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UniProtKB - Q9SRE7 (CML39_ARATH)
Protein
Calcium-binding protein CML39
Gene
CML39
Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Functioni
Potential calcium sensor that binds calcium in vitro.
1 PublicationCaution
Although assigned as a calmodulin family member by Ref. 3, it only contains EF-hand domains.Curated
Sites
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Metal bindingi | 31 | Calcium 1PROSITE-ProRule annotation | 1 | |
Metal bindingi | 33 | Calcium 1PROSITE-ProRule annotation | 1 | |
Metal bindingi | 35 | Calcium 1PROSITE-ProRule annotation | 1 | |
Metal bindingi | 37 | Calcium 1PROSITE-ProRule annotation | 1 | |
Metal bindingi | 42 | Calcium 1PROSITE-ProRule annotation | 1 | |
Metal bindingi | 67 | Calcium 2PROSITE-ProRule annotation | 1 | |
Metal bindingi | 69 | Calcium 2PROSITE-ProRule annotation | 1 | |
Metal bindingi | 71 | Calcium 2PROSITE-ProRule annotation | 1 | |
Metal bindingi | 73 | Calcium 2PROSITE-ProRule annotation | 1 | |
Metal bindingi | 78 | Calcium 2PROSITE-ProRule annotation | 1 | |
Metal bindingi | 142 | Calcium 3PROSITE-ProRule annotation | 1 | |
Metal bindingi | 144 | Calcium 3PROSITE-ProRule annotation | 1 | |
Metal bindingi | 146 | Calcium 3PROSITE-ProRule annotation | 1 | |
Metal bindingi | 153 | Calcium 3PROSITE-ProRule annotation | 1 |
GO - Molecular functioni
- calcium ion binding Source: TAIR
GO - Biological processi
- cellular response to hypoxia Source: TAIR
Keywordsi
Ligand | Calcium, Metal-binding |
Names & Taxonomyi
Protein namesi | Recommended name: Calcium-binding protein CML39Alternative name(s): Calmodulin-like protein 39 |
Gene namesi | Name:CML39 Ordered Locus Names:At1g76640 ORF Names:F28O16.1 |
Organismi | Arabidopsis thaliana (Mouse-ear cress) |
Taxonomic identifieri | 3702 [NCBI] |
Taxonomic lineagei | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliopsida › eudicotyledons › Gunneridae › Pentapetalae › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis |
Proteomesi |
|
Organism-specific databases
Araporti | AT1G76640 |
TAIRi | locus:2030106, AT1G76640 |
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000342963 | 1 – 159 | Calcium-binding protein CML39Add BLAST | 159 |
Proteomic databases
PaxDbi | Q9SRE7 |
Expressioni
Tissue specificityi
Expressed in the zones of elongation and differentiation in seedling roots and at the root-hypocotyl junction. Expressed from stage 12 of flower development in anthers, specifically in pollen.1 Publication
Inductioni
By salt and methyl jasmonate treatments, drought stress and infection by the bacterial pathogen P.syringae.1 Publication
Gene expression databases
ExpressionAtlasi | Q9SRE7, baseline and differential |
Genevisiblei | Q9SRE7, AT |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 18 – 53 | EF-hand 1PROSITE-ProRule annotationAdd BLAST | 36 | |
Domaini | 54 – 89 | EF-hand 2PROSITE-ProRule annotationAdd BLAST | 36 | |
Domaini | 93 – 128 | EF-hand 3PROSITE-ProRule annotationAdd BLAST | 36 | |
Domaini | 129 – 159 | EF-hand 4PROSITE-ProRule annotationAdd BLAST | 31 |
Keywords - Domaini
RepeatPhylogenomic databases
eggNOGi | KOG0027, Eukaryota |
HOGENOMi | CLU_061288_20_6_1 |
InParanoidi | Q9SRE7 |
OMAi | DEFETMM |
OrthoDBi | 1340191at2759 |
PhylomeDBi | Q9SRE7 |
Family and domain databases
CDDi | cd00051, EFh, 1 hit |
InterProi | View protein in InterPro IPR011992, EF-hand-dom_pair IPR018247, EF_Hand_1_Ca_BS IPR002048, EF_hand_dom |
Pfami | View protein in Pfam PF13499, EF-hand_7, 2 hits |
SMARTi | View protein in SMART SM00054, EFh, 4 hits |
SUPFAMi | SSF47473, SSF47473, 1 hit |
PROSITEi | View protein in PROSITE PS00018, EF_HAND_1, 3 hits PS50222, EF_HAND_2, 4 hits |
i Sequence
Sequence statusi: Complete.
Q9SRE7-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MKNTQRQLSS SFMKFLEEKN RDLEAVFAYM DANRDGRISA EELKKSFKTL
60 70 80 90 100
GEQMSDEEAE AAVKLSDIDG DGMLDINEFA LLIKGNDEFT EEEKKRKIME
110 120 130 140 150
AFRMYIADGE DCITPGSLKM MLMKLGESRT TDDCKVMIQA FDLNADGVLS
FDEFALMMR
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AC010718 Genomic DNA Translation: AAF04446.1 CP002684 Genomic DNA Translation: AEE35868.1 |
PIRi | F96794 |
RefSeqi | NP_177790.1, NM_106314.2 |
Genome annotation databases
EnsemblPlantsi | AT1G76640.1; AT1G76640.1; AT1G76640 |
GeneIDi | 843997 |
Gramenei | AT1G76640.1; AT1G76640.1; AT1G76640 |
KEGGi | ath:AT1G76640 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AC010718 Genomic DNA Translation: AAF04446.1 CP002684 Genomic DNA Translation: AEE35868.1 |
PIRi | F96794 |
RefSeqi | NP_177790.1, NM_106314.2 |
3D structure databases
AlphaFoldDBi | Q9SRE7 |
SMRi | Q9SRE7 |
ModBasei | Search... |
Protein-protein interaction databases
STRINGi | 3702.AT1G76640.1 |
Proteomic databases
PaxDbi | Q9SRE7 |
Genome annotation databases
EnsemblPlantsi | AT1G76640.1; AT1G76640.1; AT1G76640 |
GeneIDi | 843997 |
Gramenei | AT1G76640.1; AT1G76640.1; AT1G76640 |
KEGGi | ath:AT1G76640 |
Organism-specific databases
Araporti | AT1G76640 |
TAIRi | locus:2030106, AT1G76640 |
Phylogenomic databases
eggNOGi | KOG0027, Eukaryota |
HOGENOMi | CLU_061288_20_6_1 |
InParanoidi | Q9SRE7 |
OMAi | DEFETMM |
OrthoDBi | 1340191at2759 |
PhylomeDBi | Q9SRE7 |
Miscellaneous databases
PROi | PR:Q9SRE7 |
Gene expression databases
ExpressionAtlasi | Q9SRE7, baseline and differential |
Genevisiblei | Q9SRE7, AT |
Family and domain databases
CDDi | cd00051, EFh, 1 hit |
InterProi | View protein in InterPro IPR011992, EF-hand-dom_pair IPR018247, EF_Hand_1_Ca_BS IPR002048, EF_hand_dom |
Pfami | View protein in Pfam PF13499, EF-hand_7, 2 hits |
SMARTi | View protein in SMART SM00054, EFh, 4 hits |
SUPFAMi | SSF47473, SSF47473, 1 hit |
PROSITEi | View protein in PROSITE PS00018, EF_HAND_1, 3 hits PS50222, EF_HAND_2, 4 hits |
MobiDBi | Search... |
Entry informationi
Entry namei | CML39_ARATH | |
Accessioni | Q9SRE7Primary (citable) accession number: Q9SRE7 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | July 1, 2008 |
Last sequence update: | May 1, 2000 | |
Last modified: | May 25, 2022 | |
This is version 124 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Plant Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- Arabidopsis thaliana
Arabidopsis thaliana: entries and gene names