UniProtKB - Q9T010 (P2C54_ARATH)
Protein
Probable protein phosphatase 2C 54
Gene
At4g11040
Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Functioni
Catalytic activityi
Cofactori
Mg2+By similarity, Mn2+By similarityNote: Binds 2 magnesium or manganese ions per subunit.By similarity
Sites
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Metal bindingi | 112 | Manganese 1By similarity | 1 | |
Metal bindingi | 112 | Manganese 2By similarity | 1 | |
Metal bindingi | 113 | Manganese 1; via carbonyl oxygenBy similarity | 1 | |
Metal bindingi | 228 | Manganese 2By similarity | 1 | |
Metal bindingi | 280 | Manganese 2By similarity | 1 |
GO - Molecular functioni
- metal ion binding Source: UniProtKB-KW
- phosphoprotein phosphatase activity Source: TAIR
- protein serine/threonine phosphatase activity Source: TAIR
- protein serine phosphatase activity Source: UniProtKB-EC
- protein threonine phosphatase activity Source: UniProtKB-EC
- pseudophosphatase activity Source: TAIR
GO - Biological processi
- positive regulation of seed dormancy process Source: TAIR
- seed dormancy process Source: TAIR
Keywordsi
Molecular function | Hydrolase, Protein phosphatase |
Ligand | Magnesium, Manganese, Metal-binding |
Names & Taxonomyi
Protein namesi | |
Gene namesi | Ordered Locus Names:At4g11040 ORF Names:F8M12.14, T22B4.20 |
Organismi | Arabidopsis thaliana (Mouse-ear cress) |
Taxonomic identifieri | 3702 [NCBI] |
Taxonomic lineagei | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliopsida › eudicotyledons › Gunneridae › Pentapetalae › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis |
Proteomesi |
|
Organism-specific databases
Araporti | AT4G11040 |
TAIRi | locus:2136153, AT4G11040 |
Subcellular locationi
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000367978 | 1 – 295 | Probable protein phosphatase 2C 54Add BLAST | 295 |
Proteomic databases
PaxDbi | Q9T010 |
PRIDEi | Q9T010 |
ProteomicsDBi | 248721 [Q9T010-1] |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 78 – 289 | PPM-type phosphatasePROSITE-ProRule annotationAdd BLAST | 212 |
Sequence similaritiesi
Belongs to the PP2C family.Curated
Phylogenomic databases
eggNOGi | KOG0698, Eukaryota |
HOGENOMi | CLU_082245_0_0_1 |
InParanoidi | Q9T010 |
OMAi | LYDKSPA |
PhylomeDBi | Q9T010 |
Family and domain databases
CDDi | cd00143, PP2Cc, 1 hit |
Gene3Di | 3.60.40.10, 2 hits |
InterProi | View protein in InterPro IPR036457, PPM-type_dom_sf IPR001932, PPM-type_phosphatase_dom |
Pfami | View protein in Pfam PF00481, PP2C, 1 hit |
SMARTi | View protein in SMART SM00332, PP2Cc, 1 hit |
SUPFAMi | SSF81606, SSF81606, 1 hit |
PROSITEi | View protein in PROSITE PS51746, PPM_2, 1 hit |
(1+)i Sequence
Sequence statusi: Complete.
This entry describes 1 produced by isoform ialternative splicing. AlignAdd to basketNote: A number of isoforms are produced. According to EST sequences.
This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All
Isoform 1 (identifier: Q9T010-1) [UniParc]FASTAAdd to basket
This isoform has been chosen as the sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. canonicali
10 20 30 40 50
MKTDTTLPII AEDGDCGDSK RVRVADSGYT VGGQDRPVKL PKIENNGDVG
60 70 80 90 100
TSEGTHVLVD ALMAEVAIKD KDGKTNAGHG VVSVMGRQRA MTTAVSTVVD
110 120 130 140 150
EIPSYDIFGI FDGLRLAKFF EDRLRRLVKE EVKACHGRGV AADWNKVMKS
160 170 180 190 200
CFSEAVGTVG TTTSAVVTIV GKEEVIVLCR GGARVVLYSH DGVALPLCHI
210 220 230 240 250
HHHKDGVEQI LKIHKRKKID DFIVLACDGL WDVVSDDDTY QLVKRCLYGK
260 270 280 290
LPPDGCISES SSTKAAVILA ELAIARGSKE NINVIVIDLK SSTVS
Computationally mapped potential isoform sequencesi
There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basketF4JN82 | F4JN82_ARATH | Protein phosphatase 2C family prote... | RDO5 REDUCED DORMANCY 5, At4g11040, T22B4.20, T22B4_20 | 218 | Annotation score: |
Sequence cautioni
The sequence AAC33957 differs from that shown. Reason: Erroneous gene model prediction.Curated
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AF080118 Genomic DNA Translation: AAC33957.1 Sequence problems. AL049876 Genomic DNA Translation: CAB43039.1 AL161518 Genomic DNA Translation: CAB81205.1 CP002687 Genomic DNA Translation: AEE82964.1 AY133684 mRNA Translation: AAM91618.1 |
PIRi | T01874 T08183 |
RefSeqi | NP_192842.1, NM_117174.3 [Q9T010-1] |
Genome annotation databases
EnsemblPlantsi | AT4G11040.1; AT4G11040.1; AT4G11040 [Q9T010-1] |
GeneIDi | 826705 |
Gramenei | AT4G11040.1; AT4G11040.1; AT4G11040 [Q9T010-1] |
KEGGi | ath:AT4G11040 |
Keywords - Coding sequence diversityi
Alternative splicingSimilar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AF080118 Genomic DNA Translation: AAC33957.1 Sequence problems. AL049876 Genomic DNA Translation: CAB43039.1 AL161518 Genomic DNA Translation: CAB81205.1 CP002687 Genomic DNA Translation: AEE82964.1 AY133684 mRNA Translation: AAM91618.1 |
PIRi | T01874 T08183 |
RefSeqi | NP_192842.1, NM_117174.3 [Q9T010-1] |
3D structure databases
SMRi | Q9T010 |
ModBasei | Search... |
Protein-protein interaction databases
STRINGi | 3702.AT4G11040.1 |
Proteomic databases
PaxDbi | Q9T010 |
PRIDEi | Q9T010 |
ProteomicsDBi | 248721 [Q9T010-1] |
Genome annotation databases
EnsemblPlantsi | AT4G11040.1; AT4G11040.1; AT4G11040 [Q9T010-1] |
GeneIDi | 826705 |
Gramenei | AT4G11040.1; AT4G11040.1; AT4G11040 [Q9T010-1] |
KEGGi | ath:AT4G11040 |
Organism-specific databases
Araporti | AT4G11040 |
TAIRi | locus:2136153, AT4G11040 |
Phylogenomic databases
eggNOGi | KOG0698, Eukaryota |
HOGENOMi | CLU_082245_0_0_1 |
InParanoidi | Q9T010 |
OMAi | LYDKSPA |
PhylomeDBi | Q9T010 |
Miscellaneous databases
PROi | PR:Q9T010 |
Gene expression databases
ExpressionAtlasi | Q9T010, baseline and differential |
Family and domain databases
CDDi | cd00143, PP2Cc, 1 hit |
Gene3Di | 3.60.40.10, 2 hits |
InterProi | View protein in InterPro IPR036457, PPM-type_dom_sf IPR001932, PPM-type_phosphatase_dom |
Pfami | View protein in Pfam PF00481, PP2C, 1 hit |
SMARTi | View protein in SMART SM00332, PP2Cc, 1 hit |
SUPFAMi | SSF81606, SSF81606, 1 hit |
PROSITEi | View protein in PROSITE PS51746, PPM_2, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | P2C54_ARATH | |
Accessioni | Q9T010Primary (citable) accession number: Q9T010 Secondary accession number(s): O81613 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | April 14, 2009 |
Last sequence update: | May 1, 2000 | |
Last modified: | February 10, 2021 | |
This is version 121 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Plant Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- Arabidopsis thaliana
Arabidopsis thaliana: entries and gene names - SIMILARITY comments
Index of protein domains and families