UniProtKB - Q9RW50 (Q9RW50_DEIRA)
Protein
DNA repair protein RecO
Gene
recO
Organism
Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
Status
Functioni
Involved in DNA repair and RecF pathway recombination.UniRule annotation
Sites
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Metal bindingi | 153 | ZincCombined sources | 1 | |
Metal bindingi | 156 | ZincCombined sources | 1 | |
Metal bindingi | 173 | ZincCombined sources | 1 | |
Metal bindingi | 176 | ZincCombined sources | 1 |
GO - Molecular functioni
- metal ion binding Source: UniProtKB-KW
GO - Biological processi
- DNA recombination Source: UniProtKB-UniRule
- double-strand break repair Source: CACAO
Keywordsi
Biological process | DNA damage, DNA recombinationUniRule annotationARBA annotation, DNA repairUniRule annotationARBA annotation |
Ligand | Metal-bindingCombined sources, ZincCombined sources |
Names & Taxonomyi
Protein namesi | Recommended name: DNA repair protein RecOUniRule annotationARBA annotationAlternative name(s): Recombination protein OUniRule annotationARBA annotation |
Gene namesi | Name:recOUniRule annotation Ordered Locus Names:DR_0819Imported |
Organismi | Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)Imported |
Taxonomic identifieri | 243230 [NCBI] |
Taxonomic lineagei | Bacteria › Deinococcus-Thermus › Deinococci › Deinococcales › Deinococcaceae › Deinococcus › |
Proteomesi |
|
Interactioni
Protein-protein interaction databases
IntActi | Q9RW50, 1 interactor |
MINTi | Q9RW50 |
STRINGi | 243230.DR_0819 |
Structurei
3D structure databases
SMRi | Q9RW50 |
ModBasei | Search... |
PDBe-KBi | Search... |
Miscellaneous databases
EvolutionaryTracei | Q9RW50 |
Family & Domainsi
Sequence similaritiesi
Phylogenomic databases
eggNOGi | COG1381, Bacteria |
HOGENOMi | CLU_1097202_0_0_0 |
InParanoidi | Q9RW50 |
OMAi | EWVALVM |
OrthoDBi | 1758685at2 |
Family and domain databases
HAMAPi | MF_00201, RecO, 1 hit |
InterProi | View protein in InterPro IPR037278, ARFGAP/RecO IPR022572, DNA_rep/recomb_RecO_N IPR012340, NA-bd_OB-fold IPR003717, RecO |
PANTHERi | PTHR33991, PTHR33991, 1 hit |
Pfami | View protein in Pfam PF02565, RecO_C, 1 hit PF11967, RecO_N, 1 hit |
SUPFAMi | SSF50249, SSF50249, 1 hit SSF57863, SSF57863, 1 hit |
TIGRFAMsi | TIGR00613, reco, 1 hit |
i Sequence
Sequence statusi: Complete.
Q9RW50-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MRSRTANRSG IVIRRRVTPA GDIIVTLLTP QGKLKAIARG GVKGPLSSSL
60 70 80 90 100
NLFHHVGVQV YQGPHNDLAS VKQAVLEGAL PTLAEPERYA FAHLMAEFAD
110 120 130 140 150
ALFQEGEFSE QAFDLFAASL RGVAHQPDPE WVALVMSYKL LGLAGVIPQT
160 170 180 190 200
ARCARCGAPD PEHPDPLGGQ LLCSKCAALP PYPPAVLDFL RHAVRRTVRA
210 220 230 240
SFEQPVPSAD RPALWRALEK FVTVQVGGVH SWRQLVPSGV PVLS
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AE000513 Genomic DNA Translation: AAF10403.1 |
PIRi | A75472 |
RefSeqi | NP_294543.1, NC_001263.1 WP_010887465.1, NZ_CP015081.1 |
Genome annotation databases
EnsemblBacteriai | AAF10403; AAF10403; DR_0819 |
KEGGi | dra:DR_0819 |
PATRICi | fig|243230.17.peg.1000 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AE000513 Genomic DNA Translation: AAF10403.1 |
PIRi | A75472 |
RefSeqi | NP_294543.1, NC_001263.1 WP_010887465.1, NZ_CP015081.1 |
3D structure databases
Select the link destinations: PDBei RCSB PDBi PDBji Links Updated | PDB entry | Method | Resolution (Å) | Chain | Positions | PDBsum |
1U5K | X-ray | 2.00 | A/B | 1-244 | [»] | |
1W3S | X-ray | 2.40 | A/B | 1-244 | [»] | |
2V1C | X-ray | 3.80 | C | 1-244 | [»] | |
4JCV | X-ray | 3.34 | E/F | 2-244 | [»] | |
SMRi | Q9RW50 | |||||
ModBasei | Search... | |||||
PDBe-KBi | Search... |
Protein-protein interaction databases
IntActi | Q9RW50, 1 interactor |
MINTi | Q9RW50 |
STRINGi | 243230.DR_0819 |
Genome annotation databases
EnsemblBacteriai | AAF10403; AAF10403; DR_0819 |
KEGGi | dra:DR_0819 |
PATRICi | fig|243230.17.peg.1000 |
Phylogenomic databases
eggNOGi | COG1381, Bacteria |
HOGENOMi | CLU_1097202_0_0_0 |
InParanoidi | Q9RW50 |
OMAi | EWVALVM |
OrthoDBi | 1758685at2 |
Miscellaneous databases
EvolutionaryTracei | Q9RW50 |
Family and domain databases
HAMAPi | MF_00201, RecO, 1 hit |
InterProi | View protein in InterPro IPR037278, ARFGAP/RecO IPR022572, DNA_rep/recomb_RecO_N IPR012340, NA-bd_OB-fold IPR003717, RecO |
PANTHERi | PTHR33991, PTHR33991, 1 hit |
Pfami | View protein in Pfam PF02565, RecO_C, 1 hit PF11967, RecO_N, 1 hit |
SUPFAMi | SSF50249, SSF50249, 1 hit SSF57863, SSF57863, 1 hit |
TIGRFAMsi | TIGR00613, reco, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | Q9RW50_DEIRA | |
Accessioni | Q9RW50Primary (citable) accession number: Q9RW50 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | May 1, 2000 |
Last sequence update: | May 1, 2000 | |
Last modified: | August 12, 2020 | |
This is version 131 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |