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Protein
Submitted name:

Putative TetR-family regulator

Gene

SCO0857

Organism
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi52 – 71H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative TetR-family regulatorImported
Gene namesi
Ordered Locus Names:SCO0857Imported
OrganismiStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)Imported
Taxonomic identifieri100226 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomycesStreptomyces albidoflavus group
Proteomesi
  • UP000001973 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Proteomic databases

PRIDEiQ9RCV4

Interactioni

Protein-protein interaction databases

STRINGi100226.SCO0857

Structurei

3D structure databases

ProteinModelPortaliQ9RCV4
SMRiQ9RCV4
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9RCV4

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini29 – 89HTH tetR-typeInterPro annotationAdd BLAST61

Phylogenomic databases

HOGENOMiHOG000021524
InParanoidiQ9RCV4
OMAiGDHARER
OrthoDBiPOG091H02BD
PhylomeDBiQ9RCV4

Family and domain databases

InterProiView protein in InterPro
IPR009057 Homeobox-like_sf
IPR001647 HTH_TetR
IPR036271 Tet_transcr_reg_TetR-rel_C_sf
PfamiView protein in Pfam
PF00440 TetR_N, 1 hit
PRINTSiPR00455 HTHTETR
SUPFAMiSSF46689 SSF46689, 1 hit
SSF48498 SSF48498, 1 hit
PROSITEiView protein in PROSITE
PS50977 HTH_TETR_2, 1 hit

Sequencei

Sequence statusi: Complete.

Q9RCV4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MTGQAAGPAA GPAAGQATKH AGGRRPGETR TREAILTAAR VCFAERGFDA
60 70 80 90 100
TSLRRIAETA GVDQSLVHHF YGTKENLFLQ ALELPGKIEE AITAAAQGGL
110 120 130 140 150
DGIGERVVRA HLSVWDDVSS RPALMTMVRS AAIHRAAAAR LRETATGILA
160 170 180 190 200
RALGGVITGE DAMLRTSMVA TQLVGLAMMR YVAHLEPLAS ADTDTVARHY
210
GRAVQAIVTD RD
Length:212
Mass (Da):22,322
Last modified:May 1, 2000 - v1
Checksum:iA1ACEBCBAA4AAD80
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939107 Genomic DNA Translation: CAB65638.1
RefSeqiNP_625157.1, NC_003888.3
WP_011027396.1, NC_003888.3

Genome annotation databases

EnsemblBacteriaiCAB65638; CAB65638; CAB65638
GeneIDi1096280
KEGGisco:SCO0857
PATRICifig|100226.15.peg.849

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939107 Genomic DNA Translation: CAB65638.1
RefSeqiNP_625157.1, NC_003888.3
WP_011027396.1, NC_003888.3

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2NP3X-ray2.35A/B1-212[»]
ProteinModelPortaliQ9RCV4
SMRiQ9RCV4
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi100226.SCO0857

Proteomic databases

PRIDEiQ9RCV4

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB65638; CAB65638; CAB65638
GeneIDi1096280
KEGGisco:SCO0857
PATRICifig|100226.15.peg.849

Phylogenomic databases

HOGENOMiHOG000021524
InParanoidiQ9RCV4
OMAiGDHARER
OrthoDBiPOG091H02BD
PhylomeDBiQ9RCV4

Miscellaneous databases

EvolutionaryTraceiQ9RCV4

Family and domain databases

InterProiView protein in InterPro
IPR009057 Homeobox-like_sf
IPR001647 HTH_TetR
IPR036271 Tet_transcr_reg_TetR-rel_C_sf
PfamiView protein in Pfam
PF00440 TetR_N, 1 hit
PRINTSiPR00455 HTHTETR
SUPFAMiSSF46689 SSF46689, 1 hit
SSF48498 SSF48498, 1 hit
PROSITEiView protein in PROSITE
PS50977 HTH_TETR_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiQ9RCV4_STRCO
AccessioniPrimary (citable) accession number: Q9RCV4
Entry historyiIntegrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: October 10, 2018
This is version 119 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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