UniProtKB - Q9SJ36 (RS172_ARATH)
Protein
40S ribosomal protein S17-2
Gene
RPS17B
Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Functioni
GO - Molecular functioni
- mRNA binding Source: TAIR
- structural constituent of ribosome Source: CAFA
GO - Biological processi
- translation Source: InterPro
Keywordsi
Molecular function | Ribonucleoprotein, Ribosomal protein |
Names & Taxonomyi
Protein namesi | Recommended name: 40S ribosomal protein S17-2 |
Gene namesi | Name:RPS17B Ordered Locus Names:At2g05220 ORF Names:F5G3.12 |
Organismi | Arabidopsis thaliana (Mouse-ear cress) |
Taxonomic identifieri | 3702 [NCBI] |
Taxonomic lineagei | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliopsida › eudicotyledons › Gunneridae › Pentapetalae › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis |
Proteomesi |
|
Organism-specific databases
Araporti | AT2G05220 |
TAIRi | locus:2051229, AT2G05220 |
Subcellular locationi
Cytosol
- cytosolic small ribosomal subunit Source: TAIR
Mitochondrion
- mitochondrion Source: TAIR
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000141539 | 1 – 140 | 40S ribosomal protein S17-2Add BLAST | 140 |
Proteomic databases
PaxDbi | Q9SJ36 |
PRIDEi | Q9SJ36 |
ProteomicsDBi | 226864 |
Expressioni
Gene expression databases
ExpressionAtlasi | Q9SJ36, baseline and differential |
Genevisiblei | Q9SJ36, AT |
Interactioni
Protein-protein interaction databases
BioGRIDi | 470, 1 interactor |
STRINGi | 3702.AT2G05220.2 |
Family & Domainsi
Sequence similaritiesi
Belongs to the eukaryotic ribosomal protein eS17 family.Curated
Phylogenomic databases
eggNOGi | KOG0187, Eukaryota |
HOGENOMi | CLU_112958_2_0_1 |
InParanoidi | Q9SJ36 |
OMAi | KHVCEEM |
OrthoDBi | 1459807at2759 |
PhylomeDBi | Q9SJ36 |
Family and domain databases
Gene3Di | 1.10.60.20, 1 hit |
HAMAPi | MF_00511, Ribosomal_S17e, 1 hit |
InterProi | View protein in InterPro IPR001210, Ribosomal_S17e IPR018273, Ribosomal_S17e_CS IPR036401, RPS17e-like_sf |
PANTHERi | PTHR10732, PTHR10732, 1 hit |
Pfami | View protein in Pfam PF00833, Ribosomal_S17e, 1 hit |
SUPFAMi | SSF116820, SSF116820, 1 hit |
PROSITEi | View protein in PROSITE PS00712, RIBOSOMAL_S17E, 1 hit |
i Sequence
Sequence statusi: Complete.
Q9SJ36-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MGRVRTKTVK KSSRQVIEKY YSRMTLDFHT NKKILEEVAI IPSKRLRNKI
60 70 80 90 100
AGFSTHLMKR IQKGPVRGIS LKLQEEERER RMDFVPDESA IKTDEIKVDK
110 120 130 140
ETLEMLASLG MSDTSGISAV EPQQAMAPIA AFGGRAPRRY
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AC007018 Genomic DNA Translation: AAD29060.2 CP002685 Genomic DNA Translation: AEC05907.1 CP002685 Genomic DNA Translation: AEC05908.1 AF370312 mRNA Translation: AAK44127.1 AY063098 mRNA Translation: AAL34272.1 BT002068 mRNA Translation: AAN72079.1 BT006533 mRNA Translation: AAP21341.1 |
PIRi | B84466 |
RefSeqi | NP_001031325.1, NM_001036248.1 NP_565320.1, NM_126548.5 |
Genome annotation databases
EnsemblPlantsi | AT2G05220.1; AT2G05220.1; AT2G05220 AT2G05220.2; AT2G05220.2; AT2G05220 |
GeneIDi | 815070 |
Gramenei | AT2G05220.1; AT2G05220.1; AT2G05220 AT2G05220.2; AT2G05220.2; AT2G05220 |
KEGGi | ath:AT2G05220 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AC007018 Genomic DNA Translation: AAD29060.2 CP002685 Genomic DNA Translation: AEC05907.1 CP002685 Genomic DNA Translation: AEC05908.1 AF370312 mRNA Translation: AAK44127.1 AY063098 mRNA Translation: AAL34272.1 BT002068 mRNA Translation: AAN72079.1 BT006533 mRNA Translation: AAP21341.1 |
PIRi | B84466 |
RefSeqi | NP_001031325.1, NM_001036248.1 NP_565320.1, NM_126548.5 |
3D structure databases
SMRi | Q9SJ36 |
ModBasei | Search... |
Protein-protein interaction databases
BioGRIDi | 470, 1 interactor |
STRINGi | 3702.AT2G05220.2 |
Proteomic databases
PaxDbi | Q9SJ36 |
PRIDEi | Q9SJ36 |
ProteomicsDBi | 226864 |
Genome annotation databases
EnsemblPlantsi | AT2G05220.1; AT2G05220.1; AT2G05220 AT2G05220.2; AT2G05220.2; AT2G05220 |
GeneIDi | 815070 |
Gramenei | AT2G05220.1; AT2G05220.1; AT2G05220 AT2G05220.2; AT2G05220.2; AT2G05220 |
KEGGi | ath:AT2G05220 |
Organism-specific databases
Araporti | AT2G05220 |
TAIRi | locus:2051229, AT2G05220 |
Phylogenomic databases
eggNOGi | KOG0187, Eukaryota |
HOGENOMi | CLU_112958_2_0_1 |
InParanoidi | Q9SJ36 |
OMAi | KHVCEEM |
OrthoDBi | 1459807at2759 |
PhylomeDBi | Q9SJ36 |
Miscellaneous databases
PROi | PR:Q9SJ36 |
Gene expression databases
ExpressionAtlasi | Q9SJ36, baseline and differential |
Genevisiblei | Q9SJ36, AT |
Family and domain databases
Gene3Di | 1.10.60.20, 1 hit |
HAMAPi | MF_00511, Ribosomal_S17e, 1 hit |
InterProi | View protein in InterPro IPR001210, Ribosomal_S17e IPR018273, Ribosomal_S17e_CS IPR036401, RPS17e-like_sf |
PANTHERi | PTHR10732, PTHR10732, 1 hit |
Pfami | View protein in Pfam PF00833, Ribosomal_S17e, 1 hit |
SUPFAMi | SSF116820, SSF116820, 1 hit |
PROSITEi | View protein in PROSITE PS00712, RIBOSOMAL_S17E, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | RS172_ARATH | |
Accessioni | Q9SJ36Primary (citable) accession number: Q9SJ36 Secondary accession number(s): Q94K44 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | December 19, 2001 |
Last sequence update: | January 23, 2007 | |
Last modified: | December 2, 2020 | |
This is version 142 of the entry and version 3 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Plant Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- Arabidopsis thaliana
Arabidopsis thaliana: entries and gene names - SIMILARITY comments
Index of protein domains and families - Ribosomal proteins
Ribosomal proteins families and list of entries