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Entry version 150 (16 Oct 2019)
Sequence version 3 (28 Jul 2009)
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Protein

Protein Smaug homolog 1

Gene

SAMD4A

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Acts as a translational repressor of SRE-containing messengers.1 Publication

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionRepressor
Biological processTranslation regulation

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Protein Smaug homolog 1
Short name:
Smaug 1
Short name:
hSmaug1
Alternative name(s):
Sterile alpha motif domain-containing protein 4A
Short name:
SAM domain-containing protein 4A
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:SAMD4A
Synonyms:KIAA1053, SAMD4, SMAUG1
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiHomo sapiens (Human)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri9606 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000005640 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 14

Organism-specific databases

Human Gene Nomenclature Database

More...
HGNCi
HGNC:23023 SAMD4A

Online Mendelian Inheritance in Man (OMIM)

More...
MIMi
610747 gene

neXtProt; the human protein knowledge platform

More...
neXtProti
NX_Q9UPU9

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Keywords - Cellular componenti

Cell junction, Cell projection, Cytoplasm, Synapse, Synaptosome

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

Organism-specific databases

DisGeNET

More...
DisGeNETi
23034

Open Targets

More...
OpenTargetsi
ENSG00000020577

The Pharmacogenetics and Pharmacogenomics Knowledge Base

More...
PharmGKBi
PA128394596

Miscellaneous databases

Pharos NIH Druggable Genome Knowledgebase

More...
Pharosi
Q9UPU9

Polymorphism and mutation databases

BioMuta curated single-nucleotide variation and disease association database

More...
BioMutai
SAMD4A

Domain mapping of disease mutations (DMDM)

More...
DMDMi
254763391

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00000975701 – 718Protein Smaug homolog 1Add BLAST718

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei168PhosphoserineCombined sources1
Modified residuei420PhosphoserineCombined sources1
Modified residuei424PhosphothreonineCombined sources1
Modified residuei573Omega-N-methylarginineBy similarity1
Modified residuei580PhosphoserineBy similarity1

Keywords - PTMi

Methylation, Phosphoprotein

Proteomic databases

Encyclopedia of Proteome Dynamics

More...
EPDi
Q9UPU9

jPOST - Japan Proteome Standard Repository/Database

More...
jPOSTi
Q9UPU9

MassIVE - Mass Spectrometry Interactive Virtual Environment

More...
MassIVEi
Q9UPU9

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q9UPU9

PeptideAtlas

More...
PeptideAtlasi
Q9UPU9

PRoteomics IDEntifications database

More...
PRIDEi
Q9UPU9

ProteomicsDB: a multi-organism proteome resource

More...
ProteomicsDBi
85450 [Q9UPU9-1]
85451 [Q9UPU9-2]
85452 [Q9UPU9-3]

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q9UPU9

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
Q9UPU9

SwissPalm database of S-palmitoylation events

More...
SwissPalmi
Q9UPU9

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSG00000020577 Expressed in 231 organ(s), highest expression level in inferior olivary complex

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q9UPU9 baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q9UPU9 HS

Organism-specific databases

Human Protein Atlas

More...
HPAi
HPA043061
HPA065309

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the '<a href="http://www.uniprot.org/help/interaction_section%27">Interaction</a> section provides information about binary protein-protein interactions. The data presented in this section are a quality-filtered subset of binary interactions automatically derived from the <a href="http://www.ebi.ac.uk/intact/">IntAct database</a>. It is updated on a monthly basis. Each binary interaction is displayed on a separate line.<p><a href='/help/binary_interactions' target='_top'>More...</a></p>Binary interactionsi

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGrid)

More...
BioGridi
116673, 17 interactors

Protein interaction database and analysis system

More...
IntActi
Q9UPU9, 27 interactors

Molecular INTeraction database

More...
MINTi
Q9UPU9

STRING: functional protein association networks

More...
STRINGi
9606.ENSP00000375919

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini323 – 391SAMAdd BLAST69

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the SMAUG family.Curated

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG3791 Eukaryota
ENOG410XSUP LUCA

Ensembl GeneTree

More...
GeneTreei
ENSGT00940000157933

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000290216

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q9UPU9

Identification of Orthologs from Complete Genome Data

More...
OMAi
INTSNWQ

Database of Orthologous Groups

More...
OrthoDBi
670335at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q9UPU9

TreeFam database of animal gene trees

More...
TreeFami
TF324165

Family and domain databases

Conserved Domains Database

More...
CDDi
cd09557 SAM_Smaug, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
1.10.150.50, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR001660 SAM
IPR013761 SAM/pointed_sf
IPR037634 Smaug_SAM

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00536 SAM_1, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00454 SAM, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF47769 SSF47769, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (3+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 3 <p>This subsection of the ‘Sequence’ section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 3 described isoforms and 1 potential isoform that is computationally mapped.Show allAlign All

Isoform 1 (identifier: Q9UPU9-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MMFRDQVGVL AGWFKGWNEC EQTVALLSLL KRVSQTQARF LQLCLEHSLA
60 70 80 90 100
DCAELHVLER EANSPGIINQ WQQESKDKVI SLLLTHLPLL KPGNLDAKVE
110 120 130 140 150
YMKLLPKILA HSIEHNQHIE ESRQLLSYAL IHPATSLEDR SALAMWLNHL
160 170 180 190 200
EDRTSTSFGG QNRGRSDSVD YGQTHYYHQR QNSDDKLNGW QNSRDSGICI
210 220 230 240 250
NASNWQDKSM GCENGHVPLY SSSSVPTTIN TIGTSTSTIL SGQAHHSPLK
260 270 280 290 300
RSVSLTPPMN VPNQPLGHGW MSHEDLRARG PQCLPSDHAP LSPQSSVASS
310 320 330 340 350
GSGGSEHLED QTTARNTFQE EGSGMKDVPA WLKSLRLHKY AALFSQMTYE
360 370 380 390 400
EMMALTECQL EAQNVTKGAR HKIVISIQKL KERQNLLKSL ERDIIEGGSL
410 420 430 440 450
RIPLQELHQM ILTPIKAYSS PSTTPEARRR EPQAPRQPSL MGPESQSPDC
460 470 480 490 500
KDGAAATGAT ATPSAGASGG LQPHQLSSCD GELAVAPLPE GDLPGQFTRV
510 520 530 540 550
MGKVCTQLLV SRPDEENISS YLQLIDKCLI HEAFTETQKK RLLSWKQQVQ
560 570 580 590 600
KLFRSFPRKT LLDISGYRQQ RNRGFGQSNS LPTAGSVGGG MGRRNPRQYQ
610 620 630 640 650
IPSRNVPSAR LGLLGTSGFV SSNQRNTTAT PTIMKQGRQN LWFANPGGSN
660 670 680 690 700
SMPSRTHSSV QRTRSLPVHT SPQNMLMFQQ PEFQLPVTEP DINNRLESLC
710
LSMTEHALGD GVDRTSTI
Length:718
Mass (Da):79,415
Last modified:July 28, 2009 - v3
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i01F5D49E6447F771
GO
Isoform 2 (identifier: Q9UPU9-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-101: Missing.

Show »
Length:617
Mass (Da):67,929
Checksum:i5808A07C51439A57
GO
Isoform 3 (identifier: Q9UPU9-3) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     239-327: ILSGQAHHSP...FQEEGSGMKD → N

Show »
Length:630
Mass (Da):70,095
Checksum:iCDD4F9337B6ED487
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
G3V2R1G3V2R1_HUMAN
Protein Smaug homolog 1
SAMD4A hCG_2028314
345Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

<p>This subsection of the ‘Sequence’ section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence AAH57838 differs from that shown. Intron retention.Curated
The sequence AAP97302 differs from that shown. Intron retention.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti108I → T in AAH57838 (PubMed:15489334).Curated1
Sequence conflicti138E → K in AK024652 (PubMed:14702039).Curated1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_0377781 – 101Missing in isoform 2. 1 PublicationAdd BLAST101
Alternative sequenceiVSP_037779239 – 327ILSGQ…SGMKD → N in isoform 3. 2 PublicationsAdd BLAST89

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AL133444 Genomic DNA No translation available.
AL138994 Genomic DNA No translation available.
AL359792 Genomic DNA No translation available.
AF429970 mRNA Translation: AAP97302.1 Sequence problems.
BC057838 mRNA Translation: AAH57838.1 Sequence problems.
BC121173 mRNA Translation: AAI21174.1
BC121174 mRNA Translation: AAI21175.1
AK024652 mRNA No translation available.
AB028976 mRNA Translation: BAA83005.1

The Consensus CDS (CCDS) project

More...
CCDSi
CCDS32084.2 [Q9UPU9-1]
CCDS55917.2 [Q9UPU9-3]

NCBI Reference Sequences

More...
RefSeqi
NP_001155048.2, NM_001161576.2 [Q9UPU9-3]
NP_001155049.1, NM_001161577.1
NP_056404.4, NM_015589.5 [Q9UPU9-1]

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENST00000251091; ENSP00000251091; ENSG00000020577 [Q9UPU9-3]
ENST00000392067; ENSP00000375919; ENSG00000020577 [Q9UPU9-1]
ENST00000554335; ENSP00000452535; ENSG00000020577 [Q9UPU9-1]

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
23034

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
hsa:23034

UCSC genome browser

More...
UCSCi
uc001xbb.4 human [Q9UPU9-1]

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL133444 Genomic DNA No translation available.
AL138994 Genomic DNA No translation available.
AL359792 Genomic DNA No translation available.
AF429970 mRNA Translation: AAP97302.1 Sequence problems.
BC057838 mRNA Translation: AAH57838.1 Sequence problems.
BC121173 mRNA Translation: AAI21174.1
BC121174 mRNA Translation: AAI21175.1
AK024652 mRNA No translation available.
AB028976 mRNA Translation: BAA83005.1
CCDSiCCDS32084.2 [Q9UPU9-1]
CCDS55917.2 [Q9UPU9-3]
RefSeqiNP_001155048.2, NM_001161576.2 [Q9UPU9-3]
NP_001155049.1, NM_001161577.1
NP_056404.4, NM_015589.5 [Q9UPU9-1]

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

BioGridi116673, 17 interactors
IntActiQ9UPU9, 27 interactors
MINTiQ9UPU9
STRINGi9606.ENSP00000375919

PTM databases

iPTMnetiQ9UPU9
PhosphoSitePlusiQ9UPU9
SwissPalmiQ9UPU9

Polymorphism and mutation databases

BioMutaiSAMD4A
DMDMi254763391

Proteomic databases

EPDiQ9UPU9
jPOSTiQ9UPU9
MassIVEiQ9UPU9
PaxDbiQ9UPU9
PeptideAtlasiQ9UPU9
PRIDEiQ9UPU9
ProteomicsDBi85450 [Q9UPU9-1]
85451 [Q9UPU9-2]
85452 [Q9UPU9-3]

Protocols and materials databases

The DNASU plasmid repository

More...
DNASUi
23034

Genome annotation databases

EnsembliENST00000251091; ENSP00000251091; ENSG00000020577 [Q9UPU9-3]
ENST00000392067; ENSP00000375919; ENSG00000020577 [Q9UPU9-1]
ENST00000554335; ENSP00000452535; ENSG00000020577 [Q9UPU9-1]
GeneIDi23034
KEGGihsa:23034
UCSCiuc001xbb.4 human [Q9UPU9-1]

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
23034
DisGeNETi23034

GeneCards: human genes, protein and diseases

More...
GeneCardsi
SAMD4A
HGNCiHGNC:23023 SAMD4A
HPAiHPA043061
HPA065309
MIMi610747 gene
neXtProtiNX_Q9UPU9
OpenTargetsiENSG00000020577
PharmGKBiPA128394596

Human Unidentified Gene-Encoded large proteins database

More...
HUGEi
Search...

GenAtlas: human gene database

More...
GenAtlasi
Search...

Phylogenomic databases

eggNOGiKOG3791 Eukaryota
ENOG410XSUP LUCA
GeneTreeiENSGT00940000157933
HOGENOMiHOG000290216
InParanoidiQ9UPU9
OMAiINTSNWQ
OrthoDBi670335at2759
PhylomeDBiQ9UPU9
TreeFamiTF324165

Miscellaneous databases

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

More...
ChiTaRSi
SAMD4A human

Database of phenotypes from RNA interference screens in Drosophila and Homo sapiens

More...
GenomeRNAii
23034
PharosiQ9UPU9

Protein Ontology

More...
PROi
PR:Q9UPU9

The Stanford Online Universal Resource for Clones and ESTs

More...
SOURCEi
Search...

Gene expression databases

BgeeiENSG00000020577 Expressed in 231 organ(s), highest expression level in inferior olivary complex
ExpressionAtlasiQ9UPU9 baseline and differential
GenevisibleiQ9UPU9 HS

Family and domain databases

CDDicd09557 SAM_Smaug, 1 hit
Gene3Di1.10.150.50, 1 hit
InterProiView protein in InterPro
IPR001660 SAM
IPR013761 SAM/pointed_sf
IPR037634 Smaug_SAM
PfamiView protein in Pfam
PF00536 SAM_1, 1 hit
SMARTiView protein in SMART
SM00454 SAM, 1 hit
SUPFAMiSSF47769 SSF47769, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
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MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiSMAG1_HUMAN
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q9UPU9
Secondary accession number(s): A8MPZ5, Q0VA96, Q6PEW4
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 19, 2003
Last sequence update: July 28, 2009
Last modified: October 16, 2019
This is version 150 of the entry and version 3 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
  3. Human chromosome 14
    Human chromosome 14: entries, gene names and cross-references to MIM
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