UniProtKB - Q9RSJ5 (RL17_DEIRA)
Protein
50S ribosomal protein L17
Gene
rplQ
Organism
Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
Status
Functioni
Binds to the 23S rRNA.
GO - Molecular functioni
- rRNA binding Source: UniProtKB-KW
- structural constituent of ribosome Source: GO_Central
GO - Biological processi
- translation Source: UniProtKB-UniRule
Keywordsi
Molecular function | Ribonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding |
Names & Taxonomyi
Protein namesi | Recommended name: 50S ribosomal protein L17UniRule annotation |
Gene namesi | Name:rplQUniRule annotation Ordered Locus Names:DR_2129 |
Organismi | Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) |
Taxonomic identifieri | 243230 [NCBI] |
Taxonomic lineagei | Bacteria › Deinococcus-Thermus › Deinococci › Deinococcales › Deinococcaceae › Deinococcus › |
Proteomesi |
|
Subcellular locationi
GO - Cellular componenti
- cytosolic large ribosomal subunit Source: GO_Central
- large ribosomal subunit Source: GO_Central
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000175523 | 1 – 116 | 50S ribosomal protein L17Add BLAST | 116 |
Interactioni
Subunit structurei
Part of the 50S ribosomal subunit. Contacts proteins L3 and L32.
6 PublicationsProtein-protein interaction databases
STRINGi | 243230.DR_2129 |
Structurei
Secondary structure
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details3D structure databases
SMRi | Q9RSJ5 |
ModBasei | Search... |
PDBe-KBi | Search... |
Miscellaneous databases
EvolutionaryTracei | Q9RSJ5 |
Family & Domainsi
Sequence similaritiesi
Belongs to the bacterial ribosomal protein bL17 family.UniRule annotation
Phylogenomic databases
eggNOGi | COG0203, Bacteria |
HOGENOMi | CLU_074407_2_0_0 |
InParanoidi | Q9RSJ5 |
OMAi | KQFVEPL |
OrthoDBi | 1838961at2 |
Family and domain databases
Gene3Di | 3.90.1030.10, 1 hit |
HAMAPi | MF_01368, Ribosomal_L17, 1 hit |
InterProi | View protein in InterPro IPR000456, Ribosomal_L17 IPR036373, Ribosomal_L17_sf |
PANTHERi | PTHR14413, PTHR14413, 1 hit |
Pfami | View protein in Pfam PF01196, Ribosomal_L17, 1 hit |
SUPFAMi | SSF64263, SSF64263, 1 hit |
TIGRFAMsi | TIGR00059, L17, 1 hit |
PROSITEi | View protein in PROSITE PS01167, RIBOSOMAL_L17, 1 hit |
i Sequence
Sequence statusi: Complete.
Q9RSJ5-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MRHGKAGRKL NRNSSARVAL ARAQATALLR EGRIQTTLTK AKELRPFVEQ
60 70 80 90 100
LITTAKGGDL HSRRLVAQDI HDKDVVRKVM DEVAPKYAER PGGYTRILRV
110
GTRRGDGVTM ALIELV
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AE000513 Genomic DNA Translation: AAF11679.1 |
PIRi | B75313 |
RefSeqi | NP_295852.1, NC_001263.1 WP_010888760.1, NZ_CP015081.1 |
Genome annotation databases
EnsemblBacteriai | AAF11679; AAF11679; DR_2129 |
KEGGi | dra:DR_2129 |
PATRICi | fig|243230.17.peg.2352 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AE000513 Genomic DNA Translation: AAF11679.1 |
PIRi | B75313 |
RefSeqi | NP_295852.1, NC_001263.1 WP_010888760.1, NZ_CP015081.1 |
3D structure databases
Select the link destinations: PDBei RCSB PDBi PDBji Links Updated | PDB entry | Method | Resolution (Å) | Chain | Positions | PDBsum |
1NKW | X-ray | 3.10 | L | 1-116 | [»] | |
1NWX | X-ray | 3.50 | L | 1-116 | [»] | |
1NWY | X-ray | 3.30 | L | 1-116 | [»] | |
1SM1 | X-ray | 3.42 | L | 1-116 | [»] | |
1XBP | X-ray | 3.50 | L | 1-116 | [»] | |
2ZJP | X-ray | 3.70 | K | 1-116 | [»] | |
2ZJQ | X-ray | 3.30 | K | 1-116 | [»] | |
2ZJR | X-ray | 2.91 | K | 1-116 | [»] | |
3CF5 | X-ray | 3.30 | K | 1-116 | [»] | |
3DLL | X-ray | 3.50 | K | 1-116 | [»] | |
3PIO | X-ray | 3.25 | K | 1-116 | [»] | |
3PIP | X-ray | 3.45 | K | 1-116 | [»] | |
4IO9 | X-ray | 3.20 | K | 1-116 | [»] | |
4IOA | X-ray | 3.20 | K | 1-116 | [»] | |
4IOC | X-ray | 3.60 | K | 1-116 | [»] | |
4U67 | X-ray | 3.65 | K | 1-116 | [»] | |
4V49 | X-ray | 8.70 | L | 3-116 | [»] | |
4V4A | X-ray | 9.50 | L | 3-116 | [»] | |
4V4G | X-ray | 11.50 | O | 3-116 | [»] | |
4WFN | X-ray | 3.54 | K | 1-116 | [»] | |
5DM6 | X-ray | 2.90 | K | 3-115 | [»] | |
5DM7 | X-ray | 3.00 | K | 3-115 | [»] | |
5JVG | X-ray | 3.43 | K | 1-116 | [»] | |
5JVH | X-ray | 3.58 | K | 1-116 | [»] | |
SMRi | Q9RSJ5 | |||||
ModBasei | Search... | |||||
PDBe-KBi | Search... |
Protein-protein interaction databases
STRINGi | 243230.DR_2129 |
Genome annotation databases
EnsemblBacteriai | AAF11679; AAF11679; DR_2129 |
KEGGi | dra:DR_2129 |
PATRICi | fig|243230.17.peg.2352 |
Phylogenomic databases
eggNOGi | COG0203, Bacteria |
HOGENOMi | CLU_074407_2_0_0 |
InParanoidi | Q9RSJ5 |
OMAi | KQFVEPL |
OrthoDBi | 1838961at2 |
Miscellaneous databases
EvolutionaryTracei | Q9RSJ5 |
Family and domain databases
Gene3Di | 3.90.1030.10, 1 hit |
HAMAPi | MF_01368, Ribosomal_L17, 1 hit |
InterProi | View protein in InterPro IPR000456, Ribosomal_L17 IPR036373, Ribosomal_L17_sf |
PANTHERi | PTHR14413, PTHR14413, 1 hit |
Pfami | View protein in Pfam PF01196, Ribosomal_L17, 1 hit |
SUPFAMi | SSF64263, SSF64263, 1 hit |
TIGRFAMsi | TIGR00059, L17, 1 hit |
PROSITEi | View protein in PROSITE PS01167, RIBOSOMAL_L17, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | RL17_DEIRA | |
Accessioni | Q9RSJ5Primary (citable) accession number: Q9RSJ5 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | March 15, 2004 |
Last sequence update: | May 1, 2000 | |
Last modified: | December 2, 2020 | |
This is version 118 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Prokaryotic Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
3D-structure, Direct protein sequencing, Reference proteomeDocuments
- Ribosomal proteins
Ribosomal proteins families and list of entries - PDB cross-references
Index of Protein Data Bank (PDB) cross-references - SIMILARITY comments
Index of protein domains and families