Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

60S acidic ribosomal protein P2-2

Gene

RPP2B

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Plays an important role in the elongation step of protein synthesis.

GO - Molecular functioni

  • structural constituent of ribosome Source: CAFA

GO - Biological processi

  • response to cold Source: TAIR
  • translational elongation Source: InterPro

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-ATH-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-ATH-1799339 SRP-dependent cotranslational protein targeting to membrane
R-ATH-72689 Formation of a pool of free 40S subunits
R-ATH-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-ATH-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-ATH-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
60S acidic ribosomal protein P2-2
Gene namesi
Name:RPP2B
Ordered Locus Names:At2g27710
ORF Names:F15K20.19
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 2

Organism-specific databases

AraportiAT2G27710
TAIRilocus:2042062 AT2G27710

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001576591 – 11560S acidic ribosomal protein P2-2Add BLAST115

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei105PhosphoserineBy similarity1

Post-translational modificationi

Phosphorylated.By similarity

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDbiQ9SLF7
PRIDEiQ9SLF7

PTM databases

iPTMnetiQ9SLF7

Expressioni

Gene expression databases

ExpressionAtlasiQ9SLF7 baseline and differential
GenevisibleiQ9SLF7 AT

Interactioni

Subunit structurei

P1 and P2 exist as dimers at the large ribosomal subunit.

Protein-protein interaction databases

BioGridi2667, 1 interactor
STRINGi3702.AT2G27710.1

Structurei

3D structure databases

ProteinModelPortaliQ9SLF7
SMRiQ9SLF7
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG3449 Eukaryota
COG2058 LUCA
HOGENOMiHOG000229897
InParanoidiQ9SLF7
KOiK02943
OMAiHHVTAND
OrthoDBiEOG09361069
PhylomeDBiQ9SLF7

Family and domain databases

Gene3Di1.10.10.1410, 1 hit
HAMAPiMF_01478 Ribosomal_L12_arch, 1 hit
InterProiView protein in InterPro
IPR038716 P1/P2_N_sf
IPR027534 Ribosomal_L12

Sequencei

Sequence statusi: Complete.

This entry describes 1 isoform i produced by alternative splicing. AlignAdd to basket
Note: A number of isoforms are produced. According to EST sequences.
Isoform 1 (identifier: Q9SLF7-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MKVVAAYLLA VLSGKASPTS ADIKTILGSV GAETEDSQIE LLLKEVKGKD
60 70 80 90 100
LAELIAAGRE KLASVPSGGG GGVAVASATS GGGGGGGASA AESKKEEKKE
110
EKEESDDDMG FSLFE
Length:115
Mass (Da):11,444
Last modified:May 1, 2000 - v1
Checksum:i66DF1FA9E0AEE2AE
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti61K → N in AAM65044 (Ref. 4) Curated1
Sequence conflicti89S → P in AAM65044 (Ref. 4) Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC005824 Genomic DNA Translation: AAC73029.1
CP002685 Genomic DNA Translation: AEC08029.1
CP002685 Genomic DNA Translation: AEC08030.1
CP002685 Genomic DNA Translation: AEC08031.1
AF428429 mRNA Translation: AAL16198.1
AY062854 mRNA Translation: AAL32932.1
BT006518 mRNA Translation: AAP21326.1
AY087501 mRNA Translation: AAM65044.1
PIRiA84676
RefSeqiNP_180339.1, NM_128330.4 [Q9SLF7-1]
NP_850106.1, NM_179775.2 [Q9SLF7-1]
NP_973549.1, NM_201820.1 [Q9SLF7-1]
UniGeneiAt.11572
At.1345
At.24020

Genome annotation databases

EnsemblPlantsiAT2G27710.1; AT2G27710.1; AT2G27710 [Q9SLF7-1]
AT2G27710.2; AT2G27710.2; AT2G27710 [Q9SLF7-1]
AT2G27710.3; AT2G27710.3; AT2G27710 [Q9SLF7-1]
GeneIDi817317
GrameneiAT2G27710.1; AT2G27710.1; AT2G27710 [Q9SLF7-1]
AT2G27710.2; AT2G27710.2; AT2G27710 [Q9SLF7-1]
AT2G27710.3; AT2G27710.3; AT2G27710 [Q9SLF7-1]
KEGGiath:AT2G27710

Keywords - Coding sequence diversityi

Alternative splicing

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC005824 Genomic DNA Translation: AAC73029.1
CP002685 Genomic DNA Translation: AEC08029.1
CP002685 Genomic DNA Translation: AEC08030.1
CP002685 Genomic DNA Translation: AEC08031.1
AF428429 mRNA Translation: AAL16198.1
AY062854 mRNA Translation: AAL32932.1
BT006518 mRNA Translation: AAP21326.1
AY087501 mRNA Translation: AAM65044.1
PIRiA84676
RefSeqiNP_180339.1, NM_128330.4 [Q9SLF7-1]
NP_850106.1, NM_179775.2 [Q9SLF7-1]
NP_973549.1, NM_201820.1 [Q9SLF7-1]
UniGeneiAt.11572
At.1345
At.24020

3D structure databases

ProteinModelPortaliQ9SLF7
SMRiQ9SLF7
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi2667, 1 interactor
STRINGi3702.AT2G27710.1

PTM databases

iPTMnetiQ9SLF7

Proteomic databases

PaxDbiQ9SLF7
PRIDEiQ9SLF7

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT2G27710.1; AT2G27710.1; AT2G27710 [Q9SLF7-1]
AT2G27710.2; AT2G27710.2; AT2G27710 [Q9SLF7-1]
AT2G27710.3; AT2G27710.3; AT2G27710 [Q9SLF7-1]
GeneIDi817317
GrameneiAT2G27710.1; AT2G27710.1; AT2G27710 [Q9SLF7-1]
AT2G27710.2; AT2G27710.2; AT2G27710 [Q9SLF7-1]
AT2G27710.3; AT2G27710.3; AT2G27710 [Q9SLF7-1]
KEGGiath:AT2G27710

Organism-specific databases

AraportiAT2G27710
TAIRilocus:2042062 AT2G27710

Phylogenomic databases

eggNOGiKOG3449 Eukaryota
COG2058 LUCA
HOGENOMiHOG000229897
InParanoidiQ9SLF7
KOiK02943
OMAiHHVTAND
OrthoDBiEOG09361069
PhylomeDBiQ9SLF7

Enzyme and pathway databases

ReactomeiR-ATH-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-ATH-1799339 SRP-dependent cotranslational protein targeting to membrane
R-ATH-72689 Formation of a pool of free 40S subunits
R-ATH-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-ATH-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-ATH-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Miscellaneous databases

PROiPR:Q9SLF7

Gene expression databases

ExpressionAtlasiQ9SLF7 baseline and differential
GenevisibleiQ9SLF7 AT

Family and domain databases

Gene3Di1.10.10.1410, 1 hit
HAMAPiMF_01478 Ribosomal_L12_arch, 1 hit
InterProiView protein in InterPro
IPR038716 P1/P2_N_sf
IPR027534 Ribosomal_L12
ProtoNetiSearch...

Entry informationi

Entry nameiRLA22_ARATH
AccessioniPrimary (citable) accession number: Q9SLF7
Secondary accession number(s): Q8LB03
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 8, 2000
Last sequence update: May 1, 2000
Last modified: November 7, 2018
This is version 130 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again