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Protein

60S ribosomal protein L35-1

Gene

RPL35A

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  • mRNA binding Source: TAIR
  • structural constituent of ribosome Source: CAFA

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-ATH-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-ATH-1799339 SRP-dependent cotranslational protein targeting to membrane
R-ATH-72689 Formation of a pool of free 40S subunits
R-ATH-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-ATH-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-ATH-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L35-1
Gene namesi
Name:RPL35A
Ordered Locus Names:At3g09500
ORF Names:F11F8_7
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 3

Organism-specific databases

AraportiAT3G09500
TAIRilocus:2074974 AT3G09500

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001305451 – 12360S ribosomal protein L35-1Add BLAST123

Proteomic databases

PaxDbiQ9SF53
PRIDEiQ9SF53

PTM databases

iPTMnetiQ9SF53

Expressioni

Gene expression databases

ExpressionAtlasiQ9SF53 baseline and differential
GenevisibleiQ9SF53 AT

Interactioni

Protein-protein interaction databases

BioGridi5441, 8 interactors
IntActiQ9SF53, 3 interactors
STRINGi3702.AT3G09500.1

Structurei

3D structure databases

ProteinModelPortaliQ9SF53
SMRiQ9SF53
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG3436 Eukaryota
COG0255 LUCA
HOGENOMiHOG000207749
InParanoidiQ9SF53
KOiK02918
OMAiTVINAKQ
OrthoDBiEOG09360TQT
PhylomeDBiQ9SF53

Family and domain databases

HAMAPiMF_00374 Ribosomal_L29, 1 hit
InterProiView protein in InterPro
IPR001854 Ribosomal_L29/L35
IPR036049 Ribosomal_L29/L35_sf
IPR018254 Ribosomal_L29_CS
PfamiView protein in Pfam
PF00831 Ribosomal_L29, 1 hit
SUPFAMiSSF46561 SSF46561, 1 hit
TIGRFAMsiTIGR00012 L29, 1 hit
PROSITEiView protein in PROSITE
PS00579 RIBOSOMAL_L29, 1 hit

Sequencei

Sequence statusi: Complete.

Q9SF53-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MARIKVHELR EKSKSDLQNQ LKELKAELAL LRVAKVTGGA PNKLSKIKVV
60 70 80 90 100
RKSIAQVLTV SSQKQKSALR EAYKNKKLLP LDLRPKKTRA IRRRLTKHQA
110 120
SLKTEREKKK EMYFPIRKYA IKV
Length:123
Mass (Da):14,285
Last modified:May 1, 2000 - v1
Checksum:i09B713AA7FC0F09E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC016661 Genomic DNA Translation: AAF23282.1
CP002686 Genomic DNA Translation: AEE74774.1
BT004175 mRNA Translation: AAO42195.1
BT004938 mRNA Translation: AAO50471.1
AY086291 mRNA Translation: AAM64363.1
RefSeqiNP_187561.1, NM_111784.3
UniGeneiAt.40096

Genome annotation databases

EnsemblPlantsiAT3G09500.1; AT3G09500.1; AT3G09500
GeneIDi820107
GrameneiAT3G09500.1; AT3G09500.1; AT3G09500
KEGGiath:AT3G09500

Similar proteinsi

Entry informationi

Entry nameiRL351_ARATH
AccessioniPrimary (citable) accession number: Q9SF53
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 13, 2004
Last sequence update: May 1, 2000
Last modified: April 25, 2018
This is version 113 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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