UniProtKB - Q9RY49 (RL9_DEIRA)
Protein
50S ribosomal protein L9
Gene
rplI
Organism
Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
Status
Functioni
Binds to the 23S rRNA and protein L31.
GO - Molecular functioni
- rRNA binding Source: UniProtKB-UniRule
- structural constituent of ribosome Source: InterPro
GO - Biological processi
- translation Source: UniProtKB-UniRule
Keywordsi
Molecular function | Ribonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding |
Names & Taxonomyi
Protein namesi | Recommended name: 50S ribosomal protein L9 |
Gene namesi | Name:rplI Ordered Locus Names:DR_0102 |
Organismi | Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) |
Taxonomic identifieri | 243230 [NCBI] |
Taxonomic lineagei | Bacteria › Deinococcus-Thermus › Deinococci › Deinococcales › Deinococcaceae › Deinococcus › |
Proteomesi |
|
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000176635 | 1 – 146 | 50S ribosomal protein L9Add BLAST | 146 |
Interactioni
Subunit structurei
Part of the 50S ribosomal subunit. Contacts protein L31.
6 PublicationsProtein-protein interaction databases
STRINGi | 243230.DR_0102 |
Structurei
3D structure databases
SMRi | Q9RY49 |
ModBasei | Search... |
PDBe-KBi | Search... |
Miscellaneous databases
EvolutionaryTracei | Q9RY49 |
Family & Domainsi
Sequence similaritiesi
Belongs to the bacterial ribosomal protein bL9 family.Curated
Phylogenomic databases
eggNOGi | COG0359, Bacteria |
HOGENOMi | CLU_078938_4_1_0 |
InParanoidi | Q9RY49 |
OMAi | AIRWTKG |
OrthoDBi | 1959318at2 |
Family and domain databases
Gene3Di | 3.10.430.100, 1 hit 3.40.5.10, 1 hit |
HAMAPi | MF_00503, Ribosomal_L9, 1 hit |
InterProi | View protein in InterPro IPR000244, Ribosomal_L9 IPR009027, Ribosomal_L9/RNase_H1_N IPR020594, Ribosomal_L9_bac/chp IPR020069, Ribosomal_L9_C IPR036791, Ribosomal_L9_C_sf IPR020070, Ribosomal_L9_N IPR036935, Ribosomal_L9_N_sf |
PANTHERi | PTHR21368, PTHR21368, 1 hit |
Pfami | View protein in Pfam PF03948, Ribosomal_L9_C, 1 hit PF01281, Ribosomal_L9_N, 1 hit |
SUPFAMi | SSF55653, SSF55653, 1 hit SSF55658, SSF55658, 1 hit |
TIGRFAMsi | TIGR00158, L9, 1 hit |
PROSITEi | View protein in PROSITE PS00651, RIBOSOMAL_L9, 1 hit |
i Sequence
Sequence statusi: Complete.
Q9RY49-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MQVILLEPSR LGKTGEVVSV KDGYARNWLI PQGLAVSATR TNMKTLEAQL
60 70 80 90 100
RSIEKRQAQE KAVAEDLASR LNGVAVELSV RAGEGKIYGA VTHQDVANSL
110 120 130 140
DQLGFDVDRR KIDMPKTVKE VGEYDIAYRA HPEVTIPMKL VVHAAK
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AE000513 Genomic DNA Translation: AAF09694.1 |
PIRi | C75559 |
RefSeqi | NP_293828.1, NC_001263.1 WP_010886750.1, NZ_CP015081.1 |
Genome annotation databases
EnsemblBacteriai | AAF09694; AAF09694; DR_0102 |
KEGGi | dra:DR_0102 |
PATRICi | fig|243230.17.peg.267 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AE000513 Genomic DNA Translation: AAF09694.1 |
PIRi | C75559 |
RefSeqi | NP_293828.1, NC_001263.1 WP_010886750.1, NZ_CP015081.1 |
3D structure databases
Select the link destinations: PDBei RCSB PDBi PDBji Links Updated | PDB entry | Method | Resolution (Å) | Chain | Positions | PDBsum |
1NKW | X-ray | 3.10 | F | 1-146 | [»] | |
1NWX | X-ray | 3.50 | F | 1-146 | [»] | |
1NWY | X-ray | 3.30 | F | 1-146 | [»] | |
1SM1 | X-ray | 3.42 | F | 1-146 | [»] | |
1XBP | X-ray | 3.50 | F | 1-146 | [»] | |
4V49 | X-ray | 8.70 | F | 1-52 | [»] | |
4V4A | X-ray | 9.50 | F | 1-52 | [»] | |
4V4G | X-ray | 11.50 | I | 1-52 | [»] | |
SMRi | Q9RY49 | |||||
ModBasei | Search... | |||||
PDBe-KBi | Search... |
Protein-protein interaction databases
STRINGi | 243230.DR_0102 |
Genome annotation databases
EnsemblBacteriai | AAF09694; AAF09694; DR_0102 |
KEGGi | dra:DR_0102 |
PATRICi | fig|243230.17.peg.267 |
Phylogenomic databases
eggNOGi | COG0359, Bacteria |
HOGENOMi | CLU_078938_4_1_0 |
InParanoidi | Q9RY49 |
OMAi | AIRWTKG |
OrthoDBi | 1959318at2 |
Miscellaneous databases
EvolutionaryTracei | Q9RY49 |
Family and domain databases
Gene3Di | 3.10.430.100, 1 hit 3.40.5.10, 1 hit |
HAMAPi | MF_00503, Ribosomal_L9, 1 hit |
InterProi | View protein in InterPro IPR000244, Ribosomal_L9 IPR009027, Ribosomal_L9/RNase_H1_N IPR020594, Ribosomal_L9_bac/chp IPR020069, Ribosomal_L9_C IPR036791, Ribosomal_L9_C_sf IPR020070, Ribosomal_L9_N IPR036935, Ribosomal_L9_N_sf |
PANTHERi | PTHR21368, PTHR21368, 1 hit |
Pfami | View protein in Pfam PF03948, Ribosomal_L9_C, 1 hit PF01281, Ribosomal_L9_N, 1 hit |
SUPFAMi | SSF55653, SSF55653, 1 hit SSF55658, SSF55658, 1 hit |
TIGRFAMsi | TIGR00158, L9, 1 hit |
PROSITEi | View protein in PROSITE PS00651, RIBOSOMAL_L9, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | RL9_DEIRA | |
Accessioni | Q9RY49Primary (citable) accession number: Q9RY49 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | December 13, 2001 |
Last sequence update: | May 1, 2000 | |
Last modified: | December 2, 2020 | |
This is version 127 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Prokaryotic Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
3D-structure, Direct protein sequencing, Reference proteomeDocuments
- PDB cross-references
Index of Protein Data Bank (PDB) cross-references - SIMILARITY comments
Index of protein domains and families - Ribosomal proteins
Ribosomal proteins families and list of entries