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UniProtKB - Q9SAH7 (WRK40_ARATH)
Protein
Probable WRKY transcription factor 40
Gene
WRKY40
Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Functioni
Transcription factor (By similarity).
Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity).
By similarityRegions
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
DNA bindingi | 140 – 206 | WRKYPROSITE-ProRule annotationAdd BLAST | 67 |
GO - Molecular functioni
- DNA-binding transcription factor activity Source: TAIR
- transcription cis-regulatory region binding Source: TAIR
GO - Biological processi
- defense response to bacterium Source: TAIR
- defense response to fungus Source: TAIR
- negative regulation of transcription, DNA-templated Source: CACAO
- regulation of defense response Source: TAIR
- response to molecule of bacterial origin Source: TAIR
- response to salicylic acid Source: TAIR
- response to wounding Source: TAIR
Keywordsi
Molecular function | DNA-binding |
Biological process | Transcription, Transcription regulation |
Names & Taxonomyi
Protein namesi | Recommended name: Probable WRKY transcription factor 401 PublicationAlternative name(s): WRKY DNA-binding protein 401 Publication |
Gene namesi | Name:WRKY401 Publication Ordered Locus Names:At1g80840Imported ORF Names:F23A5.19Imported |
Organismi | Arabidopsis thaliana (Mouse-ear cress) |
Taxonomic identifieri | 3702 [NCBI] |
Taxonomic lineagei | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliopsida › eudicotyledons › Gunneridae › Pentapetalae › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis |
Proteomesi |
|
Organism-specific databases
Araporti | AT1G80840 |
TAIRi | locus:2025687, AT1G80840 |
Subcellular locationi
Nucleus
- Nucleus PROSITE-ProRule annotation
Nucleus
- nucleus Source: TAIR
Keywords - Cellular componenti
NucleusPTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000133681 | 1 – 302 | Probable WRKY transcription factor 40Add BLAST | 302 |
Proteomic databases
PaxDbi | Q9SAH7 |
ProteomicsDBi | 246416 |
PTM databases
iPTMneti | Q9SAH7 |
Expressioni
Gene expression databases
ExpressionAtlasi | Q9SAH7, baseline and differential |
Genevisiblei | Q9SAH7, AT |
Interactioni
Binary interactionsi
Q9SAH7
With | #Exp. | IntAct |
---|---|---|
WRKY18 [Q9C5T4] | 7 | EBI-1993363,EBI-1993349 |
WRKY38 [Q8GWF1] | 6 | EBI-1993363,EBI-1993263 |
WRKY60 [Q9SK33] | 5 | EBI-1993363,EBI-2112777 |
Protein-protein interaction databases
BioGRIDi | 29641, 17 interactors |
IntActi | Q9SAH7, 8 interactors |
STRINGi | 3702.AT1G80840.1 |
Family & Domainsi
Sequence similaritiesi
Belongs to the WRKY group III family.Curated
Phylogenomic databases
eggNOGi | ENOG502QR7M, Eukaryota |
HOGENOMi | CLU_047067_0_0_1 |
InParanoidi | Q9SAH7 |
OMAi | SPDQMEC |
OrthoDBi | 1185192at2759 |
PhylomeDBi | Q9SAH7 |
Family and domain databases
Gene3Di | 2.20.25.80, 1 hit |
InterProi | View protein in InterPro IPR003657, WRKY_dom IPR036576, WRKY_dom_sf IPR044810, WRKY_plant |
PANTHERi | PTHR31429, PTHR31429, 1 hit |
Pfami | View protein in Pfam PF03106, WRKY, 1 hit |
SMARTi | View protein in SMART SM00774, WRKY, 1 hit |
SUPFAMi | SSF118290, SSF118290, 1 hit |
PROSITEi | View protein in PROSITE PS50811, WRKY, 1 hit |
i Sequence
Sequence statusi: Complete.
Q9SAH7-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MDQYSSSLVD TSLDLTIGVT RMRVEEDPPT SALVEELNRV SAENKKLSEM
60 70 80 90 100
LTLMCDNYNV LRKQLMEYVN KSNITERDQI SPPKKRKSPA REDAFSCAVI
110 120 130 140 150
GGVSESSSTD QDEYLCKKQR EETVVKEKVS RVYYKTEASD TTLVVKDGYQ
160 170 180 190 200
WRKYGQKVTR DNPSPRAYFK CACAPSCSVK KKVQRSVEDQ SVLVATYEGE
210 220 230 240 250
HNHPMPSQID SNNGLNRHIS HGGSASTPVA ANRRSSLTVP VTTVDMIESK
260 270 280 290 300
KVTSPTSRID FPQVQKLLVE QMASSLTKDP NFTAALAAAV TGKLYQQNHT
EK
Experimental Info
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Sequence conflicti | 4 | Y → H in BAH19836 (PubMed:19423640).Curated | 1 | |
Sequence conflicti | 137 | E → V in BAH19738 (PubMed:19423640).Curated | 1 | |
Sequence conflicti | 223 | G → S in AAM65933 (Ref. 7) Curated | 1 |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AF480149 mRNA Translation: AAL85879.1 AC011713 Genomic DNA Translation: AAF14671.1 CP002684 Genomic DNA Translation: AEE36457.1 BT001914 mRNA Translation: AAN71913.1 AK317045 mRNA Translation: BAH19738.1 AK317150 mRNA Translation: BAH19836.1 AB493542 mRNA Translation: BAH30380.1 AY088395 mRNA Translation: AAM65933.1 |
PIRi | A96841 |
RefSeqi | NP_178199.1, NM_106732.4 |
Genome annotation databases
EnsemblPlantsi | AT1G80840.1; AT1G80840.1; AT1G80840 |
GeneIDi | 844423 |
Gramenei | AT1G80840.1; AT1G80840.1; AT1G80840 |
KEGGi | ath:AT1G80840 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AF480149 mRNA Translation: AAL85879.1 AC011713 Genomic DNA Translation: AAF14671.1 CP002684 Genomic DNA Translation: AEE36457.1 BT001914 mRNA Translation: AAN71913.1 AK317045 mRNA Translation: BAH19738.1 AK317150 mRNA Translation: BAH19836.1 AB493542 mRNA Translation: BAH30380.1 AY088395 mRNA Translation: AAM65933.1 |
PIRi | A96841 |
RefSeqi | NP_178199.1, NM_106732.4 |
3D structure databases
AlphaFoldDBi | Q9SAH7 |
SMRi | Q9SAH7 |
ModBasei | Search... |
Protein-protein interaction databases
BioGRIDi | 29641, 17 interactors |
IntActi | Q9SAH7, 8 interactors |
STRINGi | 3702.AT1G80840.1 |
PTM databases
iPTMneti | Q9SAH7 |
Proteomic databases
PaxDbi | Q9SAH7 |
ProteomicsDBi | 246416 |
Genome annotation databases
EnsemblPlantsi | AT1G80840.1; AT1G80840.1; AT1G80840 |
GeneIDi | 844423 |
Gramenei | AT1G80840.1; AT1G80840.1; AT1G80840 |
KEGGi | ath:AT1G80840 |
Organism-specific databases
Araporti | AT1G80840 |
TAIRi | locus:2025687, AT1G80840 |
Phylogenomic databases
eggNOGi | ENOG502QR7M, Eukaryota |
HOGENOMi | CLU_047067_0_0_1 |
InParanoidi | Q9SAH7 |
OMAi | SPDQMEC |
OrthoDBi | 1185192at2759 |
PhylomeDBi | Q9SAH7 |
Miscellaneous databases
PROi | PR:Q9SAH7 |
Gene expression databases
ExpressionAtlasi | Q9SAH7, baseline and differential |
Genevisiblei | Q9SAH7, AT |
Family and domain databases
Gene3Di | 2.20.25.80, 1 hit |
InterProi | View protein in InterPro IPR003657, WRKY_dom IPR036576, WRKY_dom_sf IPR044810, WRKY_plant |
PANTHERi | PTHR31429, PTHR31429, 1 hit |
Pfami | View protein in Pfam PF03106, WRKY, 1 hit |
SMARTi | View protein in SMART SM00774, WRKY, 1 hit |
SUPFAMi | SSF118290, SSF118290, 1 hit |
PROSITEi | View protein in PROSITE PS50811, WRKY, 1 hit |
MobiDBi | Search... |
Entry informationi
Entry namei | WRK40_ARATH | |
Accessioni | Q9SAH7Primary (citable) accession number: Q9SAH7 Secondary accession number(s): B9DG71 Q8L9J5 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | May 15, 2002 |
Last sequence update: | May 1, 2000 | |
Last modified: | May 25, 2022 | |
This is version 135 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Plant Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- Arabidopsis thaliana
Arabidopsis thaliana: entries and gene names - SIMILARITY comments
Index of protein domains and families