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Protein

Probable mRNA-splicing protein ubp10

Gene

ubp10

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

May play a role in mRNA splicing. It is unsure if the protein really exhibits hydrolase activity. Could be a competitor of ubiquitin C-terminal hydrolases (UCHs) (By similarity).By similarity

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri75 – 136UBP-typePROSITE-ProRule annotationAdd BLAST62

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein
Biological processmRNA processing, mRNA splicing
LigandMetal-binding, Zinc

Protein family/group databases

MEROPSiC19.972

Names & Taxonomyi

Protein namesi
Recommended name:
Probable mRNA-splicing protein ubp10
Alternative name(s):
Probable inactive ubiquitin-specific-processing protease 10
Gene namesi
Name:ubp10
ORF Names:SPBC577.07
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome II

Organism-specific databases

EuPathDBiFungiDB:SPBC577.07
PomBaseiSPBC577.07 ubp10

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus, Spliceosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003514431 – 502Probable mRNA-splicing protein ubp10Add BLAST502

Proteomic databases

MaxQBiQ9USR2
PaxDbiQ9USR2
PRIDEiQ9USR2

Interactioni

Protein-protein interaction databases

STRINGi4896.SPBC577.07.1

Structurei

3D structure databases

ProteinModelPortaliQ9USR2
SMRiQ9USR2
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini178 – 501USPAdd BLAST324

Sequence similaritiesi

Belongs to the peptidase C19 family.Curated

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri75 – 136UBP-typePROSITE-ProRule annotationAdd BLAST62

Keywords - Domaini

Zinc-finger

Phylogenomic databases

HOGENOMiHOG000188754
InParanoidiQ9USR2
KOiK12847
OMAiCNVVLHA
OrthoDBiEOG092C2SDN
PhylomeDBiQ9USR2

Family and domain databases

CDDicd02669 Peptidase_C19M, 1 hit
Gene3Di3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR038765 Papain_like_cys_pep_sf
IPR001394 Peptidase_C19_UCH
IPR033809 USP39
IPR028889 USP_dom
IPR013083 Znf_RING/FYVE/PHD
IPR001607 Znf_UBP
PANTHERiPTHR43985 PTHR43985, 1 hit
PfamiView protein in Pfam
PF00443 UCH, 1 hit
PF02148 zf-UBP, 1 hit
SMARTiView protein in SMART
SM00290 ZnF_UBP, 1 hit
SUPFAMiSSF54001 SSF54001, 1 hit
PROSITEiView protein in PROSITE
PS50235 USP_3, 1 hit
PS50271 ZF_UBP, 1 hit

Sequencei

Sequence statusi: Complete.

Q9USR2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSENKDKNNI LKRHIEEDNN IDNGKRKKLE LGKDMEDVHD IASKEMEEHE
60 70 80 90 100
TTPIISQNLY LDTINRKLLD FDFEKVCSVS LTNLSVYACL VCGRYFQGRG
110 120 130 140 150
PSSHAYFHAL TENHHVFVNC STLKFYVLPE SYQVESSALQ DIAYVMRPTF
160 170 180 190 200
TKLEVQRLDH TPQLSYDLML KPYVPGFVGM NNIKNNDYFN VVIHMLAHVK
210 220 230 240 250
PFRNYFLLKN FDNCPQLVQR LAILIRKLWN HKAFKSHVSP QELIQEVTVL
260 270 280 290 300
SHKKYSINEQ KDPVEFLSWF LNTLHNCLGG KKSTIAKPTS IVHYSFQGFV
310 320 330 340 350
RIESQKIRQH AEKGEQVVFT GDRVIQTNVV PFLYLTLDLP PKPIFQDEFE
360 370 380 390 400
GNIIPQVELK EILNKYNGVH TQELAGMRRR FHLMTAPPYF IFHIKRFMKN
410 420 430 440 450
NYFTERNQTI VTFPLDDFDM SPFIDDSFIQ SNPKISTKYN LVANIIHESV
460 470 480 490 500
THAEEEFHNF RIQIRNPSTN KWYQIQDLYV EEISSDMIRL GESFIQLWER

SS
Length:502
Mass (Da):58,885
Last modified:May 1, 2000 - v1
Checksum:i491CED10CC66E8B7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA Translation: CAB54815.1
PIRiT40551
RefSeqiNP_595305.1, NM_001021212.2

Genome annotation databases

EnsemblFungiiSPBC577.07.1; SPBC577.07.1:pep; SPBC577.07
GeneIDi2540864
KEGGispo:SPBC577.07

Similar proteinsi

Entry informationi

Entry nameiUBP10_SCHPO
AccessioniPrimary (citable) accession number: Q9USR2
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 14, 2008
Last sequence update: May 1, 2000
Last modified: June 20, 2018
This is version 104 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Peptidase families
    Classification of peptidase families and list of entries
  2. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  3. SIMILARITY comments
    Index of protein domains and families

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