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Entry version 144 (31 Jul 2019)
Sequence version 1 (01 May 2000)
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Protein

G-type lectin S-receptor-like serine/threonine-protein kinase At1g11280

Gene

At1g11280

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at transcript leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section describes the catalytic activity of an enzyme, i.e. a chemical reaction that the enzyme catalyzes.<p><a href='/help/catalytic_activity' target='_top'>More...</a></p>Catalytic activityi

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section describes the interaction between a single amino acid and another chemical entity. Priority is given to the annotation of physiological ligands.<p><a href='/help/binding' target='_top'>More...</a></p>Binding sitei533ATPPROSITE-ProRule annotation1
<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section is used for enzymes and indicates the residues directly involved in catalysis.<p><a href='/help/act_site' target='_top'>More...</a></p>Active sitei630Proton acceptorPROSITE-ProRule annotation1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section describes a region in the protein which binds nucleotide phosphates. It always involves more than one amino acid and includes all residues involved in nucleotide-binding.<p><a href='/help/np_bind' target='_top'>More...</a></p>Nucleotide bindingi511 – 519ATPPROSITE-ProRule annotation9

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionKinase, Receptor, Serine/threonine-protein kinase, Transferase
LigandATP-binding, Lectin, Nucleotide-binding

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
G-type lectin S-receptor-like serine/threonine-protein kinase At1g11280 (EC:2.7.11.1)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Ordered Locus Names:At1g11280
ORF Names:T28P6.7
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiArabidopsis thaliana (Mouse-ear cress)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri3702 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliopsidaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000006548 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 1

Organism-specific databases

Arabidopsis Information Portal

More...
Araporti
AT1G11280

The Arabidopsis Information Resource

More...
TAIRi
locus:2202089 AT1G11280

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular_location_section">'Subcellular location'</a> section describes the subcellular compartment where each non-membrane region of a membrane-spanning protein is found.<p><a href='/help/topo_dom' target='_top'>More...</a></p>Topological domaini29 – 434ExtracellularSequence analysisAdd BLAST406
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular_location_section">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei435 – 455HelicalSequence analysisAdd BLAST21
Topological domaini456 – 820CytoplasmicSequence analysisAdd BLAST365

Keywords - Cellular componenti

Cell membrane, Membrane

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section denotes the presence of an N-terminal signal peptide.<p><a href='/help/signal' target='_top'>More...</a></p>Signal peptidei1 – 28Sequence analysisAdd BLAST28
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_000040130629 – 820G-type lectin S-receptor-like serine/threonine-protein kinase At1g11280Add BLAST792

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/ptm_processing_section">PTM / Processing</a> section specifies the position and type of each covalently attached glycan group (mono-, di-, or polysaccharide).<p><a href='/help/carbohyd' target='_top'>More...</a></p>Glycosylationi57N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi92N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi98N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi241N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi272N-linked (GlcNAc...) asparagineSequence analysis1
<p>This subsection of the PTM / Processing":/help/ptm_processing_section section describes the positions of cysteine residues participating in disulfide bonds.<p><a href='/help/disulfid' target='_top'>More...</a></p>Disulfide bondi287 ↔ 299By similarity
Disulfide bondi293 ↔ 307By similarity
Glycosylationi325N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi341N-linked (GlcNAc...) asparagineSequence analysis1
Disulfide bondi377 ↔ 398By similarity
Disulfide bondi381 ↔ 387By similarity
Glycosylationi384N-linked (GlcNAc...) asparagineSequence analysis1
<p>This subsection of the ‘PTM / Processing’ section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei539PhosphoserineBy similarity1
Modified residuei554PhosphoserineBy similarity1
Modified residuei634PhosphoserineBy similarity1
Modified residuei647PhosphoserineBy similarity1
Modified residuei664PhosphothreonineBy similarity1
Modified residuei707PhosphoserineBy similarity1
Modified residuei708PhosphoserineBy similarity1
Modified residuei808PhosphoserineBy similarity1
Modified residuei815PhosphothreonineBy similarity1

Keywords - PTMi

Disulfide bond, Glycoprotein, Phosphoprotein

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q9SXB3

PRoteomics IDEntifications database

More...
PRIDEi
Q9SXB3

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q9SXB3 baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q9SXB3 AT

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

GO - Molecular functioni

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q9SXB3

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini29 – 148Bulb-type lectinPROSITE-ProRule annotationAdd BLAST120
Domaini283 – 319EGF-likeAdd BLAST37
Domaini338 – 422PANPROSITE-ProRule annotationAdd BLAST85
Domaini505 – 792Protein kinasePROSITE-ProRule annotationAdd BLAST288

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni594 – 611CaM-bindingBy similarityAdd BLAST18

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.PROSITE-ProRule annotation

Keywords - Domaini

EGF-like domain, Signal, Transmembrane, Transmembrane helix

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG410IH0T Eukaryota
COG0515 LUCA

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000116559

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q9SXB3

Database of Orthologous Groups

More...
OrthoDBi
407794at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q9SXB3

Family and domain databases

Conserved Domains Database

More...
CDDi
cd00028 B_lectin, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
2.90.10.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR001480 Bulb-type_lectin_dom
IPR036426 Bulb-type_lectin_dom_sf
IPR011009 Kinase-like_dom_sf
IPR003609 Pan_app
IPR000719 Prot_kinase_dom
IPR021820 S-locus_recpt_kinase_C
IPR000858 S_locus_glycoprot_dom
IPR001245 Ser-Thr/Tyr_kinase_cat_dom
IPR008271 Ser/Thr_kinase_AS
IPR024171 SRK-like_kinase

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF01453 B_lectin, 1 hit
PF11883 DUF3403, 1 hit
PF08276 PAN_2, 1 hit
PF07714 Pkinase_Tyr, 1 hit
PF00954 S_locus_glycop, 1 hit

PIRSF; a whole-protein classification database

More...
PIRSFi
PIRSF000641 SRK, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00108 B_lectin, 1 hit
SM00473 PAN_AP, 1 hit
SM00220 S_TKc, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF51110 SSF51110, 1 hit
SSF56112 SSF56112, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50927 BULB_LECTIN, 1 hit
PS50948 PAN, 1 hit
PS50011 PROTEIN_KINASE_DOM, 1 hit
PS00108 PROTEIN_KINASE_ST, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (3+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is in its mature form or if it represents the precursor.<p><a href='/help/sequence_processing' target='_top'>More...</a></p>Sequence processingi: The displayed sequence is further processed into a mature form.

This entry describes 3 <p>This subsection of the ‘Sequence’ section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 3 described isoforms and 2 potential isoforms that are computationally mapped.Show allAlign All

Isoform 1 (identifier: Q9SXB3-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MGIHLGEIGI VLFPWFLWLS LFLSCGYAAI TISSPLTLGQ TLSSPGGFYE
60 70 80 90 100
LGFFSPNNSQ NQYVGIWFKK ITPRVVVWVA NREKPITTPV ANLTISRNGS
110 120 130 140 150
LILLDSSKNV VWSTRRPSIS NKCHAKLLDT GNLVIVDDVS ENLLWQSFEN
160 170 180 190 200
PGDTMLPYSS LMYNLATGEK RVLSSWKSHT DPSPGDFVVR LTPQVPAQIV
210 220 230 240 250
TMRGSSVYKR SGPWAKTGFT GVPLMDESYT SPFSLSQDVG NGTGLFSYLQ
260 270 280 290 300
RSSELTRVII TSEGYLKTFR YNGTGWVLDF ITPANLCDLY GACGPFGLCV
310 320 330 340 350
TSNPTKCKCM KGFVPKYKEE WKRGNMTSGC MRRTELSCQA NLSTKTQGKG
360 370 380 390 400
VDVFYRLANV KPPDLYEYAS FVDADQCHQG CLSNCSCSAF AYITGIGCLL
410 420 430 440 450
WNHELIDTIR YSVGGEFLSI RLASSELAGS RRTKIIVGSI SLSIFVILAF
460 470 480 490 500
GSYKYWRYRA KQNVGPTWAF FNNSQDSWKN GLEPQEISGL TFFEMNTIRA
510 520 530 540 550
ATNNFNVSNK LGQGGFGPVY KGTLSDKKDI AVKRLSSSSG QGTEEFMNEI
560 570 580 590 600
KLISKLQHRN LVRLLGCCID GEEKLLIYEF LVNKSLDTFL FDLTLKLQID
610 620 630 640 650
WPKRFNIIQG VSRGLLYLHR DSCMRVIHRD LKVSNILLDD KMNPKISDFG
660 670 680 690 700
LARMFQGTQH QDNTRKVVGT LGYMSPEYAW TGMFSEKSDI YAFGVLLLEI
710 720 730 740 750
ISGKKISSFC CGEEGKTLLG HAWECWLETG GVDLLDEDIS SSCSPVEVEV
760 770 780 790 800
ARCVQIGLLC IQQQAVDRPN IAQVVTMMTS ATDLPRPKQP LFALQIQDQE
810 820
SVVSVSKSVN HVTQTEIYGR
Length:820
Mass (Da):91,337
Last modified:May 1, 2000 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iC91D361C956EDFBE
GO
Isoform 2 (identifier: Q9SXB3-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-1: M → MDLKENSFEHM

Note: No experimental confirmation available.
Show »
Length:830
Mass (Da):92,568
Checksum:i55E6F5AD920F5EF2
GO
Isoform 3 (identifier: Q9SXB3-3) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     464-475: Missing.

Note: No experimental confirmation available.
Show »
Length:808
Mass (Da):89,987
Checksum:iABCBBCF1884789E0
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
F4I7F8F4I7F8_ARATH
Receptor-like serine/threonine-prot...
At1g11280, T28P6.7, T28P6_7
818Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A1P8AW73A0A1P8AW73_ARATH
S-locus lectin protein kinase famil...
At1g11280, T28P6.7, T28P6_7
671Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti15W → C in AAN60272 (Ref. 1) Curated1
Sequence conflicti60Q → H in AAN60272 (Ref. 1) Curated1
Sequence conflicti88T → N in AAN60272 (Ref. 1) Curated1
Sequence conflicti409I → V in AAN60272 (Ref. 1) Curated1
Sequence conflicti430S → N in AAN60272 (Ref. 1) Curated1
Sequence conflicti500A → T in AAN60272 (Ref. 1) Curated1
Sequence conflicti594T → A in AAL07099 (PubMed:14593172).Curated1
Sequence conflicti640D → E in AAN60272 (Ref. 1) Curated1
Sequence conflicti661 – 666QDNTRK → KTTLVR in AAN60272 (Ref. 1) Curated6
Sequence conflicti766V → I in AAN60272 (Ref. 1) Curated1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_0401521M → MDLKENSFEHM in isoform 2. 1 Publication1
Alternative sequenceiVSP_040153464 – 475Missing in isoform 3. 1 PublicationAdd BLAST12

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AF083714 mRNA Translation: AAN60272.1
AC007259 Genomic DNA Translation: AAD49994.1
CP002684 Genomic DNA Translation: AEE28709.1
CP002684 Genomic DNA Translation: AEE28710.1
CP002684 Genomic DNA Translation: AEE28711.1
AY056250 mRNA Translation: AAL07099.1
AY062482 mRNA Translation: AAL32560.1

Protein sequence database of the Protein Information Resource

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PIRi
G86246

NCBI Reference Sequences

More...
RefSeqi
NP_563887.1, NM_101001.3 [Q9SXB3-2]
NP_849636.1, NM_179305.3 [Q9SXB3-1]
NP_849637.1, NM_179306.2 [Q9SXB3-3]

Genome annotation databases

Ensembl plant genome annotation project

More...
EnsemblPlantsi
AT1G11280.1; AT1G11280.1; AT1G11280 [Q9SXB3-2]
AT1G11280.2; AT1G11280.2; AT1G11280 [Q9SXB3-1]
AT1G11280.3; AT1G11280.3; AT1G11280 [Q9SXB3-3]

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
837670

Gramene; a comparative resource for plants

More...
Gramenei
AT1G11280.1; AT1G11280.1; AT1G11280 [Q9SXB3-2]
AT1G11280.2; AT1G11280.2; AT1G11280 [Q9SXB3-1]
AT1G11280.3; AT1G11280.3; AT1G11280 [Q9SXB3-3]

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
ath:AT1G11280

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

<p>This subsection of the <a href="http://www.uniprot.org/manual/cross_references_section">Cross-references</a> section provides links to various web resources that are relevant for a specific protein.<p><a href='/help/web_resource' target='_top'>More...</a></p>Web resourcesi

PlantP kinase Classification PPC

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF083714 mRNA Translation: AAN60272.1
AC007259 Genomic DNA Translation: AAD49994.1
CP002684 Genomic DNA Translation: AEE28709.1
CP002684 Genomic DNA Translation: AEE28710.1
CP002684 Genomic DNA Translation: AEE28711.1
AY056250 mRNA Translation: AAL07099.1
AY062482 mRNA Translation: AAL32560.1
PIRiG86246
RefSeqiNP_563887.1, NM_101001.3 [Q9SXB3-2]
NP_849636.1, NM_179305.3 [Q9SXB3-1]
NP_849637.1, NM_179306.2 [Q9SXB3-3]

3D structure databases

SMRiQ9SXB3
ModBaseiSearch...

Proteomic databases

PaxDbiQ9SXB3
PRIDEiQ9SXB3

Genome annotation databases

EnsemblPlantsiAT1G11280.1; AT1G11280.1; AT1G11280 [Q9SXB3-2]
AT1G11280.2; AT1G11280.2; AT1G11280 [Q9SXB3-1]
AT1G11280.3; AT1G11280.3; AT1G11280 [Q9SXB3-3]
GeneIDi837670
GrameneiAT1G11280.1; AT1G11280.1; AT1G11280 [Q9SXB3-2]
AT1G11280.2; AT1G11280.2; AT1G11280 [Q9SXB3-1]
AT1G11280.3; AT1G11280.3; AT1G11280 [Q9SXB3-3]
KEGGiath:AT1G11280

Organism-specific databases

AraportiAT1G11280
TAIRilocus:2202089 AT1G11280

Phylogenomic databases

eggNOGiENOG410IH0T Eukaryota
COG0515 LUCA
HOGENOMiHOG000116559
InParanoidiQ9SXB3
OrthoDBi407794at2759
PhylomeDBiQ9SXB3

Miscellaneous databases

Protein Ontology

More...
PROi
PR:Q9SXB3

Gene expression databases

ExpressionAtlasiQ9SXB3 baseline and differential
GenevisibleiQ9SXB3 AT

Family and domain databases

CDDicd00028 B_lectin, 1 hit
Gene3Di2.90.10.10, 1 hit
InterProiView protein in InterPro
IPR001480 Bulb-type_lectin_dom
IPR036426 Bulb-type_lectin_dom_sf
IPR011009 Kinase-like_dom_sf
IPR003609 Pan_app
IPR000719 Prot_kinase_dom
IPR021820 S-locus_recpt_kinase_C
IPR000858 S_locus_glycoprot_dom
IPR001245 Ser-Thr/Tyr_kinase_cat_dom
IPR008271 Ser/Thr_kinase_AS
IPR024171 SRK-like_kinase
PfamiView protein in Pfam
PF01453 B_lectin, 1 hit
PF11883 DUF3403, 1 hit
PF08276 PAN_2, 1 hit
PF07714 Pkinase_Tyr, 1 hit
PF00954 S_locus_glycop, 1 hit
PIRSFiPIRSF000641 SRK, 1 hit
SMARTiView protein in SMART
SM00108 B_lectin, 1 hit
SM00473 PAN_AP, 1 hit
SM00220 S_TKc, 1 hit
SUPFAMiSSF51110 SSF51110, 1 hit
SSF56112 SSF56112, 1 hit
PROSITEiView protein in PROSITE
PS50927 BULB_LECTIN, 1 hit
PS50948 PAN, 1 hit
PS50011 PROTEIN_KINASE_DOM, 1 hit
PS00108 PROTEIN_KINASE_ST, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiY1112_ARATH
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q9SXB3
Secondary accession number(s): Q3EDE4, Q8H7E6, Q93ZU9
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 30, 2010
Last sequence update: May 1, 2000
Last modified: July 31, 2019
This is version 144 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
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