    Index of protein domains and families

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