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UniProtKB - Q9SXD1 (PPR91_ARATH)
Protein
Pentatricopeptide repeat-containing protein At1g62670, mitochondrial
Gene
At1g62670
Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Functioni
GO - Molecular functioni
- RNA binding Source: TAIR
GO - Biological processi
- RNA 5'-end processing Source: TAIR
Names & Taxonomyi
Protein namesi | Recommended name: Pentatricopeptide repeat-containing protein At1g62670, mitochondrial |
Gene namesi | Ordered Locus Names:At1g62670 ORF Names:F23N19.4, T3P18.22 |
Organismi | Arabidopsis thaliana (Mouse-ear cress) |
Taxonomic identifieri | 3702 [NCBI] |
Taxonomic lineagei | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliopsida › eudicotyledons › Gunneridae › Pentapetalae › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis |
Proteomesi |
|
Organism-specific databases
Araporti | AT1G62670 |
TAIRi | locus:2026192, AT1G62670 |
Subcellular locationi
Mitochondrion
- Mitochondrion Curated
Mitochondrion
- mitochondrion Source: TAIR
Keywords - Cellular componenti
MitochondrionPTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Transit peptidei | 1 – 22 | MitochondrionSequence analysisAdd BLAST | 22 | |
ChainiPRO_0000342832 | 23 – 630 | Pentatricopeptide repeat-containing protein At1g62670, mitochondrialAdd BLAST | 608 |
Proteomic databases
PaxDbi | Q9SXD1 |
PRIDEi | Q9SXD1 |
ProteomicsDBi | 225985 |
Expressioni
Gene expression databases
ExpressionAtlasi | Q9SXD1, baseline and differential |
Genevisiblei | Q9SXD1, AT |
Interactioni
Protein-protein interaction databases
BioGRIDi | 27785, 1 interactor |
STRINGi | 3702.AT1G62670.1 |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Repeati | 44 – 79 | PPR 1Add BLAST | 36 | |
Repeati | 80 – 114 | PPR 2Add BLAST | 35 | |
Repeati | 115 – 149 | PPR 3Add BLAST | 35 | |
Repeati | 150 – 184 | PPR 4Add BLAST | 35 | |
Repeati | 185 – 219 | PPR 5Add BLAST | 35 | |
Repeati | 220 – 254 | PPR 6Add BLAST | 35 | |
Repeati | 255 – 289 | PPR 7Add BLAST | 35 | |
Repeati | 290 – 324 | PPR 8Add BLAST | 35 | |
Repeati | 325 – 359 | PPR 9Add BLAST | 35 | |
Repeati | 360 – 394 | PPR 10Add BLAST | 35 | |
Repeati | 395 – 429 | PPR 11Add BLAST | 35 | |
Repeati | 430 – 464 | PPR 12Add BLAST | 35 | |
Repeati | 465 – 499 | PPR 13Add BLAST | 35 | |
Repeati | 500 – 534 | PPR 14Add BLAST | 35 | |
Repeati | 535 – 569 | PPR 15Add BLAST | 35 | |
Repeati | 570 – 604 | PPR 16Add BLAST | 35 |
Sequence similaritiesi
Keywords - Domaini
Repeat, Transit peptidePhylogenomic databases
eggNOGi | KOG4197, Eukaryota |
HOGENOMi | CLU_002706_49_12_1 |
InParanoidi | Q9SXD1 |
OMAi | CKQGHTQ |
OrthoDBi | 1344243at2759 |
PhylomeDBi | Q9SXD1 |
Family and domain databases
Gene3Di | 1.25.40.10, 6 hits |
InterProi | View protein in InterPro IPR002885, Pentatricopeptide_repeat IPR011990, TPR-like_helical_dom_sf |
Pfami | View protein in Pfam PF12854, PPR_1, 1 hit PF13041, PPR_2, 7 hits |
TIGRFAMsi | TIGR00756, PPR, 14 hits |
PROSITEi | View protein in PROSITE PS51375, PPR, 16 hits |
i Sequence
Sequence statusi: Complete.
: The displayed sequence is further processed into a mature form. Sequence processingi
Q9SXD1-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MRISFAIAST AKRFVHRSLV VRGNAATVSP SFSFFWRRAF SGKTSYDYRE
60 70 80 90 100
KLSRNGLSEL KLDDAVALFG EMVKSRPFPS IIEFSKLLSA IAKMNKFDVV
110 120 130 140 150
ISLGEQMQNL GIPHNHYTYS ILINCFCRRS QLPLALAVLG KMMKLGYEPN
160 170 180 190 200
IVTLSSLLNG YCHSKRISEA VALVDQMFVT GYQPNTVTFN TLIHGLFLHN
210 220 230 240 250
KASEAMALID RMVAKGCQPD LVTYGVVVNG LCKRGDTDLA FNLLNKMEQG
260 270 280 290 300
KLEPGVLIYN TIIDGLCKYK HMDDALNLFK EMETKGIRPN VVTYSSLISC
310 320 330 340 350
LCNYGRWSDA SRLLSDMIER KINPDVFTFS ALIDAFVKEG KLVEAEKLYD
360 370 380 390 400
EMVKRSIDPS IVTYSSLING FCMHDRLDEA KQMFEFMVSK HCFPDVVTYN
410 420 430 440 450
TLIKGFCKYK RVEEGMEVFR EMSQRGLVGN TVTYNILIQG LFQAGDCDMA
460 470 480 490 500
QEIFKEMVSD GVPPNIMTYN TLLDGLCKNG KLEKAMVVFE YLQRSKMEPT
510 520 530 540 550
IYTYNIMIEG MCKAGKVEDG WDLFCNLSLK GVKPDVVAYN TMISGFCRKG
560 570 580 590 600
SKEEADALFK EMKEDGTLPN SGCYNTLIRA RLRDGDREAS AELIKEMRSC
610 620 630
GFAGDASTIG LVTNMLHDGR LDKSFLDMLS
Sequence cautioni
The sequence AAD43623 differs from that shown. Reason: Erroneous initiation.Curated
The sequence AAF19552 differs from that shown. Reason: Erroneous gene model prediction. The predicted gene has been split into 2 genes: At1g62670 and At1g62680.Curated
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AC005698 Genomic DNA Translation: AAD43623.1 Different initiation. AC007190 Genomic DNA Translation: AAF19552.1 Sequence problems. CP002684 Genomic DNA Translation: AEE33992.1 CP002684 Genomic DNA Translation: ANM59187.1 |
RefSeqi | NP_001319294.1, NM_001334047.1 NP_176454.1, NM_104944.1 |
Genome annotation databases
EnsemblPlantsi | AT1G62670.1; AT1G62670.1; AT1G62670 AT1G62670.2; AT1G62670.2; AT1G62670 |
GeneIDi | 842564 |
Gramenei | AT1G62670.1; AT1G62670.1; AT1G62670 AT1G62670.2; AT1G62670.2; AT1G62670 |
KEGGi | ath:AT1G62670 |
Similar proteinsi
Cross-referencesi
Web resourcesi
Pentatricopeptide repeat proteins |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AC005698 Genomic DNA Translation: AAD43623.1 Different initiation. AC007190 Genomic DNA Translation: AAF19552.1 Sequence problems. CP002684 Genomic DNA Translation: AEE33992.1 CP002684 Genomic DNA Translation: ANM59187.1 |
RefSeqi | NP_001319294.1, NM_001334047.1 NP_176454.1, NM_104944.1 |
3D structure databases
AlphaFoldDBi | Q9SXD1 |
SMRi | Q9SXD1 |
ModBasei | Search... |
Protein-protein interaction databases
BioGRIDi | 27785, 1 interactor |
STRINGi | 3702.AT1G62670.1 |
Proteomic databases
PaxDbi | Q9SXD1 |
PRIDEi | Q9SXD1 |
ProteomicsDBi | 225985 |
Genome annotation databases
EnsemblPlantsi | AT1G62670.1; AT1G62670.1; AT1G62670 AT1G62670.2; AT1G62670.2; AT1G62670 |
GeneIDi | 842564 |
Gramenei | AT1G62670.1; AT1G62670.1; AT1G62670 AT1G62670.2; AT1G62670.2; AT1G62670 |
KEGGi | ath:AT1G62670 |
Organism-specific databases
Araporti | AT1G62670 |
TAIRi | locus:2026192, AT1G62670 |
Phylogenomic databases
eggNOGi | KOG4197, Eukaryota |
HOGENOMi | CLU_002706_49_12_1 |
InParanoidi | Q9SXD1 |
OMAi | CKQGHTQ |
OrthoDBi | 1344243at2759 |
PhylomeDBi | Q9SXD1 |
Miscellaneous databases
PROi | PR:Q9SXD1 |
Gene expression databases
ExpressionAtlasi | Q9SXD1, baseline and differential |
Genevisiblei | Q9SXD1, AT |
Family and domain databases
Gene3Di | 1.25.40.10, 6 hits |
InterProi | View protein in InterPro IPR002885, Pentatricopeptide_repeat IPR011990, TPR-like_helical_dom_sf |
Pfami | View protein in Pfam PF12854, PPR_1, 1 hit PF13041, PPR_2, 7 hits |
TIGRFAMsi | TIGR00756, PPR, 14 hits |
PROSITEi | View protein in PROSITE PS51375, PPR, 16 hits |
MobiDBi | Search... |
Entry informationi
Entry namei | PPR91_ARATH | |
Accessioni | Q9SXD1Primary (citable) accession number: Q9SXD1 Secondary accession number(s): Q9SI82 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | July 1, 2008 |
Last sequence update: | July 1, 2008 | |
Last modified: | May 25, 2022 | |
This is version 108 of the entry and version 2 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Plant Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- Arabidopsis thaliana
Arabidopsis thaliana: entries and gene names - SIMILARITY comments
Index of protein domains and families