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Protein

Zinc finger protein 580

Gene

ZNF580

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Involved in the regulation of endothelial cell proliferation and migration. Mediates H2O2-induced leukocyte chemotaxis by elevating interleukin-8 production and may play a role in inflammation. May be involved in transcriptional regulation.2 Publications

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri92 – 114C2H2-type 1PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri120 – 142C2H2-type 2PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri150 – 172C2H2-type 3PROSITE-ProRule annotationAdd BLAST23

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding
Biological processChemotaxis, Inflammatory response, Transcription, Transcription regulation
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
Zinc finger protein 580
Alternative name(s):
LDL-induced EC protein
Gene namesi
Name:ZNF580
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 19

Organism-specific databases

EuPathDBiHostDB:ENSG00000213015.8
HGNCiHGNC:29473 ZNF580
MIMi617888 gene
neXtProtiNX_Q9UK33

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000213015
PharmGKBiPA134867016

Polymorphism and mutation databases

BioMutaiZNF580
DMDMi55976777

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000476711 – 172Zinc finger protein 580Add BLAST172

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Cross-linki31Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)Combined sources
Cross-linki118Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)Combined sources

Keywords - PTMi

Isopeptide bond, Ubl conjugation

Proteomic databases

EPDiQ9UK33
MaxQBiQ9UK33
PaxDbiQ9UK33
PeptideAtlasiQ9UK33
PRIDEiQ9UK33
ProteomicsDBi84713

PTM databases

iPTMnetiQ9UK33
PhosphoSitePlusiQ9UK33

Expressioni

Tissue specificityi

Expressed in endothelial cells.1 Publication

Inductioni

Up-regulated in presence of reactive oxygen species (ROS), like H2O2, through the NF-kappaB signaling pathway. Up-regulated by sphingosine-1-phosphate (SP1) through the p38 MAPK signaling pathway (at protein level).2 Publications

Gene expression databases

BgeeiENSG00000213015 Expressed in 206 organ(s), highest expression level in left uterine tube
CleanExiHS_ZNF580
ExpressionAtlasiQ9UK33 baseline and differential
GenevisibleiQ9UK33 HS

Organism-specific databases

HPAiHPA054058

Interactioni

Subunit structurei

Interacts with SMAD2.1 Publication

Protein-protein interaction databases

BioGridi119340, 7 interactors
IntActiQ9UK33, 22 interactors
MINTiQ9UK33
STRINGi9606.ENSP00000320050

Structurei

3D structure databases

ProteinModelPortaliQ9UK33
SMRiQ9UK33
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi5 – 88Pro-richAdd BLAST84

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri92 – 114C2H2-type 1PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri120 – 142C2H2-type 2PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri150 – 172C2H2-type 3PROSITE-ProRule annotationAdd BLAST23

Keywords - Domaini

Repeat, Zinc-finger

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00920000149029
HOGENOMiHOG000059663
HOVERGENiHBG079385
InParanoidiQ9UK33
OMAiQSHRISH
OrthoDBiEOG091G0STS
PhylomeDBiQ9UK33
TreeFamiTF338348

Family and domain databases

InterProiView protein in InterPro
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF00096 zf-C2H2, 2 hits
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 3 hits
SUPFAMiSSF57667 SSF57667, 2 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 3 hits
PS50157 ZINC_FINGER_C2H2_2, 3 hits

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 3 potential isoforms that are computationally mapped.Show allAlign All

Q9UK33-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MLLLPPRPPH PRSSSPEAMD PPPPKAPPFP KAEGPSSTPS SAAGPRPPRL
60 70 80 90 100
GRHLLIDANG VPYTYTVQLE EEPRGPPQRE APPGEPGPRK GYSCPECARV
110 120 130 140 150
FASPLRLQSH RVSHSDLKPF TCGACGKAFK RSSHLSRHRA THRARAGPPH
160 170
TCPLCPRRFQ DAAELAQHVR LH
Length:172
Mass (Da):18,756
Last modified:May 1, 2000 - v1
Checksum:i55A89DD94E0440A8
GO

Computationally mapped potential isoform sequencesi

There are 3 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
K7ENY2K7ENY2_HUMAN
Zinc finger protein 580
ZNF580
104Annotation score:
K7ERU0K7ERU0_HUMAN
Zinc finger protein 580
ZNF580
103Annotation score:
K7EJ53K7EJ53_HUMAN
Zinc finger protein 580
ZNF580
22Annotation score:

Sequence cautioni

The sequence CAB94389 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF184939 mRNA Translation: AAD56549.1
AL359054 mRNA Translation: CAB94389.1 Different initiation.
AK314888 mRNA Translation: BAG37402.1
BC017698 mRNA Translation: AAH17698.1
CCDSiCCDS12931.1
RefSeqiNP_001156895.1, NM_001163423.1
NP_057286.1, NM_016202.2
NP_996998.1, NM_207115.1
UniGeneiHs.631551

Genome annotation databases

EnsembliENST00000325333; ENSP00000320050; ENSG00000213015
ENST00000543039; ENSP00000443957; ENSG00000213015
ENST00000545125; ENSP00000446126; ENSG00000213015
GeneIDi51157
KEGGihsa:51157
UCSCiuc002qlo.4 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF184939 mRNA Translation: AAD56549.1
AL359054 mRNA Translation: CAB94389.1 Different initiation.
AK314888 mRNA Translation: BAG37402.1
BC017698 mRNA Translation: AAH17698.1
CCDSiCCDS12931.1
RefSeqiNP_001156895.1, NM_001163423.1
NP_057286.1, NM_016202.2
NP_996998.1, NM_207115.1
UniGeneiHs.631551

3D structure databases

ProteinModelPortaliQ9UK33
SMRiQ9UK33
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi119340, 7 interactors
IntActiQ9UK33, 22 interactors
MINTiQ9UK33
STRINGi9606.ENSP00000320050

PTM databases

iPTMnetiQ9UK33
PhosphoSitePlusiQ9UK33

Polymorphism and mutation databases

BioMutaiZNF580
DMDMi55976777

Proteomic databases

EPDiQ9UK33
MaxQBiQ9UK33
PaxDbiQ9UK33
PeptideAtlasiQ9UK33
PRIDEiQ9UK33
ProteomicsDBi84713

Protocols and materials databases

DNASUi51157
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000325333; ENSP00000320050; ENSG00000213015
ENST00000543039; ENSP00000443957; ENSG00000213015
ENST00000545125; ENSP00000446126; ENSG00000213015
GeneIDi51157
KEGGihsa:51157
UCSCiuc002qlo.4 human

Organism-specific databases

CTDi51157
EuPathDBiHostDB:ENSG00000213015.8
GeneCardsiZNF580
HGNCiHGNC:29473 ZNF580
HPAiHPA054058
MIMi617888 gene
neXtProtiNX_Q9UK33
OpenTargetsiENSG00000213015
PharmGKBiPA134867016
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00920000149029
HOGENOMiHOG000059663
HOVERGENiHBG079385
InParanoidiQ9UK33
OMAiQSHRISH
OrthoDBiEOG091G0STS
PhylomeDBiQ9UK33
TreeFamiTF338348

Miscellaneous databases

GenomeRNAii51157
PROiPR:Q9UK33
SOURCEiSearch...

Gene expression databases

BgeeiENSG00000213015 Expressed in 206 organ(s), highest expression level in left uterine tube
CleanExiHS_ZNF580
ExpressionAtlasiQ9UK33 baseline and differential
GenevisibleiQ9UK33 HS

Family and domain databases

InterProiView protein in InterPro
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF00096 zf-C2H2, 2 hits
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 3 hits
SUPFAMiSSF57667 SSF57667, 2 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 3 hits
PS50157 ZINC_FINGER_C2H2_2, 3 hits
ProtoNetiSearch...

Entry informationi

Entry nameiZN580_HUMAN
AccessioniPrimary (citable) accession number: Q9UK33
Secondary accession number(s): B2RC05, Q9NPP7
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 23, 2004
Last sequence update: May 1, 2000
Last modified: November 7, 2018
This is version 146 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
  2. Human chromosome 19
    Human chromosome 19: entries, gene names and cross-references to MIM
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Main funding by: National Institutes of Health

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