UniProtKB - Q9RRG8 (RL28_DEIRA)
Protein
50S ribosomal protein L28
Gene
rpmB
Organism
Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
Status
Functioni
GO - Molecular functioni
- structural constituent of ribosome Source: InterPro
GO - Biological processi
- translation Source: UniProtKB-UniRule
Keywordsi
Molecular function | Ribonucleoprotein, Ribosomal protein |
Names & Taxonomyi
Protein namesi | Recommended name: 50S ribosomal protein L28UniRule annotation |
Gene namesi | Name:rpmBUniRule annotation Ordered Locus Names:DR_2524 |
Organismi | Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) |
Taxonomic identifieri | 243230 [NCBI] |
Taxonomic lineagei | Bacteria › Deinococcus-Thermus › Deinococci › Deinococcales › Deinococcaceae › Deinococcus › |
Proteomesi |
|
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000178465 | 1 – 81 | 50S ribosomal protein L28Add BLAST | 81 |
Interactioni
Subunit structurei
Part of the 50S ribosomal subunit.
Protein-protein interaction databases
STRINGi | 243230.DR_2524 |
Structurei
Secondary structure
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details3D structure databases
SMRi | Q9RRG8 |
ModBasei | Search... |
PDBe-KBi | Search... |
Miscellaneous databases
EvolutionaryTracei | Q9RRG8 |
Family & Domainsi
Sequence similaritiesi
Belongs to the bacterial ribosomal protein bL28 family.UniRule annotation
Phylogenomic databases
eggNOGi | COG0227, Bacteria |
HOGENOMi | CLU_064548_6_0_0 |
OMAi | RECYLTG |
OrthoDBi | 2062238at2 |
Family and domain databases
Gene3Di | 2.30.170.40, 1 hit |
HAMAPi | MF_00373, Ribosomal_L28, 1 hit |
InterProi | View protein in InterPro IPR034704, L28p-like IPR026569, Ribo_L28/L24 IPR037147, Ribo_L28/L24_sf IPR001383, Ribosomal_L28 |
Pfami | View protein in Pfam PF00830, Ribosomal_L28, 1 hit |
SUPFAMi | SSF143800, SSF143800, 1 hit |
TIGRFAMsi | TIGR00009, L28, 1 hit |
i Sequence
Sequence statusi: Complete.
Q9RRG8-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MSRECYLTGK KNLVVNSVIR RGKARADGGV GRKTTGITKR VQRANLHKKA
60 70 80
IRENGQVKTV WLSANALRTL SKGPYKGIEL I
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AE000513 Genomic DNA Translation: AAF12065.1 |
PIRi | C75262 |
RefSeqi | NP_296244.1, NC_001263.1 WP_010889149.1, NZ_CP015081.1 |
Genome annotation databases
EnsemblBacteriai | AAF12065; AAF12065; DR_2524 |
KEGGi | dra:DR_2524 |
PATRICi | fig|243230.17.peg.2766 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AE000513 Genomic DNA Translation: AAF12065.1 |
PIRi | C75262 |
RefSeqi | NP_296244.1, NC_001263.1 WP_010889149.1, NZ_CP015081.1 |
3D structure databases
Select the link destinations: PDBei RCSB PDBi PDBji Links Updated | PDB entry | Method | Resolution (Å) | Chain | Positions | PDBsum |
2ZJP | X-ray | 3.70 | U | 1-81 | [»] | |
2ZJQ | X-ray | 3.30 | U | 1-81 | [»] | |
2ZJR | X-ray | 2.91 | U | 1-81 | [»] | |
3CF5 | X-ray | 3.30 | U | 1-81 | [»] | |
3DLL | X-ray | 3.50 | U | 1-81 | [»] | |
3PIO | X-ray | 3.25 | U | 1-81 | [»] | |
3PIP | X-ray | 3.45 | U | 1-81 | [»] | |
4IO9 | X-ray | 3.20 | U | 1-81 | [»] | |
4IOA | X-ray | 3.20 | U | 1-81 | [»] | |
4IOC | X-ray | 3.60 | U | 1-81 | [»] | |
4U67 | X-ray | 3.65 | U | 1-81 | [»] | |
4WFN | X-ray | 3.54 | U | 1-81 | [»] | |
5DM6 | X-ray | 2.90 | U | 8-79 | [»] | |
5DM7 | X-ray | 3.00 | U | 8-79 | [»] | |
5JVG | X-ray | 3.43 | U | 1-81 | [»] | |
5JVH | X-ray | 3.58 | U | 1-81 | [»] | |
SMRi | Q9RRG8 | |||||
ModBasei | Search... | |||||
PDBe-KBi | Search... |
Protein-protein interaction databases
STRINGi | 243230.DR_2524 |
Genome annotation databases
EnsemblBacteriai | AAF12065; AAF12065; DR_2524 |
KEGGi | dra:DR_2524 |
PATRICi | fig|243230.17.peg.2766 |
Phylogenomic databases
eggNOGi | COG0227, Bacteria |
HOGENOMi | CLU_064548_6_0_0 |
OMAi | RECYLTG |
OrthoDBi | 2062238at2 |
Miscellaneous databases
EvolutionaryTracei | Q9RRG8 |
Family and domain databases
Gene3Di | 2.30.170.40, 1 hit |
HAMAPi | MF_00373, Ribosomal_L28, 1 hit |
InterProi | View protein in InterPro IPR034704, L28p-like IPR026569, Ribo_L28/L24 IPR037147, Ribo_L28/L24_sf IPR001383, Ribosomal_L28 |
Pfami | View protein in Pfam PF00830, Ribosomal_L28, 1 hit |
SUPFAMi | SSF143800, SSF143800, 1 hit |
TIGRFAMsi | TIGR00009, L28, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | RL28_DEIRA | |
Accessioni | Q9RRG8Primary (citable) accession number: Q9RRG8 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | June 1, 2001 |
Last sequence update: | May 1, 2000 | |
Last modified: | December 2, 2020 | |
This is version 107 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Prokaryotic Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
3D-structure, Reference proteomeDocuments
- PDB cross-references
Index of Protein Data Bank (PDB) cross-references - SIMILARITY comments
Index of protein domains and families - Ribosomal proteins
Ribosomal proteins families and list of entries