UniProtKB - Q9RSW6 (RL35_DEIRA)
Protein
50S ribosomal protein L35
Gene
rpmI
Organism
Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
Status
Functioni
Binds the 23S rRNA.
GO - Molecular functioni
- rRNA binding Source: UniProtKB-KW
- structural constituent of ribosome Source: GO_Central
GO - Biological processi
- translation Source: UniProtKB-UniRule
Keywordsi
Molecular function | Ribonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding |
Names & Taxonomyi
Protein namesi | Recommended name: 50S ribosomal protein L35 |
Gene namesi | Name:rpmI Ordered Locus Names:DR_2005 |
Organismi | Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) |
Taxonomic identifieri | 243230 [NCBI] |
Taxonomic lineagei | Bacteria › Deinococcus-Thermus › Deinococci › Deinococcales › Deinococcaceae › Deinococcus › |
Proteomesi |
|
Subcellular locationi
Cytosol
- cytosolic large ribosomal subunit Source: GO_Central
Other locations
- large ribosomal subunit Source: GO_Central
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Initiator methioninei | Removed | |||
ChainiPRO_0000177357 | 2 – 66 | 50S ribosomal protein L35Add BLAST | 65 |
Interactioni
Subunit structurei
Part of the 50S ribosomal subunit. Contacts proteins L15 and L33.
6 PublicationsProtein-protein interaction databases
STRINGi | 243230.DR_2005 |
Structurei
Secondary structure
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details3D structure databases
SMRi | Q9RSW6 |
ModBasei | Search... |
PDBe-KBi | Search... |
Miscellaneous databases
EvolutionaryTracei | Q9RSW6 |
Family & Domainsi
Sequence similaritiesi
Belongs to the bacterial ribosomal protein bL35 family.Curated
Phylogenomic databases
eggNOGi | COG0291, Bacteria |
HOGENOMi | CLU_169643_2_2_0 |
InParanoidi | Q9RSW6 |
OMAi | HLNWHKS |
OrthoDBi | 2046660at2 |
Family and domain databases
Gene3Di | 2.40.50.530, 1 hit |
HAMAPi | MF_00514, Ribosomal_L35, 1 hit |
InterProi | View protein in InterPro IPR021137, Ribosomal_L35 IPR018265, Ribosomal_L35_CS IPR001706, Ribosomal_L35_non-mt IPR037229, Ribosomal_L35_sf |
Pfami | View protein in Pfam PF01632, Ribosomal_L35p, 1 hit |
PRINTSi | PR00064, RIBOSOMALL35 |
SUPFAMi | SSF143034, SSF143034, 1 hit |
TIGRFAMsi | TIGR00001, rpmI_bact, 1 hit |
PROSITEi | View protein in PROSITE PS00936, RIBOSOMAL_L35, 1 hit |
i Sequence
Sequence statusi: Complete.
: The displayed sequence is further processed into a mature form. Sequence processingi
Q9RSW6-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MPKMKTHKMA KRRIKITGTG KVMAFKSGKR HQNTGKSGDE IRGKGKGFVL
60
AKAEWARMKL MLPRGK
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AE000513 Genomic DNA Translation: AAF11554.1 |
PIRi | B75326 |
RefSeqi | NP_295728.1, NC_001263.1 WP_010888638.1, NZ_CP015081.1 |
Genome annotation databases
EnsemblBacteriai | AAF11554; AAF11554; DR_2005 |
KEGGi | dra:DR_2005 |
PATRICi | fig|243230.17.peg.2228 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AE000513 Genomic DNA Translation: AAF11554.1 |
PIRi | B75326 |
RefSeqi | NP_295728.1, NC_001263.1 WP_010888638.1, NZ_CP015081.1 |
3D structure databases
Select the link destinations: PDBei RCSB PDBi PDBji Links Updated | PDB entry | Method | Resolution (Å) | Chain | Positions | PDBsum |
1NKW | X-ray | 3.10 | 3 | 1-64 | [»] | |
1NWX | X-ray | 3.50 | 3 | 2-66 | [»] | |
1NWY | X-ray | 3.30 | 3 | 2-66 | [»] | |
1SM1 | X-ray | 3.42 | 3 | 1-66 | [»] | |
1XBP | X-ray | 3.50 | 3 | 2-66 | [»] | |
2ZJP | X-ray | 3.70 | 3 | 1-66 | [»] | |
2ZJQ | X-ray | 3.30 | 3 | 1-66 | [»] | |
2ZJR | X-ray | 2.91 | 3 | 1-66 | [»] | |
3CF5 | X-ray | 3.30 | 3 | 1-66 | [»] | |
3DLL | X-ray | 3.50 | 3 | 1-66 | [»] | |
3PIO | X-ray | 3.25 | 3 | 1-66 | [»] | |
3PIP | X-ray | 3.45 | 3 | 1-66 | [»] | |
4IO9 | X-ray | 3.20 | 3 | 1-66 | [»] | |
4IOA | X-ray | 3.20 | 3 | 1-66 | [»] | |
4IOC | X-ray | 3.60 | 3 | 1-66 | [»] | |
4U67 | X-ray | 3.65 | 3 | 1-66 | [»] | |
4V49 | X-ray | 8.70 | 3 | 2-64 | [»] | |
4V4A | X-ray | 9.50 | 3 | 2-64 | [»] | |
4V4G | X-ray | 11.50 | 5 | 2-64 | [»] | |
4V4R | X-ray | 5.90 | B8 | 1-64 | [»] | |
4V4S | X-ray | 6.76 | B8 | 1-64 | [»] | |
4V4T | X-ray | 6.46 | 8 | 1-64 | [»] | |
4WFN | X-ray | 3.54 | 3 | 1-65 | [»] | |
5DM6 | X-ray | 2.90 | 3 | 2-66 | [»] | |
5DM7 | X-ray | 3.00 | 3 | 2-66 | [»] | |
5JVG | X-ray | 3.43 | 3 | 1-66 | [»] | |
5JVH | X-ray | 3.58 | 3 | 1-66 | [»] | |
SMRi | Q9RSW6 | |||||
ModBasei | Search... | |||||
PDBe-KBi | Search... |
Protein-protein interaction databases
STRINGi | 243230.DR_2005 |
Genome annotation databases
EnsemblBacteriai | AAF11554; AAF11554; DR_2005 |
KEGGi | dra:DR_2005 |
PATRICi | fig|243230.17.peg.2228 |
Phylogenomic databases
eggNOGi | COG0291, Bacteria |
HOGENOMi | CLU_169643_2_2_0 |
InParanoidi | Q9RSW6 |
OMAi | HLNWHKS |
OrthoDBi | 2046660at2 |
Miscellaneous databases
EvolutionaryTracei | Q9RSW6 |
Family and domain databases
Gene3Di | 2.40.50.530, 1 hit |
HAMAPi | MF_00514, Ribosomal_L35, 1 hit |
InterProi | View protein in InterPro IPR021137, Ribosomal_L35 IPR018265, Ribosomal_L35_CS IPR001706, Ribosomal_L35_non-mt IPR037229, Ribosomal_L35_sf |
Pfami | View protein in Pfam PF01632, Ribosomal_L35p, 1 hit |
PRINTSi | PR00064, RIBOSOMALL35 |
SUPFAMi | SSF143034, SSF143034, 1 hit |
TIGRFAMsi | TIGR00001, rpmI_bact, 1 hit |
PROSITEi | View protein in PROSITE PS00936, RIBOSOMAL_L35, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | RL35_DEIRA | |
Accessioni | Q9RSW6Primary (citable) accession number: Q9RSW6 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | January 23, 2002 |
Last sequence update: | January 23, 2007 | |
Last modified: | April 7, 2021 | |
This is version 125 of the entry and version 3 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Prokaryotic Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
3D-structure, Direct protein sequencing, Reference proteomeDocuments
- Ribosomal proteins
Ribosomal proteins families and list of entries - PDB cross-references
Index of Protein Data Bank (PDB) cross-references - SIMILARITY comments
Index of protein domains and families