UniProtKB - Q9RXJ4 (RL29_DEIRA)
Protein
50S ribosomal protein L29
Gene
rpmC
Organism
Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
Status
Functioni
Binds the 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.
GO - Molecular functioni
- rRNA binding Source: UniProtKB-KW
- structural constituent of ribosome Source: InterPro
GO - Biological processi
- translation Source: UniProtKB-UniRule
Keywordsi
Molecular function | Ribonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding |
Names & Taxonomyi
Protein namesi | Recommended name: 50S ribosomal protein L29 |
Gene namesi | Name:rpmC Ordered Locus Names:DR_0319 |
Organismi | Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) |
Taxonomic identifieri | 243230 [NCBI] |
Taxonomic lineagei | Bacteria › Deinococcus-Thermus › Deinococci › Deinococcales › Deinococcaceae › Deinococcus › |
Proteomesi |
|
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000130383 | 1 – 67 | 50S ribosomal protein L29Add BLAST | 67 |
Structurei
Secondary structure
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details3D structure databases
SMRi | Q9RXJ4 |
ModBasei | Search... |
PDBe-KBi | Search... |
Miscellaneous databases
EvolutionaryTracei | Q9RXJ4 |
Family & Domainsi
Sequence similaritiesi
Belongs to the universal ribosomal protein uL29 family.Curated
Phylogenomic databases
eggNOGi | COG0255, Bacteria |
HOGENOMi | CLU_158491_0_2_0 |
InParanoidi | Q9RXJ4 |
OMAi | NLAQPHR |
OrthoDBi | 2063644at2 |
Family and domain databases
Gene3Di | 1.10.287.310, 1 hit |
HAMAPi | MF_00374, Ribosomal_L29, 1 hit |
InterProi | View protein in InterPro IPR001854, Ribosomal_L29/L35 IPR036049, Ribosomal_L29/L35_sf IPR018254, Ribosomal_L29_CS |
Pfami | View protein in Pfam PF00831, Ribosomal_L29, 1 hit |
SUPFAMi | SSF46561, SSF46561, 1 hit |
TIGRFAMsi | TIGR00012, L29, 1 hit |
PROSITEi | View protein in PROSITE PS00579, RIBOSOMAL_L29, 1 hit |
i Sequence
Sequence statusi: Complete.
Q9RXJ4-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MKPSEMRNLQ ATDFAKEIDA RKKELMELRF QAAAGQLAQP HRVRQLRREV
60
AQLNTVKAEL ARKGEQQ
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AE000513 Genomic DNA Translation: AAF09900.1 |
PIRi | G75534 |
RefSeqi | NP_294042.1, NC_001263.1 WP_010886964.1, NZ_CP015081.1 |
Genome annotation databases
EnsemblBacteriai | AAF09900; AAF09900; DR_0319 |
KEGGi | dra:DR_0319 |
PATRICi | fig|243230.17.peg.485 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AE000513 Genomic DNA Translation: AAF09900.1 |
PIRi | G75534 |
RefSeqi | NP_294042.1, NC_001263.1 WP_010886964.1, NZ_CP015081.1 |
3D structure databases
Select the link destinations: PDBei RCSB PDBi PDBji Links Updated | PDB entry | Method | Resolution (Å) | Chain | Positions | PDBsum |
1NKW | X-ray | 3.10 | W | 1-67 | [»] | |
1NWX | X-ray | 3.50 | W | 1-67 | [»] | |
1NWY | X-ray | 3.30 | W | 1-67 | [»] | |
1SM1 | X-ray | 3.42 | W | 1-67 | [»] | |
1XBP | X-ray | 3.50 | W | 1-67 | [»] | |
2AAR | X-ray | 3.50 | W | 1-67 | [»] | |
2D3O | X-ray | 3.35 | W | 1-67 | [»] | |
2ZJP | X-ray | 3.70 | V | 1-67 | [»] | |
2ZJQ | X-ray | 3.30 | V | 1-67 | [»] | |
2ZJR | X-ray | 2.91 | V | 1-67 | [»] | |
3CF5 | X-ray | 3.30 | V | 1-67 | [»] | |
3DLL | X-ray | 3.50 | V | 1-67 | [»] | |
3PIO | X-ray | 3.25 | V | 1-67 | [»] | |
3PIP | X-ray | 3.45 | V | 1-67 | [»] | |
4IO9 | X-ray | 3.20 | V | 1-67 | [»] | |
4IOA | X-ray | 3.20 | V | 1-67 | [»] | |
4IOC | X-ray | 3.60 | V | 1-67 | [»] | |
4U67 | X-ray | 3.65 | V | 1-67 | [»] | |
4V49 | X-ray | 8.70 | W | 2-66 | [»] | |
4V4A | X-ray | 9.50 | W | 2-66 | [»] | |
4V4G | X-ray | 11.50 | Y | 2-66 | [»] | |
4WFN | X-ray | 3.54 | V | 1-67 | [»] | |
5DM6 | X-ray | 2.90 | V | 1-66 | [»] | |
5DM7 | X-ray | 3.00 | V | 1-66 | [»] | |
5JVG | X-ray | 3.43 | V | 1-67 | [»] | |
5JVH | X-ray | 3.58 | V | 1-67 | [»] | |
SMRi | Q9RXJ4 | |||||
ModBasei | Search... | |||||
PDBe-KBi | Search... |
Protein-protein interaction databases
STRINGi | 243230.DR_0319 |
Genome annotation databases
EnsemblBacteriai | AAF09900; AAF09900; DR_0319 |
KEGGi | dra:DR_0319 |
PATRICi | fig|243230.17.peg.485 |
Phylogenomic databases
eggNOGi | COG0255, Bacteria |
HOGENOMi | CLU_158491_0_2_0 |
InParanoidi | Q9RXJ4 |
OMAi | NLAQPHR |
OrthoDBi | 2063644at2 |
Miscellaneous databases
EvolutionaryTracei | Q9RXJ4 |
Family and domain databases
Gene3Di | 1.10.287.310, 1 hit |
HAMAPi | MF_00374, Ribosomal_L29, 1 hit |
InterProi | View protein in InterPro IPR001854, Ribosomal_L29/L35 IPR036049, Ribosomal_L29/L35_sf IPR018254, Ribosomal_L29_CS |
Pfami | View protein in Pfam PF00831, Ribosomal_L29, 1 hit |
SUPFAMi | SSF46561, SSF46561, 1 hit |
TIGRFAMsi | TIGR00012, L29, 1 hit |
PROSITEi | View protein in PROSITE PS00579, RIBOSOMAL_L29, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | RL29_DEIRA | |
Accessioni | Q9RXJ4Primary (citable) accession number: Q9RXJ4 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | June 1, 2001 |
Last sequence update: | May 1, 2000 | |
Last modified: | December 2, 2020 | |
This is version 126 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Prokaryotic Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
3D-structure, Direct protein sequencing, Reference proteomeDocuments
- PDB cross-references
Index of Protein Data Bank (PDB) cross-references - SIMILARITY comments
Index of protein domains and families - Ribosomal proteins
Ribosomal proteins families and list of entries