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Protein
Submitted name:

DNA-3-methyladenine glycosidase

Gene

tag

Organism
Staphylococcus aureus
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Function’ section indicates at which position the protein binds a given metal ion. The nature of the metal is indicated in the ‘Description’ field.<p><a href='/help/metal' target='_top'>More...</a></p>Metal bindingi4ZincCombined sources1
Metal bindingi17Zinc; via tele nitrogenCombined sources1
Metal bindingi175Zinc; via pros nitrogenCombined sources1
Metal bindingi179ZincCombined sources1

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionGlycosidaseImported, Hydrolase
LigandMetal-bindingCombined sources, ZincCombined sources

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
DNA-3-methyladenine glycosidaseImported
Submitted name:
DNA-3-methyladenine glycosylaseImported (EC:3.2.2.20Imported)
Submitted name:
DNA-3-methyladenine glycosylase IImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:tagImported
Synonyms:tag_2Imported
ORF Names:BTN44_03825Imported, EP54_09265Imported, EQ90_02405Imported, NCTC10702_02609Imported, NCTC11940_01598Imported, NCTC13131_06387Imported, NCTC13812_01762Imported, NCTC9944_01688Imported, RK64_08870Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiStaphylococcus aureusImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri1280 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesStaphylococcaceaeStaphylococcus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000248832 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 1
  • UP000251686 Componenti: Unassembled WGS sequence
  • UP000035281 Componenti: Chromosome
  • UP000254674 Componenti: Unassembled WGS sequence
  • UP000236484 Componenti: Chromosome
  • UP000249446 Componenti: Chromosome 1

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG4108R3E Bacteria
COG2818 LUCA

KEGG Orthology (KO)

More...
KOi
K01246

Family and domain databases

Integrated resource of protein families, domains and functional sites

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InterProi
View protein in InterPro
IPR005019 Adenine_glyco
IPR011257 DNA_glycosylase

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF03352 Adenine_glyco, 1 hit

Superfamily database of structural and functional annotation

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SUPFAMi
SSF48150 SSF48150, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q9RL93-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MNECAFGTKD PVYLDYHDHV WGQPLYDSKA LFKLLALESQ HAGLSWLTIL
60 70 80 90 100
KKKEAYEEAF YDFEPEKVAQ MTAQDIDRLM TFPNIVHHRK KLEAIVNQAQ
110 120 130 140 150
GYLKIEQAYG SFSKFLWSYV NGKPKDLQYE HASDRITVDD TATQLSKDLK
160 170 180
QYGFKFLGPV TVFSFLEAAG LYDAHLQDCP SKPKHN
Length:186
Mass (Da):21,416
Last modified:May 1, 2000 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i7C4D85CE4E0A6BA9
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
CP018629 Genomic DNA Translation: AUS74394.1
CP026962 Genomic DNA Translation: AVG64313.1
Y18635 Genomic DNA Translation: CAB60736.1
LALJ01000004 Genomic DNA Translation: KMR37935.1
LALQ01000038 Genomic DNA Translation: KMR56739.1
UAUZ01000013 Genomic DNA Translation: SQA20031.1
LS483309 Genomic DNA Translation: SQE61604.1
LS483350 Genomic DNA Translation: SQF46125.1
UGZK01000001 Genomic DNA Translation: SUJ48169.1
UHBY01000003 Genomic DNA Translation: SUL36137.1

NCBI Reference Sequences

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RefSeqi
WP_001001228.1, NZ_UHCQ01000002.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

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EnsemblBacteriai
CFG04134; CFG04134; ERS093009_01450
CXF00248; CXF00248; ERS074020_02620
CXM08723; CXM08723; ERS072738_01452
CZQ31670; CZQ31670; ERS1058648_02493
OAP79717; OAP79717; A4U86_11915
SCR57220; SCR57220; SAMEA2298760_02133

KEGG: Kyoto Encyclopedia of Genes and Genomes

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KEGGi
saur:SABB_01793

Pathosystems Resource Integration Center (PATRIC)

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PATRICi
fig|1280.3352.peg.1681

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP018629 Genomic DNA Translation: AUS74394.1
CP026962 Genomic DNA Translation: AVG64313.1
Y18635 Genomic DNA Translation: CAB60736.1
LALJ01000004 Genomic DNA Translation: KMR37935.1
LALQ01000038 Genomic DNA Translation: KMR56739.1
UAUZ01000013 Genomic DNA Translation: SQA20031.1
LS483309 Genomic DNA Translation: SQE61604.1
LS483350 Genomic DNA Translation: SQF46125.1
UGZK01000001 Genomic DNA Translation: SUJ48169.1
UHBY01000003 Genomic DNA Translation: SUL36137.1
RefSeqiWP_001001228.1, NZ_UHCQ01000002.1

3D structure databases

Select the link destinations:

Protein Data Bank Europe

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PDBei

Protein Data Bank RCSB

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RCSB PDBi

Protein Data Bank Japan

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PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2JG6X-ray1.70A1-186[»]

Database of comparative protein structure models

More...
ModBasei
Search...

MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
Search...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCFG04134; CFG04134; ERS093009_01450
CXF00248; CXF00248; ERS074020_02620
CXM08723; CXM08723; ERS072738_01452
CZQ31670; CZQ31670; ERS1058648_02493
OAP79717; OAP79717; A4U86_11915
SCR57220; SCR57220; SAMEA2298760_02133
KEGGisaur:SABB_01793
PATRICifig|1280.3352.peg.1681

Phylogenomic databases

eggNOGiENOG4108R3E Bacteria
COG2818 LUCA
KOiK01246

Family and domain databases

InterProiView protein in InterPro
IPR005019 Adenine_glyco
IPR011257 DNA_glycosylase
PfamiView protein in Pfam
PF03352 Adenine_glyco, 1 hit
SUPFAMiSSF48150 SSF48150, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiQ9RL93_STAAU
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q9RL93
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: December 5, 2018
This is version 96 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported
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