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Entry version 88 (07 Oct 2020)
Sequence version 1 (01 May 2000)
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Protein
Submitted name:

Lipase

Gene
N/A
Organism
Pseudomonas sp. MIS38
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section indicates at which position the protein binds a given metal ion. The nature of the metal is indicated in the 'Description' field.<p><a href='/help/metal' target='_top'>More...</a></p>Metal bindingi118Calcium 1; via carbonyl oxygenCombined sources1
Metal bindingi120Calcium 1Combined sources1
Metal bindingi128ZincCombined sources1
Metal bindingi132Zinc; via pros nitrogenCombined sources1
Metal bindingi144Calcium 1; via carbonyl oxygenCombined sources1
Metal bindingi153Calcium 1Combined sources1
Metal bindingi157Calcium 1Combined sources1
Metal bindingi253Calcium 2Combined sources1
Metal bindingi253Calcium 3Combined sources1
Metal bindingi275Calcium 2Combined sources1
Metal bindingi275Calcium 3Combined sources1
Metal bindingi278Calcium 4; via carbonyl oxygenCombined sources1
Metal bindingi281Calcium 4; via carbonyl oxygenCombined sources1
Metal bindingi283Calcium 2; via carbonyl oxygenCombined sources1
Metal bindingi283Calcium 3; via carbonyl oxygenCombined sources1
Metal bindingi283Calcium 4Combined sources1
Metal bindingi284Calcium 2Combined sources1
Metal bindingi284Calcium 3Combined sources1
Metal bindingi337Calcium 4Combined sources1
Metal bindingi374Calcium 5; via carbonyl oxygenCombined sources1
Metal bindingi376Calcium 5; via carbonyl oxygenCombined sources1
Metal bindingi378Calcium 5Combined sources1
Metal bindingi383Calcium 6; via carbonyl oxygenCombined sources1
Metal bindingi385Calcium 6; via carbonyl oxygenCombined sources1
Metal bindingi387Calcium 6Combined sources1
Metal bindingi391Calcium 5; via carbonyl oxygenCombined sources1
Metal bindingi392Calcium 7; via carbonyl oxygenCombined sources1
Metal bindingi393Calcium 5; via carbonyl oxygenCombined sources1
Metal bindingi394Calcium 7; via carbonyl oxygenCombined sources1
Metal bindingi396Calcium 5Combined sources1
Metal bindingi396Calcium 7Combined sources1
Metal bindingi400Calcium 6Combined sources1
Metal bindingi402Calcium 6; via carbonyl oxygenCombined sources1
Metal bindingi405Calcium 6Combined sources1
Metal bindingi409Calcium 7; via carbonyl oxygenCombined sources1
Metal bindingi411Calcium 7; via carbonyl oxygenCombined sources1
Metal bindingi414Calcium 7Combined sources1
Metal bindingi494Calcium 8; via carbonyl oxygenCombined sources1
Metal bindingi496Calcium 8; via carbonyl oxygenCombined sources1
Metal bindingi498Calcium 8Combined sources1
Metal bindingi503Calcium 9; via carbonyl oxygenCombined sources1
Metal bindingi511Calcium 8; via carbonyl oxygenCombined sources1
Metal bindingi512Calcium 10; via carbonyl oxygenCombined sources1
Metal bindingi512Calcium 11; via carbonyl oxygenCombined sources1
Metal bindingi512Calcium 12; via carbonyl oxygenCombined sources1
Metal bindingi513Calcium 8; via carbonyl oxygenCombined sources1
Metal bindingi514Calcium 10; via carbonyl oxygenCombined sources1
Metal bindingi514Calcium 11; via carbonyl oxygenCombined sources1
Metal bindingi514Calcium 12; via carbonyl oxygenCombined sources1
Metal bindingi514Calcium 13; via carbonyl oxygenCombined sources1
Metal bindingi516Calcium 10Combined sources1
Metal bindingi516Calcium 11Combined sources1
Metal bindingi516Calcium 12Combined sources1
Metal bindingi516Calcium 13Combined sources1
Metal bindingi516Calcium 8Combined sources1
Metal bindingi517Zinc; via tele nitrogenCombined sources1
Metal bindingi521Calcium 14; via carbonyl oxygenCombined sources1
Metal bindingi523Calcium 14; via carbonyl oxygenCombined sources1
Metal bindingi523Calcium 9; via amide nitrogenCombined sources1
Metal bindingi525Calcium 14Combined sources1
Metal bindingi525Calcium 9Combined sources1
Metal bindingi529Calcium 10; via carbonyl oxygenCombined sources1
Metal bindingi529Calcium 11; via carbonyl oxygenCombined sources1
Metal bindingi529Calcium 13; via carbonyl oxygenCombined sources1
Metal bindingi530Calcium 15; via carbonyl oxygenCombined sources1
Metal bindingi531Calcium 10; via carbonyl oxygenCombined sources1
Metal bindingi531Calcium 12; via carbonyl oxygenCombined sources1
Metal bindingi531Calcium 13; via carbonyl oxygenCombined sources1
Metal bindingi532Calcium 15; via carbonyl oxygenCombined sources1
Metal bindingi534Calcium 11Combined sources1
Metal bindingi534Calcium 12Combined sources1
Metal bindingi534Calcium 13Combined sources1
Metal bindingi534Calcium 15Combined sources1
Metal bindingi537ZincCombined sources1
Metal bindingi538Calcium 14; via carbonyl oxygenCombined sources1
Metal bindingi540Calcium 14; via carbonyl oxygenCombined sources1
Metal bindingi541Calcium 16; via carbonyl oxygenCombined sources1
Metal bindingi543Calcium 14Combined sources1
Metal bindingi551Calcium 15; via carbonyl oxygenCombined sources1
Metal bindingi554Calcium 15Combined sources1
Metal bindingi560Calcium 16Combined sources1
Metal bindingi562Calcium 16Combined sources1
Metal bindingi563Calcium 16Combined sources1

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

LigandCalciumCombined sourcesARBA annotation, Metal-bindingCombined sources, ZincCombined sources

Enzyme and pathway databases

BRENDA Comprehensive Enzyme Information System

More...
BRENDAi
3.1.1.3, 5085

Protein family/group databases

ESTHER database of the Alpha/Beta-hydrolase fold superfamily of proteins

More...
ESTHERi
psesp-Q9RBY1, Bacterial_lip_FamI.3

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
LipaseImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiPseudomonas sp. MIS38Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri91465 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q9RBY1

Database of comparative protein structure models

More...
ModBasei
Search...

Protein Data Bank in Europe - Knowledge Base

More...
PDBe-KBi
Search...

Miscellaneous databases

Relative evolutionary importance of amino acids within a protein sequence

More...
EvolutionaryTracei
Q9RBY1

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
2.150.10.10, 2 hits
3.40.50.1820, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR029058, AB_hydrolase
IPR018511, Hemolysin-typ_Ca-bd_CS
IPR001343, Hemolysn_Ca-bd
IPR011049, Serralysin-like_metalloprot_C

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00353, HemolysinCabind, 2 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF51120, SSF51120, 2 hits
SSF53474, SSF53474, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS00330, HEMOLYSIN_CALCIUM, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q9RBY1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGVYDYKNFG TADSKALFSD AMAITLYSYH NLDNGFAAGY QHNGFGLGLP
60 70 80 90 100
ATLVTALLGG TDSQGVIPGI PWNPDSEKLA LDAVKKAGWT PITASQLGYD
110 120 130 140 150
GKTDARGTFF GEKAGYTTAQ VEILGKYDAQ GHLTEIGIAF RGTSGPRENL
160 170 180 190 200
ILDSIGDVIN DLLAAFGPKD YAKNYVGEAF GNLLNDVVAF AKANGLSGKD
210 220 230 240 250
VLVSGHSLGG LAVNSMADLS GGKWGGFFAD SNYIAYASPT QSSTDKVLNV
260 270 280 290 300
GYENDPVFRA LDGSTFTGAS VGVHDAPKES ATDNIVSFND HYASTAWNLL
310 320 330 340 350
PFSILNIPTW ISHLPTAYGD GMNRIIESKF YDLTSKDSTI IVANLSDPAR
360 370 380 390 400
ANTWVQDLNR NAETHKGSTF IIGSDSNDLI QGGSGNDYLE GRAGNDTFRD
410 420 430 440 450
GGGYNVILGG AGNNTLDLQK SVNTFDFAND GAGNLYVRDA NGGISITRDI
460 470 480 490 500
GSIVTKEPGF LWGLFKDDVT HSVTASGLKV GSNVTQYDAS VKGTNGADTL
510 520 530 540 550
KAHAGGDWLF GLDGNDHLIG GVGNDVFVGG AGNDLMESGG GADTFLFNGA
560 570 580 590 600
FGQDRVVGFT SNDKLVFLGV QGVLPNDDFR AHASMVGQDT VLKFGGDSVT
610
LVGVALNSLS ADGIVIA
Length:617
Mass (Da):64,513
Last modified:May 1, 2000 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iF604E702CE329374
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AB025596 Genomic DNA Translation: BAA84997.1

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB025596 Genomic DNA Translation: BAA84997.1

3D structure databases

Select the link destinations:

Protein Data Bank Europe

More...
PDBei

Protein Data Bank RCSB

More...
RCSB PDBi

Protein Data Bank Japan

More...
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2Z8XX-ray1.48A1-617[»]
2Z8ZX-ray1.80A1-617[»]
2ZJ6X-ray2.25A1-617[»]
2ZJ7X-ray2.21A1-617[»]
2ZVDX-ray2.15A/C1-617[»]
3A6ZX-ray2.15A/C1-617[»]
3A70X-ray2.15A/C1-617[»]
SMRiQ9RBY1
ModBaseiSearch...
PDBe-KBiSearch...

Protein family/group databases

ESTHERipsesp-Q9RBY1, Bacterial_lip_FamI.3

Enzyme and pathway databases

BRENDAi3.1.1.3, 5085

Miscellaneous databases

EvolutionaryTraceiQ9RBY1

Family and domain databases

Gene3Di2.150.10.10, 2 hits
3.40.50.1820, 1 hit
InterProiView protein in InterPro
IPR029058, AB_hydrolase
IPR018511, Hemolysin-typ_Ca-bd_CS
IPR001343, Hemolysn_Ca-bd
IPR011049, Serralysin-like_metalloprot_C
PfamiView protein in Pfam
PF00353, HemolysinCabind, 2 hits
SUPFAMiSSF51120, SSF51120, 2 hits
SSF53474, SSF53474, 1 hit
PROSITEiView protein in PROSITE
PS00330, HEMOLYSIN_CALCIUM, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiQ9RBY1_9PSED
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q9RBY1
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: May 1, 2000
Last modified: October 7, 2020
This is version 88 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources
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