UniProtKB - Q9RSW7 (RL20_DEIRA)
Protein
50S ribosomal protein L20
Gene
rplT
Organism
Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
Status
Functioni
Binds directly to 23S rRNA, probably serving to organize its structure.
GO - Molecular functioni
- rRNA binding Source: UniProtKB-UniRule
- structural constituent of ribosome Source: GO_Central
GO - Biological processi
- ribosomal large subunit assembly Source: GO_Central
- translation Source: InterPro
Keywordsi
Molecular function | Ribonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding |
Names & Taxonomyi
Protein namesi | Recommended name: 50S ribosomal protein L20 |
Gene namesi | Name:rplT Ordered Locus Names:DR_2004 |
Organismi | Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) |
Taxonomic identifieri | 243230 [NCBI] |
Taxonomic lineagei | Bacteria › Deinococcus-Thermus › Deinococci › Deinococcales › Deinococcaceae › Deinococcus › |
Proteomesi |
|
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000177153 | 1 – 118 | 50S ribosomal protein L20Add BLAST | 118 |
Interactioni
Subunit structurei
Part of the 50S ribosomal subunit. Contacts proteins L13 and L21.
6 PublicationsProtein-protein interaction databases
STRINGi | 243230.DR_2004 |
Structurei
Secondary structure
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details3D structure databases
SMRi | Q9RSW7 |
ModBasei | Search... |
PDBe-KBi | Search... |
Miscellaneous databases
EvolutionaryTracei | Q9RSW7 |
Family & Domainsi
Sequence similaritiesi
Belongs to the bacterial ribosomal protein bL20 family.Curated
Phylogenomic databases
eggNOGi | COG0292, Bacteria |
HOGENOMi | CLU_123265_0_1_0 |
InParanoidi | Q9RSW7 |
OMAi | GRRKNVW |
OrthoDBi | 1932144at2 |
Family and domain databases
CDDi | cd07026, Ribosomal_L20, 1 hit |
Gene3Di | 1.10.1900.20, 1 hit |
HAMAPi | MF_00382, Ribosomal_L20, 1 hit |
InterProi | View protein in InterPro IPR005813, Ribosomal_L20 IPR035566, Ribosomal_protein_L20_C |
PANTHERi | PTHR10986, PTHR10986, 1 hit |
Pfami | View protein in Pfam PF00453, Ribosomal_L20, 1 hit |
PRINTSi | PR00062, RIBOSOMALL20 |
SUPFAMi | SSF74731, SSF74731, 1 hit |
TIGRFAMsi | TIGR01032, rplT_bact, 1 hit |
PROSITEi | View protein in PROSITE PS00937, RIBOSOMAL_L20, 1 hit |
i Sequence
Sequence statusi: Complete.
Q9RSW7-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MPRAKTGIVR RRRHKKVLKR AKGFWGSRSK QYRNAFQTLL NAATYEYRDR
60 70 80 90 100
RNKKRDFRRL WIQRINAGAR LHGMNYSTFI NGLKRANIDL NRKVLADIAA
110
REPEAFKALV DASRNARQ
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AE000513 Genomic DNA Translation: AAF11553.1 |
PIRi | A75326 |
RefSeqi | NP_295727.1, NC_001263.1 WP_010888637.1, NZ_CP015081.1 |
Genome annotation databases
EnsemblBacteriai | AAF11553; AAF11553; DR_2004 |
KEGGi | dra:DR_2004 |
PATRICi | fig|243230.17.peg.2227 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AE000513 Genomic DNA Translation: AAF11553.1 |
PIRi | A75326 |
RefSeqi | NP_295727.1, NC_001263.1 WP_010888637.1, NZ_CP015081.1 |
3D structure databases
Select the link destinations: PDBei RCSB PDBi PDBji Links Updated | PDB entry | Method | Resolution (Å) | Chain | Positions | PDBsum |
1NKW | X-ray | 3.10 | O | 1-118 | [»] | |
1NWX | X-ray | 3.50 | O | 1-118 | [»] | |
1NWY | X-ray | 3.30 | O | 1-118 | [»] | |
1SM1 | X-ray | 3.42 | O | 1-118 | [»] | |
1XBP | X-ray | 3.50 | O | 1-118 | [»] | |
2ZJP | X-ray | 3.70 | N | 1-118 | [»] | |
2ZJQ | X-ray | 3.30 | N | 1-118 | [»] | |
2ZJR | X-ray | 2.91 | N | 1-118 | [»] | |
3CF5 | X-ray | 3.30 | N | 1-118 | [»] | |
3DLL | X-ray | 3.50 | N | 1-118 | [»] | |
3PIO | X-ray | 3.25 | N | 1-118 | [»] | |
3PIP | X-ray | 3.45 | N | 1-118 | [»] | |
4IO9 | X-ray | 3.20 | N | 1-118 | [»] | |
4IOA | X-ray | 3.20 | N | 1-118 | [»] | |
4IOC | X-ray | 3.60 | N | 1-118 | [»] | |
4U67 | X-ray | 3.65 | N | 1-118 | [»] | |
4V49 | X-ray | 8.70 | O | 2-118 | [»] | |
4V4A | X-ray | 9.50 | O | 2-118 | [»] | |
4V4G | X-ray | 11.50 | R | 2-118 | [»] | |
4V4R | X-ray | 5.90 | BU | 1-118 | [»] | |
4V4S | X-ray | 6.76 | BU | 1-118 | [»] | |
4V4T | X-ray | 6.46 | U | 1-118 | [»] | |
4WFN | X-ray | 3.54 | N | 1-118 | [»] | |
5DM6 | X-ray | 2.90 | N | 2-118 | [»] | |
5DM7 | X-ray | 3.00 | N | 2-118 | [»] | |
5JVG | X-ray | 3.43 | N | 1-118 | [»] | |
5JVH | X-ray | 3.58 | N | 1-118 | [»] | |
SMRi | Q9RSW7 | |||||
ModBasei | Search... | |||||
PDBe-KBi | Search... |
Protein-protein interaction databases
STRINGi | 243230.DR_2004 |
Genome annotation databases
EnsemblBacteriai | AAF11553; AAF11553; DR_2004 |
KEGGi | dra:DR_2004 |
PATRICi | fig|243230.17.peg.2227 |
Phylogenomic databases
eggNOGi | COG0292, Bacteria |
HOGENOMi | CLU_123265_0_1_0 |
InParanoidi | Q9RSW7 |
OMAi | GRRKNVW |
OrthoDBi | 1932144at2 |
Miscellaneous databases
EvolutionaryTracei | Q9RSW7 |
Family and domain databases
CDDi | cd07026, Ribosomal_L20, 1 hit |
Gene3Di | 1.10.1900.20, 1 hit |
HAMAPi | MF_00382, Ribosomal_L20, 1 hit |
InterProi | View protein in InterPro IPR005813, Ribosomal_L20 IPR035566, Ribosomal_protein_L20_C |
PANTHERi | PTHR10986, PTHR10986, 1 hit |
Pfami | View protein in Pfam PF00453, Ribosomal_L20, 1 hit |
PRINTSi | PR00062, RIBOSOMALL20 |
SUPFAMi | SSF74731, SSF74731, 1 hit |
TIGRFAMsi | TIGR01032, rplT_bact, 1 hit |
PROSITEi | View protein in PROSITE PS00937, RIBOSOMAL_L20, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | RL20_DEIRA | |
Accessioni | Q9RSW7Primary (citable) accession number: Q9RSW7 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | June 1, 2001 |
Last sequence update: | May 1, 2000 | |
Last modified: | December 2, 2020 | |
This is version 129 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Prokaryotic Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
3D-structure, Direct protein sequencing, Reference proteomeDocuments
- PDB cross-references
Index of Protein Data Bank (PDB) cross-references - SIMILARITY comments
Index of protein domains and families - Ribosomal proteins
Ribosomal proteins families and list of entries