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UniProtKB - Q9RSS7 (RL11_DEIRA)
Protein
50S ribosomal protein L11
Gene
rplK
Organism
Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
Status
Functioni
Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
CuratedGO - Molecular functioni
- large ribosomal subunit rRNA binding Source: GO_Central
- structural constituent of ribosome Source: GO_Central
GO - Biological processi
- translation Source: GO_Central
Keywordsi
Molecular function | Ribonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding |
Names & Taxonomyi
Protein namesi | Recommended name: 50S ribosomal protein L11UniRule annotation |
Gene namesi | Name:rplKUniRule annotation Ordered Locus Names:DR_2046 |
Organismi | Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) |
Taxonomic identifieri | 243230 [NCBI] |
Taxonomic lineagei | Bacteria › Deinococcus-Thermus › Deinococci › Deinococcales › Deinococcaceae › Deinococcus › |
Proteomesi |
|
Subcellular locationi
Cytosol
- cytosolic large ribosomal subunit Source: GO_Central
Other locations
- large ribosomal subunit Source: GO_Central
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000104280 | 1 – 144 | 50S ribosomal protein L11Add BLAST | 144 |
Post-translational modificationi
One or more lysine residues are methylated.UniRule annotation
Keywords - PTMi
MethylationInteractioni
Subunit structurei
Part of the ribosomal stalk of the 50S ribosomal subunit.
Interacts with L10 and the large rRNA to form the base of the stalk. L10 forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex (By similarity). Contacts the CTC protein (RL25).
UniRule annotation6 PublicationsProtein-protein interaction databases
IntActi | Q9RSS7, 29 interactors |
STRINGi | 243230.DR_2046 |
Structurei
Secondary structure
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details3D structure databases
SMRi | Q9RSS7 |
ModBasei | Search... |
PDBe-KBi | Search... |
Miscellaneous databases
EvolutionaryTracei | Q9RSS7 |
Family & Domainsi
Sequence similaritiesi
Belongs to the universal ribosomal protein uL11 family.UniRule annotation
Phylogenomic databases
eggNOGi | COG0080, Bacteria |
HOGENOMi | CLU_074237_2_1_0 |
InParanoidi | Q9RSS7 |
OMAi | CKQFNAK |
OrthoDBi | 1702697at2 |
Family and domain databases
CDDi | cd00349, Ribosomal_L11, 1 hit |
Gene3Di | 1.10.10.250, 1 hit 3.30.1550.10, 1 hit |
HAMAPi | MF_00736, Ribosomal_L11, 1 hit |
InterProi | View protein in InterPro IPR000911, Ribosomal_L11/L12 IPR036796, Ribosomal_L11/L12_N_sf IPR006519, Ribosomal_L11_bac-typ IPR020783, Ribosomal_L11_C IPR036769, Ribosomal_L11_C_sf IPR020785, Ribosomal_L11_CS IPR020784, Ribosomal_L11_N |
PANTHERi | PTHR11661, PTHR11661, 1 hit |
Pfami | View protein in Pfam PF00298, Ribosomal_L11, 1 hit PF03946, Ribosomal_L11_N, 1 hit |
SMARTi | View protein in SMART SM00649, RL11, 1 hit |
SUPFAMi | SSF46906, SSF46906, 1 hit SSF54747, SSF54747, 1 hit |
TIGRFAMsi | TIGR01632, L11_bact, 1 hit |
PROSITEi | View protein in PROSITE PS00359, RIBOSOMAL_L11, 1 hit |
i Sequence
Sequence statusi: Complete.
Q9RSS7-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MKKVAGIVKL QLPAGKATPA PPVGPALGQY GANIMEFTKA FNAQTADKGD
60 70 80 90 100
AIIPVEITIY ADRSFTFITK TPPMSYLIRK AAGIGKGSST PNKAKVGKLN
110 120 130 140
WDQVLEIAKT KMPDLNAGSV EAAANTVAGT ARSMGVTVEG GPNA
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AE000513 Genomic DNA Translation: AAF11593.1 |
PIRi | G75323 |
RefSeqi | NP_295769.1, NC_001263.1 WP_010888678.1, NZ_CP015081.1 |
Genome annotation databases
EnsemblBacteriai | AAF11593; AAF11593; DR_2046 |
KEGGi | dra:DR_2046 |
PATRICi | fig|243230.17.peg.2273 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AE000513 Genomic DNA Translation: AAF11593.1 |
PIRi | G75323 |
RefSeqi | NP_295769.1, NC_001263.1 WP_010888678.1, NZ_CP015081.1 |
3D structure databases
Select the link destinations: PDBei RCSB PDBi PDBji Links Updated | PDB entry | Method | Resolution (Å) | Chain | Positions | PDBsum |
1NKW | X-ray | 3.10 | G | 1-144 | [»] | |
1NWX | X-ray | 3.50 | G | 1-144 | [»] | |
1NWY | X-ray | 3.30 | G | 1-144 | [»] | |
1SM1 | X-ray | 3.42 | G | 1-144 | [»] | |
1XBP | X-ray | 3.50 | G | 1-144 | [»] | |
2ZJP | X-ray | 3.70 | F | 1-144 | [»] | |
2ZJQ | X-ray | 3.30 | F | 1-144 | [»] | |
2ZJR | X-ray | 2.91 | F | 1-144 | [»] | |
3CF5 | X-ray | 3.30 | F | 1-144 | [»] | |
3DLL | X-ray | 3.50 | F | 1-144 | [»] | |
3PIO | X-ray | 3.25 | F | 1-144 | [»] | |
3PIP | X-ray | 3.45 | F | 1-144 | [»] | |
4IO9 | X-ray | 3.20 | F | 1-144 | [»] | |
4IOA | X-ray | 3.20 | F | 1-144 | [»] | |
4IOC | X-ray | 3.60 | F | 1-144 | [»] | |
4V49 | X-ray | 8.70 | G | 1-143 | [»] | |
4V4A | X-ray | 9.50 | G | 1-143 | [»] | |
4V4G | X-ray | 11.50 | J | 1-143 | [»] | |
5DM6 | X-ray | 2.90 | F | 4-144 | [»] | |
5DM7 | X-ray | 3.00 | F | 1-144 | [»] | |
5JVG | X-ray | 3.43 | F | 1-144 | [»] | |
SMRi | Q9RSS7 | |||||
ModBasei | Search... | |||||
PDBe-KBi | Search... |
Protein-protein interaction databases
IntActi | Q9RSS7, 29 interactors |
STRINGi | 243230.DR_2046 |
Genome annotation databases
EnsemblBacteriai | AAF11593; AAF11593; DR_2046 |
KEGGi | dra:DR_2046 |
PATRICi | fig|243230.17.peg.2273 |
Phylogenomic databases
eggNOGi | COG0080, Bacteria |
HOGENOMi | CLU_074237_2_1_0 |
InParanoidi | Q9RSS7 |
OMAi | CKQFNAK |
OrthoDBi | 1702697at2 |
Miscellaneous databases
EvolutionaryTracei | Q9RSS7 |
Family and domain databases
CDDi | cd00349, Ribosomal_L11, 1 hit |
Gene3Di | 1.10.10.250, 1 hit 3.30.1550.10, 1 hit |
HAMAPi | MF_00736, Ribosomal_L11, 1 hit |
InterProi | View protein in InterPro IPR000911, Ribosomal_L11/L12 IPR036796, Ribosomal_L11/L12_N_sf IPR006519, Ribosomal_L11_bac-typ IPR020783, Ribosomal_L11_C IPR036769, Ribosomal_L11_C_sf IPR020785, Ribosomal_L11_CS IPR020784, Ribosomal_L11_N |
PANTHERi | PTHR11661, PTHR11661, 1 hit |
Pfami | View protein in Pfam PF00298, Ribosomal_L11, 1 hit PF03946, Ribosomal_L11_N, 1 hit |
SMARTi | View protein in SMART SM00649, RL11, 1 hit |
SUPFAMi | SSF46906, SSF46906, 1 hit SSF54747, SSF54747, 1 hit |
TIGRFAMsi | TIGR01632, L11_bact, 1 hit |
PROSITEi | View protein in PROSITE PS00359, RIBOSOMAL_L11, 1 hit |
MobiDBi | Search... |
Entry informationi
Entry namei | RL11_DEIRA | |
Accessioni | Q9RSS7Primary (citable) accession number: Q9RSS7 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | November 28, 2003 |
Last sequence update: | May 1, 2000 | |
Last modified: | June 2, 2021 | |
This is version 127 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Prokaryotic Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
3D-structure, Direct protein sequencing, Reference proteomeDocuments
- Ribosomal proteins
Ribosomal proteins families and list of entries - PDB cross-references
Index of Protein Data Bank (PDB) cross-references - SIMILARITY comments
Index of protein domains and families