RARRES3

Functionⁱ

Exhibits PLA1/2 activity, catalyzing the calcium-independent hydrolysis of acyl groups in various phosphatidylcholines (PC) and phosphatidylethanolamine (PE). For most substrates, PLA1 activity is much higher than PLA2 activity. N- and O-acylation activity is hardly detectable.1 Publication

Kineticsⁱ

K_M=
400 µM for dipalmitoyl-PC
1 Publication
Manual assertion based on experiment inⁱ
- Ref.3
  "Characterization of the human tumor suppressors TIG3 and HRASLS2 as phospholipid-metabolizing enzymes."
  Uyama T., Jin X.H., Tsuboi K., Tonai T., Ueda N.
  Biochim. Biophys. Acta 1791:1114-1124(2009) [PubMed] [Europe PMC] [Abstract]
  Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), FUNCTION, TISSUE SPECIFICITY, BIOPHYSICOCHEMICAL PROPERTIES.

pH dependenceⁱ

Optimum pH is 8.1 Publication

GO - Molecular functionⁱ

phospholipase A2 activity
Source: UniProtKB
Inferred from direct assayⁱ
- 20100577
transferase activity, transferring acyl groups Source: Reactome

View the complete GO annotation on QuickGO ...

GO - Biological processⁱ

lipid catabolic process Source: UniProtKB-KW
negative regulation of cell proliferation
Source: ProtInc
Traceable author statementⁱ
- 9843971
phosphatidylethanolamine acyl-chain remodeling Source: Reactome
phospholipid metabolic process
Source: UniProtKB
Inferred from direct assayⁱ
- 20100577

View the complete GO annotation on QuickGO ...

Keywordsⁱ

Molecular function	Hydrolase
Biological process	Lipid degradation, Lipid metabolism

Enzyme and pathway databases

Reactomeⁱ	R-HSA-1482839 Acyl chain remodelling of PE

Reactomeⁱ

R-HSA-1482839 Acyl chain remodelling of PE

Chemistry databases

SwissLipidsⁱ	SLP:000001076

SwissLipidsⁱ

SLP:000001076

Names & Taxonomyⁱ

Protein namesⁱ	Recommended name: Retinoic acid receptor responder protein 3 (EC:3.1.1.-) Alternative name(s): HRAS-like suppressor 4 Short name: HRSL4 RAR-responsive protein TIG3 Retinoid-inducible gene 1 protein Tazarotene-induced gene 3 protein
Gene namesⁱ	Name:RARRES3 Synonyms:RIG1, TIG3
Organismⁱ	Homo sapiens (Human)
Taxonomic identifierⁱ	9606 [NCBI]
Taxonomic lineageⁱ	cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Dipnotetrapodomorpha › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Boreoeutheria › Euarchontoglires › Primates › Haplorrhini › Simiiformes › Catarrhini › Hominoidea › Hominidae › Homininae › Homo
Proteomesⁱ	UP000005640 Componentⁱ: Chromosome 11

Organism-specific databases

EuPathDBⁱ	HostDB:ENSG00000133321.10
Human Gene Nomenclature Database More...HGNCⁱ	HGNC:9869 RARRES3
MIMⁱ	605092 gene
neXtProtⁱ	NX_Q9UL19

Topology

Feature key	Position(s)	DescriptionActions	Length
Topological domainⁱ	1 – 133	CytoplasmicSequence analysisAdd BLAST	133
Transmembraneⁱ	134 – 155	HelicalSequence analysisAdd BLAST	22
Topological domainⁱ	156 – 164	LumenalSequence analysis	9

Keywords - Cellular componentⁱ

Membrane

Pathology & Biotechⁱ

Organism-specific databases

DisGeNET More...DisGeNETⁱ	5920
Open Targets More...OpenTargetsⁱ	ENSG00000133321
PharmGKBⁱ	PA34230

Polymorphism and mutation databases

BioMutaⁱ	RARRES3
DMDMⁱ	20140910

PTM / Processingⁱ

Molecule processing

Feature key	Position(s)	DescriptionActions	Graphical view	Length
ChainⁱPRO_0000152490	1 – 164	Retinoic acid receptor responder protein 3Add BLAST		164

Proteomic databases

PaxDbⁱ	Q9UL19
PeptideAtlas More...PeptideAtlasⁱ	Q9UL19
PRIDEⁱ	Q9UL19
ProteomicsDBⁱ	84932 84933 [Q9UL19-2]

PTM databases

iPTMnetⁱ	Q9UL19
PhosphoSitePlusⁱ	Q9UL19

Expressionⁱ

Tissue specificityⁱ

Widely expressed.2 Publications

Inductionⁱ

By all-trans-retinoic acid and synthetic retinoids.1 Publication

Gene expression databases

Bgeeⁱ	ENSG00000133321 Expressed in 222 organ(s), highest expression level in epithelium of bronchus
CleanExⁱ	HS_RARRES3
ExpressionAtlasⁱ	Q9UL19 baseline and differential
Genevisibleⁱ	Q9UL19 HS

Interactionⁱ

Binary interactionsⁱ

With	Entry	#Exp.	IntAct	Notes
SGTA	O43765	3	EBI-10323452,EBI-347996

With

Entry

#Exp.

IntAct

Notes

SGTA

O43765

3

EBI-10323452,EBI-347996

Protein-protein interaction databases

BioGridⁱ	111855, 13 interactors
IntActⁱ	Q9UL19, 2 interactors
STRINGⁱ	9606.ENSP00000255688

Structureⁱ

Secondary structure

Legend: HelixTurnBeta strandPDB Structure known for this area

Feature key	Position(s)	DescriptionActions	Length
Beta strandⁱ	3 – 5	Combined sources	3
Beta strandⁱ	13 – 17	Combined sources	5
Beta strandⁱ	19 – 21	Combined sources	3
Beta strandⁱ	23 – 29	Combined sources	7
Beta strandⁱ	32 – 37	Combined sources	6
Helixⁱ	42 – 44	Combined sources	3
Beta strandⁱ	50 – 52	Combined sources	3
Beta strandⁱ	58 – 64	Combined sources	7
Helixⁱ	65 – 69	Combined sources	5
Beta strandⁱ	73 – 76	Combined sources	4
Helixⁱ	79 – 83	Combined sources	5
Helixⁱ	89 – 99	Combined sources	11
Helixⁱ	109 – 121	Combined sources	13

Show more details

3D structure databases

ProteinModelPortalⁱ	Q9UL19
SMRⁱ	Q9UL19
ModBaseⁱ	Search...
MobiDBⁱ	Search...

Family & Domainsⁱ

Sequence similaritiesⁱ

Belongs to the H-rev107 family.Curated

Keywords - Domainⁱ

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGⁱ	ENOG410J5BU Eukaryota ENOG410Y257 LUCA
Ensembl GeneTree More...GeneTreeⁱ	ENSGT00390000013327
HOGENOMⁱ	HOG000293227
HOVERGENⁱ	HBG028837
InParanoidⁱ	Q9UL19
OMAⁱ	RYGRSHC
PhylomeDBⁱ	Q9UL19
TreeFamⁱ	TF330836

Family and domain databases

InterProⁱ	View protein in InterPro IPR007053 LRAT-like_dom IPR033210 RARRES3
PANTHERⁱ	PTHR13943:SF36 PTHR13943:SF36, 1 hit
Pfam protein domain database More...Pfamⁱ	View protein in Pfam PF04970 LRAT, 1 hit

Sequences (2+)ⁱ

Sequence statusⁱ: Complete.

This entry describes 2 isoformsⁱ produced by alternative splicing. Align Add to basket

This entry has 2 described isoforms and 1 potential isoform that is computationally mapped.Show all Align All

Isoform 1 (identifier: Q9UL19-1) [UniParc]FASTA Add to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MASPHQEPKP GDLIEIFRLG YEHWALYIGD GYVIHLAPPS EYPGAGSSSV 
        60         70         80         90        100
FSVLSNSAEV KRERLEDVVG GCCYRVNNSL DHEYQPRPVE VIISSAKEMV 
       110        120        130        140        150
GQKMKYSIVS RNCEHFVTQL RYGKSRCKQV EKAKVEVGVA TALGILVVAG 
       160 
CSFAIRRYQK KATA

Length:164

Mass (Da):18,179

Last modified:May 1, 2000 - v1

Checksum:ⁱ95625B8FD375FD38

GO

Isoform 2 (identifier: Q9UL19-2) [UniParc]FASTA Add to basket

The sequence of this isoform differs from the canonical sequence as follows:
131-164: EKAKVEVGVATALGILVVAGCSFAIRRYQKKATA → RTSLDNPSPSAWGWTHGAVQPGDHCE

« Hide

        10         20         30         40         50
MASPHQEPKP GDLIEIFRLG YEHWALYIGD GYVIHLAPPS EYPGAGSSSV 
        60         70         80         90        100
FSVLSNSAEV KRERLEDVVG GCCYRVNNSL DHEYQPRPVE VIISSAKEMV 
       110        120        130        140        150
GQKMKYSIVS RNCEHFVTQL RYGKSRCKQV RTSLDNPSPS AWGWTHGAVQ 

PGDHCE

Note: No experimental confirmation available.

Show »

Length:156

Mass (Da):17,436

Checksum:ⁱC9DA5B23E1BC9C8A

GO

Computationally mapped potential isoform sequencesⁱ

There is 1 potential isoform mapped to this entry.BLAST Align Show all Add to basket

	Entry	Entry name		Protein names	Gene names	Length	Annotation

	A6NG31	A6NG31_HUMAN		Retinoic acid receptor responder pr... Retinoic acid receptor responder protein 3	RARRES3	164	Annotation score:

Experimental Info

Feature key	Position(s)	DescriptionActions	Length
Sequence conflictⁱ	44	G → R in BAG56873 (PubMed:14702039).Curated	1
Sequence conflictⁱ	63	E → G in AAC84000 (PubMed:9843971).Curated	1
Sequence conflictⁱ	118	T → A in AAC84000 (PubMed:9843971).Curated	1

Natural variant

Feature key	Position(s)	DescriptionActions	Graphical view	Length
Natural variantⁱVAR_049480	69	V → L. Corresponds to variant dbSNP:rs35502888Ensembl.		1
Natural variantⁱVAR_049481	162	A → V. Corresponds to variant dbSNP:rs35845275Ensembl.		1

Alternative sequence

Feature key	Position(s)	DescriptionActions	Graphical view	Length
Alternative sequenceⁱVSP_041496	131 – 164	EKAKV…KKATA → RTSLDNPSPSAWGWTHGAVQ PGDHCE in isoform 2. 1 PublicationAdd BLAST		34

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	AF060228 mRNA Translation: AAC84000.1 AF092922 mRNA Translation: AAF02294.1 AB453252 mRNA Translation: BAH22446.1 AB030815 mRNA Translation: BAB08109.1 AK293357 mRNA Translation: BAG56873.1 AK312110 mRNA Translation: BAG35046.1 AP001591 Genomic DNA No translation available. CH471076 Genomic DNA Translation: EAW74156.1 BC009678 mRNA Translation: AAH09678.1
The Consensus CDS (CCDS) project More...CCDSⁱ	CCDS41662.1 [Q9UL19-1]
NCBI Reference Sequences More...RefSeqⁱ	NP_004576.2, NM_004585.4 [Q9UL19-1]
UniGeneⁱ	Hs.17466

Genome annotation databases

Ensemblⁱ	ENST00000255688; ENSP00000255688; ENSG00000133321 [Q9UL19-1] ENST00000439013; ENSP00000402943; ENSG00000133321 [Q9UL19-2]
GeneIDⁱ	5920
KEGGⁱ	hsa:5920
UCSC genome browser More...UCSCⁱ	uc001nxf.5 human [Q9UL19-1]

Keywords - Coding sequence diversityⁱ

Alternative splicing, Polymorphism

Similar proteinsⁱ

100% Identity
90% Identity
50% Identity

Protein	Similar proteins		Species	Score	Length	Source
Q9UL19-2	RARRES3 isoform 2		PANTR		156	UniRef100_A0A2J8LDZ1

Protein	Similar proteins		Species	Score	Length	Source
Q9UL19	Retinoic acid receptor responder 3		GORGO		166	UniRef90_Q9UL19
Retinoic acid receptor responder protein 3		HUMAN		164
RARRES3 isoform 3		PANTR		164
Uncharacterized protein		PANPA		164
Retinoic acid receptor responder protein 3		HUMAN		164
+5
Q9UL19-2	RARRES3 isoform 2		PANTR		156	UniRef90_A0A2J8LDZ1
RARRES3 isoform 2		PONAB		156

Protein	Similar proteins		Species	Score	Length	Source
Q9UL19	Retinoic acid receptor responder 3		GORGO		166	UniRef50_Q9UL19
RARRES3 isoform 5		PANTR		164
Uncharacterized protein		PANPA		164
Retinoic acid receptor responder protein 3		HUMAN		164
retinoic acid receptor responder protein 3		ODORO		204
+18
Q9UL19-2	Retinoic acid receptor responder 3		CANLF		158	UniRef50_F1PTB6
Retinoic acid receptor responder 3		COLAP		159
Uncharacterized protein		LATCH		164
Uncharacterized protein		Cebus capucinus imitator		159
Uncharacterized protein		CHLSB		159
+39

Cross-referencesⁱ

Web resourcesⁱ

Atlas of Genetics and Cytogenetics in Oncology and Haematology

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	AF060228 mRNA Translation: AAC84000.1 AF092922 mRNA Translation: AAF02294.1 AB453252 mRNA Translation: BAH22446.1 AB030815 mRNA Translation: BAB08109.1 AK293357 mRNA Translation: BAG56873.1 AK312110 mRNA Translation: BAG35046.1 AP001591 Genomic DNA No translation available. CH471076 Genomic DNA Translation: EAW74156.1 BC009678 mRNA Translation: AAH09678.1
CCDSⁱ	CCDS41662.1 [Q9UL19-1]
RefSeqⁱ	NP_004576.2, NM_004585.4 [Q9UL19-1]
UniGeneⁱ	Hs.17466

3D structure databases

Select the link destinations: Protein Data Bank Europe More...PDBeⁱ Protein Data Bank RCSB More...RCSB PDBⁱ Protein Data Bank Japan More...PDBjⁱ Links Updated	PDB entry	Method	Resolution (Å)	Chain	Positions	PDBsum
	2LKT	NMR	-	A	1-125	[»]
	2MY9	NMR	-	A	1-125	[»]
ProteinModelPortalⁱ	Q9UL19
SMRⁱ	Q9UL19
ModBaseⁱ	Search...
MobiDBⁱ	Search...

Protein-protein interaction databases

BioGridⁱ	111855, 13 interactors
IntActⁱ	Q9UL19, 2 interactors
STRINGⁱ	9606.ENSP00000255688

Chemistry databases

SwissLipidsⁱ	SLP:000001076

SwissLipidsⁱ

SLP:000001076

PTM databases

iPTMnetⁱ	Q9UL19
PhosphoSitePlusⁱ	Q9UL19

Polymorphism and mutation databases

BioMutaⁱ	RARRES3
DMDMⁱ	20140910

Proteomic databases

PaxDbⁱ	Q9UL19
PeptideAtlasⁱ	Q9UL19
PRIDEⁱ	Q9UL19
ProteomicsDBⁱ	84932 84933 [Q9UL19-2]

Protocols and materials databases

The DNASU plasmid repository More...DNASUⁱ	5920
Structural Biology Knowledgebase	Search...

Genome annotation databases

Ensemblⁱ	ENST00000255688; ENSP00000255688; ENSG00000133321 [Q9UL19-1] ENST00000439013; ENSP00000402943; ENSG00000133321 [Q9UL19-2]
GeneIDⁱ	5920
KEGGⁱ	hsa:5920
UCSCⁱ	uc001nxf.5 human [Q9UL19-1]

Organism-specific databases

CTDⁱ	5920
DisGeNETⁱ	5920
EuPathDBⁱ	HostDB:ENSG00000133321.10
GeneCardsⁱ	RARRES3
H-InvDBⁱ	HIX0128662
HGNCⁱ	HGNC:9869 RARRES3
MIMⁱ	605092 gene
neXtProtⁱ	NX_Q9UL19
OpenTargetsⁱ	ENSG00000133321
PharmGKBⁱ	PA34230
GenAtlas: human gene database More...GenAtlasⁱ	Search...

Phylogenomic databases

eggNOGⁱ	ENOG410J5BU Eukaryota ENOG410Y257 LUCA
GeneTreeⁱ	ENSGT00390000013327
HOGENOMⁱ	HOG000293227
HOVERGENⁱ	HBG028837
InParanoidⁱ	Q9UL19
OMAⁱ	RYGRSHC
PhylomeDBⁱ	Q9UL19
TreeFamⁱ	TF330836

Enzyme and pathway databases

Reactomeⁱ	R-HSA-1482839 Acyl chain remodelling of PE

Reactomeⁱ

R-HSA-1482839 Acyl chain remodelling of PE

Miscellaneous databases

ChiTaRSⁱ	RARRES3 human
GeneWikiⁱ	RARRES3
GenomeRNAiⁱ	5920
Protein Ontology More...PROⁱ	PR:Q9UL19
SOURCEⁱ	Search...

Gene expression databases

Bgeeⁱ	ENSG00000133321 Expressed in 222 organ(s), highest expression level in epithelium of bronchus
CleanExⁱ	HS_RARRES3
ExpressionAtlasⁱ	Q9UL19 baseline and differential
Genevisibleⁱ	Q9UL19 HS

Family and domain databases

InterProⁱ	View protein in InterPro IPR007053 LRAT-like_dom IPR033210 RARRES3
PANTHERⁱ	PTHR13943:SF36 PTHR13943:SF36, 1 hit
Pfamⁱ	View protein in Pfam PF04970 LRAT, 1 hit
ProtoNetⁱ	Search...

Entry informationⁱ

Entry nameⁱ	HRSL4_HUMAN
Accessionⁱ	Q9UL19Primary (citable) accession number: Q9UL19 Secondary accession number(s): B2R599 , B4DDW2, E7ENZ7, O95200
Entry historyⁱ	Integrated into UniProtKB/Swiss-Prot:	January 31, 2002
	Last sequence update:	May 1, 2000
	Last modified:	October 10, 2018
	This is version 131 of the entry and version 1 of the sequence. See complete history.
Entry statusⁱ	Reviewed (UniProtKB/Swiss-Prot)
Annotation program	Chordata Protein Annotation Program
Disclaimer	Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousⁱ

Keywords - Technical termⁱ

3D-structure, Complete proteome, Reference proteome

Documents

SIMILARITY comments
Index of protein domains and families
Human entries with polymorphisms or disease mutations
List of human entries with polymorphisms or disease mutations
Human polymorphisms and disease mutations
Index of human polymorphisms and disease mutations
MIM cross-references
Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
PDB cross-references
Index of Protein Data Bank (PDB) cross-references
Human chromosome 11
Human chromosome 11: entries, gene names and cross-references to MIM

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UniProtKB - Q9UL19 (HRSL4_HUMAN)

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Retinoic acid receptor responder protein 3

Select a section on the left to see content.

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>This subsection of the ‘Function’ section describes biophysical and chemical properties, such as maximal absorption, kinetic parameters, pH dependence, redox potentials and temperature dependence.<p><a href='/help/biophysicochemical_properties' target='_top'>More...</a></p>Kineticsi

pH dependencei

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

Chemistry databases

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

Organism-specific databases

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Other locations

Cytosol

Other locations

Topology

Keywords - Cellular componenti

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

Organism-specific databases

Polymorphism and mutation databases

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Proteomic databases

PTM databases

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

Secondary structure

3D structure databases

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Keywords - Domaini

Phylogenomic databases

Family and domain databases

Experimental Info

Natural variant

Alternative sequence

Sequence databases

Genome annotation databases

Keywords - Coding sequence diversityi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

<p>This subsection of the <a href="http://www.uniprot.org/manual/cross_references_section">Cross-references</a> section provides links to various web resources that are relevant for a specific protein.<p><a href='/help/web_resource' target='_top'>More...</a></p>Web resourcesi

Sequence databases

3D structure databases

Protein-protein interaction databases

Chemistry databases

PTM databases

Polymorphism and mutation databases

Proteomic databases

Protocols and materials databases

Genome annotation databases

Organism-specific databases

Phylogenomic databases

Enzyme and pathway databases

Miscellaneous databases

Gene expression databases

Family and domain databases

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

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Functionⁱ

Kineticsⁱ

pH dependenceⁱ

GO - Molecular functionⁱ

GO - Biological processⁱ

Names & Taxonomyⁱ

Subcellular locationⁱ

Keywords - Cellular componentⁱ

Pathology & Biotechⁱ

PTM / Processingⁱ

Expressionⁱ

Interactionⁱ

Structureⁱ

Family & Domainsⁱ

Sequence similaritiesⁱ

Keywords - Domainⁱ

Keywords - Coding sequence diversityⁱ

Cross-referencesⁱ

Web resourcesⁱ

Entry informationⁱ

Miscellaneousⁱ

Keywords - Technical termⁱ