Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Entry version 109 (16 Oct 2019)
Sequence version 3 (09 Jan 2007)
Previous versions | rss
Help videoAdd a publicationFeedback
Protein

Pecanex-like protein 1

Gene

Pcnx1

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score:

Annotation score:3 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Pecanex-like protein 1
Alternative name(s):
Pecanex homolog protein 1By similarity
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Pcnx1By similarity
Synonyms:Kiaa0805, Pcnx, Pcnxl1
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 12

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...
MGIi
MGI:1891924 Pcnx

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular_location_section">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei33 – 53HelicalSequence analysisAdd BLAST21
Transmembranei57 – 77HelicalSequence analysisAdd BLAST21
Transmembranei1010 – 1030HelicalSequence analysisAdd BLAST21
Transmembranei1035 – 1055HelicalSequence analysisAdd BLAST21
Transmembranei1069 – 1089HelicalSequence analysisAdd BLAST21
Transmembranei1119 – 1139HelicalSequence analysisAdd BLAST21
Transmembranei1163 – 1183HelicalSequence analysisAdd BLAST21
Transmembranei1196 – 1216HelicalSequence analysisAdd BLAST21
Transmembranei1269 – 1289HelicalSequence analysisAdd BLAST21
Transmembranei1297 – 1317HelicalSequence analysisAdd BLAST21

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Membrane

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00002157941 – 2344Pecanex-like protein 1Add BLAST2344

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/ptm_processing_section">PTM / Processing</a> section specifies the position and type of each covalently attached glycan group (mono-, di-, or polysaccharide).<p><a href='/help/carbohyd' target='_top'>More...</a></p>Glycosylationi1094N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi1158N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi1582N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi1723N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi1985N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi2075N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi2231N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi2237N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi2263N-linked (GlcNAc...) asparagineSequence analysis1

Keywords - PTMi

Glycoprotein

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q9QYC1

PeptideAtlas

More...
PeptideAtlasi
Q9QYC1

PRoteomics IDEntifications database

More...
PRIDEi
Q9QYC1

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q9QYC1

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
Q9QYC1

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSMUSG00000021140 Expressed in 269 organ(s), highest expression level in choroid plexus epithelium

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q9QYC1 baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q9QYC1 MM

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
10090.ENSMUSP00000021567

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi320 – 417Ser-richAdd BLAST98
Compositional biasi573 – 638Ser-richAdd BLAST66
Compositional biasi2106 – 2202Ser-richAdd BLAST97

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the pecanex family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG3604 Eukaryota
ENOG410XPRI LUCA

Ensembl GeneTree

More...
GeneTreei
ENSGT00940000157417

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000007773

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q9QYC1

Database of Orthologous Groups

More...
OrthoDBi
63639at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q9QYC1

TreeFam database of animal gene trees

More...
TreeFami
TF313570

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR039797 Pecanex
IPR007735 Pecanex_C

The PANTHER Classification System

More...
PANTHERi
PTHR12372 PTHR12372, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF05041 Pecanex_C, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (2+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 2 <p>This subsection of the ‘Sequence’ section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 2 described isoforms and 4 potential isoforms that are computationally mapped.Show allAlign All

Isoform 1 (identifier: Q9QYC1-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MGSQTLQILR QGVWAALSGG WYYDPHQATF VNALHLYLWL FLLGLPFTLY
60 70 80 90 100
MALPSSMIIV AVYCPVVAAV FIILKMVNYR LHRALDAGEI VDRSAKEFTD
110 120 130 140 150
QRAKAEQGNC STRRKDSNGP SDPGGGIEMS EFIREATPPV GCSSRNSYAG
160 170 180 190 200
LDPSNQIGSG SSRLGTAATI KGDTDTAKTS DDISLSLGQS SSLCKEGSEE
210 220 230 240 250
QDLATDRKLF RLVSNDSFIS IQPSLSSCGQ DLPRDFSDKV SLPSHSQHHR
260 270 280 290 300
VDQSLCSACD TEVASLVPLH SHSYRKEHRP RGVPRTSSSA VAFPDASLSG
310 320 330 340 350
LPLYQQQQRR GLDPVTELDS SKPHSGTRES SAGKSCPPAQ SQPAADRRKS
360 370 380 390 400
SSQPPTKCGK SRALNAEKSV DSLRSLSTRS SGSTESYCSG TDRDTNSTLS
410 420 430 440 450
SYKSEQTSST HIESILSEHE ESPKVGDKSA RKRECGADSV EERSHRADDR
460 470 480 490 500
RTSSDKTAPE GNTPAGPPEA PDAQASEEMA DQAAPSSSAS EDANKNPHAN
510 520 530 540 550
EFTVPGDRPP EQSAESKEEQ SEKPSLATDS RVCKDDGGKQ KEGDVRPKSS
560 570 580 590 600
SLIHRTTSAH KPGRRRTGKK RASSFDSSRH RDYVSFRGVS GTKPHSAVFG
610 620 630 640 650
HDEDSSDQSD LSRAPSIHSA HQFSSDSSSS ATSHSCQSPE GKYGALKTKH
660 670 680 690 700
GHRDRGTDSD HTHRAHPGPE GTTKKRASRR TSSTSSAKTR ARVLSLDSGT
710 720 730 740 750
VACLNDSNRL LAPDSMKPLT TSKSDLEAKE GEVLDELSLL GRASQLETVT
760 770 780 790 800
RSRNSLPSQV AFPEGEEQDA ATGAAQASEE AVAFRRERST FRRQAVRRRH
810 820 830 840 850
NAGSNPTPPT LLIGSPLSLQ DGQQGQQSTA QVKVQSRPPS QAAVLSASAS
860 870 880 890 900
LLVRKGSVHL EASHDHASAV GGSSLHDELG KFSSTLYETG GCDMSLVNFE
910 920 930 940 950
PAARRASNIC DTDSHVSSST SVRFYPHDML SLPQIRLNRL LTIDTDLLEQ
960 970 980 990 1000
QDIDLSPDLA ATYGPTEEAA QKVKHYYRFW VLPQLWIGIN FDRLTLLALF
1010 1020 1030 1040 1050
DRNREILENI LAVVLAILVA FLGSILLIQG FFRDIWVFQF CLVIASCQYS
1060 1070 1080 1090 1100
LLKSVQPDSS SPRHGHNRII AYSRPVYFCL CCGLIWLLDY GSRNLTTSKF
1110 1120 1130 1140 1150
KLYGVTFTNP LVLLSARDLV IVFTLCFPIV FFIGLLPQVN TFVMYLCEQL
1160 1170 1180 1190 1200
DIHIFGGNAT TSLLAALYSF LCSIVAVALL YGLCYGALRD SWDGQHVPVL
1210 1220 1230 1240 1250
FSVFCGLLVA VSYHLSRQSS DPSVLFSLMQ SKIFPKADEK NPEDPLSEVK
1260 1270 1280 1290 1300
DPLPEKLSNS VSERLQSDLV VCVIIGVLYF AIHVSTVFTA LQPALKYVLY
1310 1320 1330 1340 1350
ALVGVVGLVT HYVLPQVRKQ LPWHCFSRPL LRTAEHSQYE VRNAATMMWF
1360 1370 1380 1390 1400
EKLHVWLLFV EKNIIYPLIV LNELSSSAET IASPKKLDTE LGALMITIAG
1410 1420 1430 1440 1450
LKLLRSSFSS PTYQYITVIF TVLFFKFDYE AFSETMLLDL FFMSILFSKL
1460 1470 1480 1490 1500
WELLYKLQFV YTYVAPWQIT WGSAFHAFAQ PFAVPHSAML FVQAIVSAFF
1510 1520 1530 1540 1550
STPLNPFLGS AIFITSYVRP VKFWERDYNT KRVDHSNTRL ASQLDRNPGS
1560 1570 1580 1590 1600
DDNNLNSIFY EHLTRSLQHS LCGDLLLGRW GNYSTGDCFI LASDYLNALV
1610 1620 1630 1640 1650
HLIEIGNGLV TFQLRGLEFR GTYCQQREVE AITEGVEEDE GFCCCEPGHV
1660 1670 1680 1690 1700
PHVLSFNAAF GQRWLAWEVV VTKYILEGYS ITDNSAASML QVFDLRRVLT
1710 1720 1730 1740 1750
TYYVKGIIYY VTTSSKLEEW LANETMQEGL RLCADRNYVD VDPTFNPNID
1760 1770 1780 1790 1800
EDYDHRLAGI SRESFCVIYL SWIEYCSSRR AKPLDVDKDS SLVTLCYGLC
1810 1820 1830 1840 1850
VLGRRALGTA SHHMSSNLES FLYGLHALFK GDFRISSVRD EWIFADMELL
1860 1870 1880 1890 1900
RKVVVPGIRM SIKLHQDHFT SPDEYDDPTV LYEAIVSHEK NLVIAHEGDP
1910 1920 1930 1940 1950
AWRSAVLANS PSLLALRHVM DDGTNEYKII MLNRRYLSFR VIKVNKECVR
1960 1970 1980 1990 2000
GLWAGQQQEL VFLRNRNPER GSIQNAKQAL RNMINSSCDQ PIGYPIFVSP
2010 2020 2030 2040 2050
LTTSYSDSHD QLKEILGGPI SLGNIRNFIV STWHRLRKGC GAGCNSGGNI
2060 2070 2080 2090 2100
EDSDTGGGTS CPGNSAVTAS DPHNNVSQGS TGHPGQGAGS GLHPPTTSYP
2110 2120 2130 2140 2150
PTLGTSHSAH SVQSSLVRQS PARASMASQS SYCYSSRHSS LRMSTTGFVP
2160 2170 2180 2190 2200
CRRSSTSQIS LRNLPSSIQS RLSMVNQMEA ASQGGMGCVQ HGLPSSSSSS
2210 2220 2230 2240 2250
QSIPACKHHT LVAFLGAEGG QGSATEAQPG NTSSPANISH ARKGEVIYRV
2260 2270 2280 2290 2300
QIVDLSQILE GINVSKRKEL HWPDEGIRLK AGRNSWKDWS PQEGMEGHVV
2310 2320 2330 2340
HRWVPCSRDP STRSHIDKTV LLVQIDDKYV TIIETGVLEL GAEV
Length:2,344
Mass (Da):258,147
Last modified:January 9, 2007 - v3
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iFF3E3C60D57488CB
GO
Isoform 2 (identifier: Q9QYC1-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     854-945: Missing.

Note: No experimental confirmation available.
Show »
Length:2,252
Mass (Da):248,162
Checksum:i970A28422B905E70
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 4 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A1Y7VKR5A0A1Y7VKR5_MOUSE
Pecanex homolog
Pcnx
2,338Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A1Y7VJ77A0A1Y7VJ77_MOUSE
Pecanex homolog
Pcnx
818Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A1Y7VLV8A0A1Y7VLV8_MOUSE
Pecanex homolog
Pcnx
1,473Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A1Y7VLG1A0A1Y7VLG1_MOUSE
Pecanex homolog
Pcnx
75Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

<p>This subsection of the ‘Sequence’ section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence AAF21809 differs from that shown. Reason: Erroneous initiation.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti930 – 934Missing in AAF21809 (Ref. 3) Curated5
Sequence conflicti1220S → N in AAF21809 (Ref. 3) Curated1
Sequence conflicti1457L → R in AAF21809 (Ref. 3) Curated1
Sequence conflicti1806A → T in BAB29314 (PubMed:16141072).Curated1
Sequence conflicti1874E → K in BAB29314 (PubMed:16141072).Curated1
Sequence conflicti1899D → Y in BAB29314 (PubMed:16141072).Curated1
Sequence conflicti2318K → N in AAF21809 (Ref. 3) Curated1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_022167854 – 945Missing in isoform 2. 1 PublicationAdd BLAST92

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AC124484 Genomic DNA No translation available.
AC124595 Genomic DNA No translation available.
AK129221 mRNA Translation: BAC98031.3
AF096286 mRNA Translation: AAF21809.1 Different initiation.
AK014387 mRNA Translation: BAB29314.1

The Consensus CDS (CCDS) project

More...
CCDSi
CCDS26025.1 [Q9QYC1-1]

NCBI Reference Sequences

More...
RefSeqi
NP_061284.2, NM_018814.3 [Q9QYC1-1]

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSMUST00000021567; ENSMUSP00000021567; ENSMUSG00000021140 [Q9QYC1-1]

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
54604

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
mmu:54604

UCSC genome browser

More...
UCSCi
uc007ocq.1 mouse [Q9QYC1-1]

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC124484 Genomic DNA No translation available.
AC124595 Genomic DNA No translation available.
AK129221 mRNA Translation: BAC98031.3
AF096286 mRNA Translation: AAF21809.1 Different initiation.
AK014387 mRNA Translation: BAB29314.1
CCDSiCCDS26025.1 [Q9QYC1-1]
RefSeqiNP_061284.2, NM_018814.3 [Q9QYC1-1]

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000021567

PTM databases

iPTMnetiQ9QYC1
PhosphoSitePlusiQ9QYC1

Proteomic databases

PaxDbiQ9QYC1
PeptideAtlasiQ9QYC1
PRIDEiQ9QYC1

Genome annotation databases

EnsembliENSMUST00000021567; ENSMUSP00000021567; ENSMUSG00000021140 [Q9QYC1-1]
GeneIDi54604
KEGGimmu:54604
UCSCiuc007ocq.1 mouse [Q9QYC1-1]

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
54604
MGIiMGI:1891924 Pcnx

Rodent Unidentified Gene-Encoded large proteins database

More...
Rougei
Search...

Phylogenomic databases

eggNOGiKOG3604 Eukaryota
ENOG410XPRI LUCA
GeneTreeiENSGT00940000157417
HOGENOMiHOG000007773
InParanoidiQ9QYC1
OrthoDBi63639at2759
PhylomeDBiQ9QYC1
TreeFamiTF313570

Miscellaneous databases

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

More...
ChiTaRSi
Pcnx mouse

Protein Ontology

More...
PROi
PR:Q9QYC1

The Stanford Online Universal Resource for Clones and ESTs

More...
SOURCEi
Search...

Gene expression databases

BgeeiENSMUSG00000021140 Expressed in 269 organ(s), highest expression level in choroid plexus epithelium
ExpressionAtlasiQ9QYC1 baseline and differential
GenevisibleiQ9QYC1 MM

Family and domain databases

InterProiView protein in InterPro
IPR039797 Pecanex
IPR007735 Pecanex_C
PANTHERiPTHR12372 PTHR12372, 1 hit
PfamiView protein in Pfam
PF05041 Pecanex_C, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiPCX1_MOUSE
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q9QYC1
Secondary accession number(s): Q6ZQ41, Q9CUU7
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 3, 2003
Last sequence update: January 9, 2007
Last modified: October 16, 2019
This is version 109 of the entry and version 3 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again