UniProtKB - Q9SUM3 (NCPR2_ARATH)
Protein
NADPH--cytochrome P450 reductase 2
Gene
ATR2
Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Functioni
This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes. It can also provide electron transfer to heme oxygenase and cytochrome B5. Reduces a variety of substrates in vitro, such as cytochrome c, feericyanide and dichloroindophenol.UniRule annotation5 Publications
Catalytic activityi
- EC:1.6.2.4UniRule annotation
Cofactori
Protein has several cofactor binding sites:- FADUniRule annotation1 PublicationNote: Binds 1 FAD per monomer.UniRule annotation
- FMNUniRule annotation1 PublicationNote: Binds 1 FMN per monomer.UniRule annotation
Kineticsi
- KM=23 µM for NADPH (at pH 7.7 and 28 degrees Celsius)4 Publications
- KM=2.0 µM for NADPH (at pH 7.25 and 25 degrees Celsius)4 Publications
- KM=15 µM for cytochrome c (at pH 7.7 and 30 degrees Celsius)4 Publications
- KM=16 µM for cytochrome c (at pH 7.0 and 25 degrees Celsius)4 Publications
- KM=22.5 µM for cytochrome c (at pH 7.7 and 28 degrees Celsius)4 Publications
Sites
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Binding sitei | 239 | FMNUniRule annotation | 1 | |
Binding sitei | 330 | NADPUniRule annotation | 1 | |
Binding sitei | 570 | NADPUniRule annotation | 1 | |
Binding sitei | 673 | NADPUniRule annotation | 1 | |
Binding sitei | 711 | FADUniRule annotation | 1 |
Regions
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Nucleotide bindingi | 111 – 116 | FMNUniRule annotation | 6 | |
Nucleotide bindingi | 166 – 169 | FMNUniRule annotation | 4 | |
Nucleotide bindingi | 204 – 213 | FMNUniRule annotation | 10 | |
Nucleotide bindingi | 489 – 492 | FADUniRule annotation | 4 | |
Nucleotide bindingi | 507 – 509 | FADUniRule annotation | 3 | |
Nucleotide bindingi | 523 – 526 | FADUniRule annotation | 4 | |
Nucleotide bindingi | 631 – 632 | NADPUniRule annotation | 2 | |
Nucleotide bindingi | 637 – 641 | NADPUniRule annotation | 5 |
GO - Molecular functioni
- flavin adenine dinucleotide binding Source: GO_Central
- FMN binding Source: GO_Central
- NADP binding Source: UniProtKB-UniRule
- NADPH-hemoprotein reductase activity Source: UniProtKB
- oxidoreductase activity Source: GO_Central
- oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen Source: GO_Central
GO - Biological processi
- phenylpropanoid metabolic process Source: UniProtKB
Keywordsi
Molecular function | Oxidoreductase |
Biological process | Phenylpropanoid metabolism |
Ligand | FAD, Flavoprotein, FMN, NADP |
Enzyme and pathway databases
BioCyci | MetaCyc:MONOMER-2102 |
Names & Taxonomyi
Protein namesi | Recommended name: NADPH--cytochrome P450 reductase 2UniRule annotation (EC:1.6.2.4UniRule annotation)Short name: CPR 2UniRule annotation Short name: P450R 2UniRule annotation |
Gene namesi | Name:ATR2 Synonyms:AR2 Ordered Locus Names:At4g30210 ORF Names:F9N11.60 |
Organismi | Arabidopsis thaliana (Mouse-ear cress) |
Taxonomic identifieri | 3702 [NCBI] |
Taxonomic lineagei | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliopsida › eudicotyledons › Gunneridae › Pentapetalae › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis |
Proteomesi |
|
Organism-specific databases
Araporti | AT4G30210 |
TAIRi | locus:2128951, AT4G30210 |
Subcellular locationi
Endoplasmic reticulum
- Endoplasmic reticulum membrane UniRule annotation; Single-pass membrane protein UniRule annotation; Cytoplasmic side UniRule annotation
Chloroplast
- chloroplast Source: TAIR
Cytosol
- cytosol Source: GO_Central
Endoplasmic reticulum
- endoplasmic reticulum Source: UniProtKB
- endoplasmic reticulum membrane Source: UniProtKB-SubCell
Plasma Membrane
- plasma membrane Source: TAIR
Other locations
- integral component of membrane Source: UniProtKB-KW
Topology
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Topological domaini | 1 – 51 | LumenalUniRule annotationAdd BLAST | 51 | |
Transmembranei | 52 – 72 | HelicalUniRule annotationAdd BLAST | 21 | |
Topological domaini | 73 – 711 | CytoplasmicUniRule annotationAdd BLAST | 639 |
Keywords - Cellular componenti
Endoplasmic reticulum, MembranePTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000416840 | 1 – 711 | NADPH--cytochrome P450 reductase 2Add BLAST | 711 |
Proteomic databases
PaxDbi | Q9SUM3 |
PRIDEi | Q9SUM3 |
ProteomicsDBi | 251241 [Q9SUM3-1] |
PTM databases
iPTMneti | Q9SUM3 |
Expressioni
Tissue specificityi
Expressed in roots, leaves, stems, flowers and siliques.1 Publication
Inductioni
By wounding and transition from dark to light.1 Publication
Gene expression databases
ExpressionAtlasi | Q9SUM3, baseline and differential |
Genevisiblei | Q9SUM3, AT |
Structurei
Secondary structure
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details3D structure databases
SMRi | Q9SUM3 |
ModBasei | Search... |
PDBe-KBi | Search... |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 105 – 255 | Flavodoxin-likeUniRule annotationAdd BLAST | 151 | |
Domaini | 310 – 556 | FAD-binding FR-typeUniRule annotationAdd BLAST | 247 |
Sequence similaritiesi
Belongs to the NADPH--cytochrome P450 reductase family.UniRule annotation
In the N-terminal section; belongs to the flavodoxin family.UniRule annotation
In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.UniRule annotation
Keywords - Domaini
Transmembrane, Transmembrane helixPhylogenomic databases
eggNOGi | KOG1158, Eukaryota |
HOGENOMi | CLU_001570_17_3_1 |
InParanoidi | Q9SUM3 |
PhylomeDBi | Q9SUM3 |
Family and domain databases
Gene3Di | 1.20.990.10, 1 hit 3.40.50.360, 1 hit 3.40.50.80, 1 hit |
HAMAPi | MF_03212, NCPR, 1 hit |
InterProi | View protein in InterPro IPR003097, CysJ-like_FAD-binding IPR017927, FAD-bd_FR_type IPR001094, Flavdoxin-like IPR008254, Flavodoxin/NO_synth IPR001709, Flavoprot_Pyr_Nucl_cyt_Rdtase IPR029039, Flavoprotein-like_sf IPR039261, FNR_nucleotide-bd IPR023173, NADPH_Cyt_P450_Rdtase_alpha IPR001433, OxRdtase_FAD/NAD-bd IPR023208, P450R IPR017938, Riboflavin_synthase-like_b-brl |
Pfami | View protein in Pfam PF00667, FAD_binding_1, 1 hit PF00258, Flavodoxin_1, 1 hit PF00175, NAD_binding_1, 1 hit |
PIRSFi | PIRSF000208, P450R, 1 hit |
PRINTSi | PR00369, FLAVODOXIN PR00371, FPNCR |
SUPFAMi | SSF52218, SSF52218, 1 hit SSF52343, SSF52343, 1 hit SSF63380, SSF63380, 1 hit |
PROSITEi | View protein in PROSITE PS51384, FAD_FR, 1 hit PS50902, FLAVODOXIN_LIKE, 1 hit |
s (2+)i Sequence
Sequence statusi: Complete.
This entry describes 2 produced by isoformsialternative splicing. AlignAdd to basketThis entry has 2 described isoforms and 1 potential isoform that is computationally mapped.Show allAlign All
Isoform 1 (identifier: Q9SUM3-1) [UniParc]FASTAAdd to basket
This isoform has been chosen as the sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. canonicali
10 20 30 40 50
MSSSSSSSTS MIDLMAAIIK GEPVIVSDPA NASAYESVAA ELSSMLIENR
60 70 80 90 100
QFAMIVTTSI AVLIGCIVML VWRRSGSGNS KRVEPLKPLV IKPREEEIDD
110 120 130 140 150
GRKKVTIFFG TQTGTAEGFA KALGEEAKAR YEKTRFKIVD LDDYAADDDE
160 170 180 190 200
YEEKLKKEDV AFFFLATYGD GEPTDNAARF YKWFTEGNDR GEWLKNLKYG
210 220 230 240 250
VFGLGNRQYE HFNKVAKVVD DILVEQGAQR LVQVGLGDDD QCIEDDFTAW
260 270 280 290 300
REALWPELDT ILREEGDTAV ATPYTAAVLE YRVSIHDSED AKFNDINMAN
310 320 330 340 350
GNGYTVFDAQ HPYKANVAVK RELHTPESDR SCIHLEFDIA GSGLTYETGD
360 370 380 390 400
HVGVLCDNLS ETVDEALRLL DMSPDTYFSL HAEKEDGTPI SSSLPPPFPP
410 420 430 440 450
CNLRTALTRY ACLLSSPKKS ALVALAAHAS DPTEAERLKH LASPAGKDEY
460 470 480 490 500
SKWVVESQRS LLEVMAEFPS AKPPLGVFFA GVAPRLQPRF YSISSSPKIA
510 520 530 540 550
ETRIHVTCAL VYEKMPTGRI HKGVCSTWMK NAVPYEKSEN CSSAPIFVRQ
560 570 580 590 600
SNFKLPSDSK VPIIMIGPGT GLAPFRGFLQ ERLALVESGV ELGPSVLFFG
610 620 630 640 650
CRNRRMDFIY EEELQRFVES GALAELSVAF SREGPTKEYV QHKMMDKASD
660 670 680 690 700
IWNMISQGAY LYVCGDAKGM ARDVHRSLHT IAQEQGSMDS TKAEGFVKNL
710
QTSGRYLRDV W
Computationally mapped potential isoform sequencesi
There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basketA0A1P8B3S1 | A0A1P8B3S1_ARATH | NADPH--cytochrome P450 reductase | ATR2 AR2, P450 reductase 2, At4g30210, F9N11.60, F9N11_60 | 774 | Annotation score: |
Experimental Info
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Sequence conflicti | 297 – 298 | NM → TL in CAA46815 (PubMed:9235908).Curated | 2 | |
Sequence conflicti | 346 – 348 | YET → MKL in CAA46815 (PubMed:9235908).Curated | 3 | |
Sequence conflicti | 540 – 544 | NCSSA → KLFLGR in CAA46815 (PubMed:9235908).Curated | 5 |
Alternative sequence
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Alternative sequenceiVSP_042906 | 447 | K → KV in isoform 2. Curated | 1 |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | X66017 mRNA Translation: CAA46815.1 AL109796 Genomic DNA Translation: CAB52465.1 AL161576 Genomic DNA Translation: CAB81014.1 CP002687 Genomic DNA Translation: AEE85737.1 CP002687 Genomic DNA Translation: AEE85738.1 AF325101 mRNA Translation: AAK17169.1 |
PIRi | S21531 T14081 |
RefSeqi | NP_194750.1, NM_119167.4 [Q9SUM3-1] NP_849472.2, NM_179141.2 [Q9SUM3-2] |
Genome annotation databases
EnsemblPlantsi | AT4G30210.1; AT4G30210.1; AT4G30210 [Q9SUM3-2] AT4G30210.2; AT4G30210.2; AT4G30210 [Q9SUM3-1] |
GeneIDi | 829144 |
Gramenei | AT4G30210.1; AT4G30210.1; AT4G30210 [Q9SUM3-2] AT4G30210.2; AT4G30210.2; AT4G30210 [Q9SUM3-1] |
KEGGi | ath:AT4G30210 |
Keywords - Coding sequence diversityi
Alternative splicingSimilar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | X66017 mRNA Translation: CAA46815.1 AL109796 Genomic DNA Translation: CAB52465.1 AL161576 Genomic DNA Translation: CAB81014.1 CP002687 Genomic DNA Translation: AEE85737.1 CP002687 Genomic DNA Translation: AEE85738.1 AF325101 mRNA Translation: AAK17169.1 |
PIRi | S21531 T14081 |
RefSeqi | NP_194750.1, NM_119167.4 [Q9SUM3-1] NP_849472.2, NM_179141.2 [Q9SUM3-2] |
3D structure databases
Select the link destinations: PDBei RCSB PDBi PDBji Links Updated | PDB entry | Method | Resolution (Å) | Chain | Positions | PDBsum |
5GXU | X-ray | 2.30 | A/B | 73-711 | [»] | |
SMRi | Q9SUM3 | |||||
ModBasei | Search... | |||||
PDBe-KBi | Search... |
Protein-protein interaction databases
STRINGi | 3702.AT4G30210.1 |
PTM databases
iPTMneti | Q9SUM3 |
Proteomic databases
PaxDbi | Q9SUM3 |
PRIDEi | Q9SUM3 |
ProteomicsDBi | 251241 [Q9SUM3-1] |
Genome annotation databases
EnsemblPlantsi | AT4G30210.1; AT4G30210.1; AT4G30210 [Q9SUM3-2] AT4G30210.2; AT4G30210.2; AT4G30210 [Q9SUM3-1] |
GeneIDi | 829144 |
Gramenei | AT4G30210.1; AT4G30210.1; AT4G30210 [Q9SUM3-2] AT4G30210.2; AT4G30210.2; AT4G30210 [Q9SUM3-1] |
KEGGi | ath:AT4G30210 |
Organism-specific databases
Araporti | AT4G30210 |
TAIRi | locus:2128951, AT4G30210 |
Phylogenomic databases
eggNOGi | KOG1158, Eukaryota |
HOGENOMi | CLU_001570_17_3_1 |
InParanoidi | Q9SUM3 |
PhylomeDBi | Q9SUM3 |
Enzyme and pathway databases
BioCyci | MetaCyc:MONOMER-2102 |
Miscellaneous databases
PROi | PR:Q9SUM3 |
Gene expression databases
ExpressionAtlasi | Q9SUM3, baseline and differential |
Genevisiblei | Q9SUM3, AT |
Family and domain databases
Gene3Di | 1.20.990.10, 1 hit 3.40.50.360, 1 hit 3.40.50.80, 1 hit |
HAMAPi | MF_03212, NCPR, 1 hit |
InterProi | View protein in InterPro IPR003097, CysJ-like_FAD-binding IPR017927, FAD-bd_FR_type IPR001094, Flavdoxin-like IPR008254, Flavodoxin/NO_synth IPR001709, Flavoprot_Pyr_Nucl_cyt_Rdtase IPR029039, Flavoprotein-like_sf IPR039261, FNR_nucleotide-bd IPR023173, NADPH_Cyt_P450_Rdtase_alpha IPR001433, OxRdtase_FAD/NAD-bd IPR023208, P450R IPR017938, Riboflavin_synthase-like_b-brl |
Pfami | View protein in Pfam PF00667, FAD_binding_1, 1 hit PF00258, Flavodoxin_1, 1 hit PF00175, NAD_binding_1, 1 hit |
PIRSFi | PIRSF000208, P450R, 1 hit |
PRINTSi | PR00369, FLAVODOXIN PR00371, FPNCR |
SUPFAMi | SSF52218, SSF52218, 1 hit SSF52343, SSF52343, 1 hit SSF63380, SSF63380, 1 hit |
PROSITEi | View protein in PROSITE PS51384, FAD_FR, 1 hit PS50902, FLAVODOXIN_LIKE, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | NCPR2_ARATH | |
Accessioni | Q9SUM3Primary (citable) accession number: Q9SUM3 Secondary accession number(s): F4JPK2, Q39036 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | April 18, 2012 |
Last sequence update: | May 1, 2000 | |
Last modified: | April 7, 2021 | |
This is version 141 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Plant Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
3D-structure, Reference proteomeDocuments
- Arabidopsis thaliana
Arabidopsis thaliana: entries and gene names - PDB cross-references
Index of Protein Data Bank (PDB) cross-references - SIMILARITY comments
Index of protein domains and families