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UniProtKB - Q9RSS4 (RL33_DEIRA)
Protein
50S ribosomal protein L33
Gene
rpmG
Organism
Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
Status
Functioni
Binds the 23S rRNA and the E site tRNA.
GO - Molecular functioni
- rRNA binding Source: UniProtKB-KW
- structural constituent of ribosome Source: GO_Central
- tRNA binding Source: UniProtKB-KW
GO - Biological processi
- translation Source: UniProtKB-UniRule
Keywordsi
Molecular function | Ribonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding, tRNA-binding |
Names & Taxonomyi
Protein namesi | Recommended name: 50S ribosomal protein L33 |
Gene namesi | Name:rpmG Ordered Locus Names:DR_2049 |
Organismi | Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) |
Taxonomic identifieri | 243230 [NCBI] |
Taxonomic lineagei | Bacteria › Deinococcus-Thermus › Deinococci › Deinococcales › Deinococcaceae › Deinococcus › |
Proteomesi |
|
Subcellular locationi
Cytosol
- cytosolic large ribosomal subunit Source: GO_Central
Other locations
- large ribosomal subunit Source: GO_Central
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000170157 | 1 – 55 | 50S ribosomal protein L33Add BLAST | 55 |
Interactioni
Subunit structurei
Part of the 50S ribosomal subunit. Contacts protein L35.
6 PublicationsProtein-protein interaction databases
IntActi | Q9RSS4, 1 interactor |
STRINGi | 243230.DR_2049 |
Structurei
Secondary structure
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details3D structure databases
AlphaFoldDBi | Q9RSS4 |
SMRi | Q9RSS4 |
ModBasei | Search... |
PDBe-KBi | Search... |
Miscellaneous databases
EvolutionaryTracei | Q9RSS4 |
Family & Domainsi
Sequence similaritiesi
Belongs to the bacterial ribosomal protein bL33 family.Curated
Phylogenomic databases
eggNOGi | COG0267, Bacteria |
HOGENOMi | CLU_190949_1_1_0 |
InParanoidi | Q9RSS4 |
OMAi | GTGFYYT |
OrthoDBi | 2034291at2 |
Family and domain databases
Gene3Di | 2.20.28.120, 1 hit |
HAMAPi | MF_00294, Ribosomal_L33, 1 hit |
InterProi | View protein in InterPro IPR038584, L33_sf IPR001705, Ribosomal_L33 IPR018264, Ribosomal_L33_CS IPR011332, Ribosomal_zn-bd |
Pfami | View protein in Pfam PF00471, Ribosomal_L33, 1 hit |
SUPFAMi | SSF57829, SSF57829, 1 hit |
TIGRFAMsi | TIGR01023, rpmG_bact, 1 hit |
PROSITEi | View protein in PROSITE PS00582, RIBOSOMAL_L33, 1 hit |
i Sequence
Sequence statusi: Complete.
Q9RSS4-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MAKDGPRIIV KMESSAGTGF YYTTTKNRRN TQAKLELKKY DPVAKKHVVF
REKKV
Sequence cautioni
The sequence AAF11599 differs from that shown. Reason: Erroneous initiation.Curated
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AE000513 Genomic DNA Translation: AAF11599.1 Different initiation. |
PIRi | D75321 |
RefSeqi | NP_295772.2, NC_001263.1 WP_010888681.1, NZ_CP015081.1 |
Genome annotation databases
EnsemblBacteriai | AAF11599; AAF11599; DR_2049 |
KEGGi | dra:DR_2049 |
PATRICi | fig|243230.17.peg.2276 |
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AE000513 Genomic DNA Translation: AAF11599.1 Different initiation. |
PIRi | D75321 |
RefSeqi | NP_295772.2, NC_001263.1 WP_010888681.1, NZ_CP015081.1 |
3D structure databases
Select the link destinations: PDBei RCSB PDBi PDBji Links Updated | PDB entry | Method | Resolution (Å) | Chain | Positions | PDBsum |
1NKW | X-ray | 3.10 | 1 | 1-55 | [»] | |
1NWX | X-ray | 3.50 | 1 | 1-55 | [»] | |
1NWY | X-ray | 3.30 | 1 | 1-55 | [»] | |
1SM1 | X-ray | 3.42 | 1 | 1-55 | [»] | |
1XBP | X-ray | 3.50 | 1 | 1-55 | [»] | |
2ZJP | X-ray | 3.70 | 1 | 1-55 | [»] | |
2ZJQ | X-ray | 3.30 | 1 | 1-55 | [»] | |
2ZJR | X-ray | 2.91 | 1 | 1-55 | [»] | |
3CF5 | X-ray | 3.30 | 1 | 1-55 | [»] | |
3DLL | X-ray | 3.50 | 1 | 1-55 | [»] | |
3PIO | X-ray | 3.25 | 1 | 1-55 | [»] | |
3PIP | X-ray | 3.45 | 1 | 1-55 | [»] | |
4IO9 | X-ray | 3.20 | 1 | 1-55 | [»] | |
4IOA | X-ray | 3.20 | 1 | 1-55 | [»] | |
4IOC | X-ray | 3.60 | 1 | 1-55 | [»] | |
4U67 | X-ray | 3.65 | 1 | 1-55 | [»] | |
4V49 | X-ray | 8.70 | 1 | 2-54 | [»] | |
4V4A | X-ray | 9.50 | 1 | 2-54 | [»] | |
4V4G | X-ray | 11.50 | 3 | 2-54 | [»] | |
4V4R | X-ray | 5.90 | 6 | 1-55 | [»] | |
4V4S | X-ray | 6.76 | 6 | 1-55 | [»] | |
4V4T | X-ray | 6.46 | 6 | 1-55 | [»] | |
4WFN | X-ray | 3.54 | 1 | 1-55 | [»] | |
5DM6 | X-ray | 2.90 | 1 | 6-50 | [»] | |
5DM7 | X-ray | 3.00 | 1 | 6-49 | [»] | |
5JVG | X-ray | 3.43 | 1 | 1-55 | [»] | |
5JVH | X-ray | 3.58 | 1 | 2-55 | [»] | |
7A0R | X-ray | 3.30 | 1 | 6-54 | [»] | |
7A0S | X-ray | 3.22 | 1 | 6-54 | [»] | |
7A18 | X-ray | 3.40 | 1 | 6-54 | [»] | |
AlphaFoldDBi | Q9RSS4 | |||||
SMRi | Q9RSS4 | |||||
ModBasei | Search... | |||||
PDBe-KBi | Search... |
Protein-protein interaction databases
IntActi | Q9RSS4, 1 interactor |
STRINGi | 243230.DR_2049 |
Genome annotation databases
EnsemblBacteriai | AAF11599; AAF11599; DR_2049 |
KEGGi | dra:DR_2049 |
PATRICi | fig|243230.17.peg.2276 |
Phylogenomic databases
eggNOGi | COG0267, Bacteria |
HOGENOMi | CLU_190949_1_1_0 |
InParanoidi | Q9RSS4 |
OMAi | GTGFYYT |
OrthoDBi | 2034291at2 |
Miscellaneous databases
EvolutionaryTracei | Q9RSS4 |
Family and domain databases
Gene3Di | 2.20.28.120, 1 hit |
HAMAPi | MF_00294, Ribosomal_L33, 1 hit |
InterProi | View protein in InterPro IPR038584, L33_sf IPR001705, Ribosomal_L33 IPR018264, Ribosomal_L33_CS IPR011332, Ribosomal_zn-bd |
Pfami | View protein in Pfam PF00471, Ribosomal_L33, 1 hit |
SUPFAMi | SSF57829, SSF57829, 1 hit |
TIGRFAMsi | TIGR01023, rpmG_bact, 1 hit |
PROSITEi | View protein in PROSITE PS00582, RIBOSOMAL_L33, 1 hit |
MobiDBi | Search... |
Entry informationi
Entry namei | RL33_DEIRA | |
Accessioni | Q9RSS4Primary (citable) accession number: Q9RSS4 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | January 11, 2001 |
Last sequence update: | January 11, 2001 | |
Last modified: | May 25, 2022 | |
This is version 129 of the entry and version 2 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Prokaryotic Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
3D-structure, Direct protein sequencing, Reference proteomeDocuments
- Ribosomal proteins
Ribosomal proteins families and list of entries - PDB cross-references
Index of Protein Data Bank (PDB) cross-references - SIMILARITY comments
Index of protein domains and families