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Entry version 106 (29 Sep 2021)
Sequence version 1 (01 May 2000)
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Protein

Triadin

Gene

Trdn

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Contributes to the regulation of lumenal Ca2+ release via the sarcoplasmic reticulum calcium release channels RYR1 and RYR2, a key step in triggering skeletal and heart muscle contraction. Required for normal organization of the triad junction, where T-tubules and the sarcoplasmic reticulum terminal cisternae are in close contact. Required for normal skeletal muscle strength. Plays a role in excitation-contraction coupling in the heart and in regulating the rate of heart beats.

By similarity

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

Reactome - a knowledgebase of biological pathways and processes

More...
Reactomei
R-RNO-2672351, Stimuli-sensing channels
R-RNO-5578775, Ion homeostasis

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Triadin
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:TrdnImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiRattus norvegicus (Rat)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10116 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000002494 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 1
  • UP000234681 Componentsi: Chromosome 1, Unassembled WGS sequence

Organism-specific databases

Rat genome database

More...
RGDi
619856, Trdn

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular_location_section">'Subcellular location'</a> section describes the subcellular compartment where each non-membrane region of a membrane-spanning protein is found.<p><a href='/help/topo_dom' target='_top'>More...</a></p>Topological domaini1 – 47CytoplasmicSequence analysisAdd BLAST47
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular_location_section">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei48 – 68HelicalSequence analysisAdd BLAST21
Topological domaini69 – 687LumenalSequence analysisAdd BLAST619

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Cell membrane, Endoplasmic reticulum, Membrane, Microsome, Sarcoplasmic reticulum

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00004305631 – 687TriadinAdd BLAST687

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the PTM / Processing":/help/ptm_processing_section section describes the positions of cysteine residues participating in disulfide bonds.<p><a href='/help/disulfid' target='_top'>More...</a></p>Disulfide bondi270InterchainBy similarity
<p>This subsection of the 'PTM / Processing' section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei303PhosphoserineCombined sources1
Modified residuei306PhosphoserineCombined sources1
<p>This subsection of the <a href="http://www.uniprot.org/help/ptm_processing_section">PTM / Processing</a> section specifies the position and type of each covalently attached glycan group (mono-, di-, or polysaccharide).<p><a href='/help/carbohyd' target='_top'>More...</a></p>Glycosylationi514N-linked (GlcNAc...) asparagineSequence analysis1
Disulfide bondi649InterchainBy similarity

<p>This subsection of the <a href="http://www.uniprot.org/help/ptm_processing_section">PTM/processing</a> section describes post-translational modifications (PTMs). This subsection <strong>complements</strong> the information provided at the sequence level or describes modifications for which <strong>position-specific data is not yet available</strong>.<p><a href='/help/post-translational_modification' target='_top'>More...</a></p>Post-translational modificationi

Phosphorylated by CaMK2.By similarity
N-glycosylated.1 Publication

Keywords - PTMi

Disulfide bond, Glycoprotein, Phosphoprotein

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q9QX75

PRoteomics IDEntifications database

More...
PRIDEi
Q9QX75

PTM databases

GlyGen: Computational and Informatics Resources for Glycoscience

More...
GlyGeni
Q9QX75, 1 site

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q9QX75

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
Q9QX75

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the 'Expression' section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified 'at protein level'.<br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Detected in skeletal muscle (at protein level). Detected in skeletal muscle.2 Publications

Gene expression databases

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q9QX75, baseline and differential

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Homooligomer of variable subunit number; disulfide-linked.

Interacts with CASQ1 in skeletal muscle.

Interacts with CASQ2 (By similarity).

Interacts with RYR1 in skeletal muscle.

By similarity1 Publication

GO - Molecular functioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
10116.ENSRNOP00000041570

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni117 – 265DisorderedSequence analysisAdd BLAST149
Regioni280 – 643DisorderedSequence analysisAdd BLAST364
Regioni660 – 687DisorderedSequence analysisAdd BLAST28

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular type of amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi117 – 132Acidic residuesSequence analysisAdd BLAST16
Compositional biasi133 – 265Basic and acidic residuesSequence analysisAdd BLAST133
Compositional biasi305 – 356Basic and acidic residuesSequence analysisAdd BLAST52
Compositional biasi369 – 506Basic and acidic residuesSequence analysisAdd BLAST138
Compositional biasi523 – 584Basic and acidic residuesSequence analysisAdd BLAST62
Compositional biasi591 – 634Basic and acidic residuesSequence analysisAdd BLAST44
Compositional biasi666 – 687Polar residuesSequence analysisAdd BLAST22

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG502S0X4, Eukaryota

Ensembl GeneTree

More...
GeneTreei
ENSGT00510000049207

Database of Orthologous Groups

More...
OrthoDBi
1200049at2759

TreeFam database of animal gene trees

More...
TreeFami
TF350396

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR007943, Asp-B-hydro/Triadin_dom
IPR010798, Triadin

The PANTHER Classification System

More...
PANTHERi
PTHR14106, PTHR14106, 3 hits

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF05279, Asp-B-Hydro_N, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (4+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 4 <p>This subsection of the 'Sequence' section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 4 described isoforms and 3 potential isoforms that are computationally mapped.Show allAlign All

Isoform 1 (identifier: Q9QX75-1) [UniParc]FASTAAdd to basket
Also known as: Triadin 95kDa, Trisk 951 Publication

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MTEITAEGNA SITTTVIDNK NGSVPKSPGK VLKRTVTEDI VTTFSSPAAW
60 70 80 90 100
LLVIALIITW SAVAIVMFDL VDYKNFSASS IAKIGSDPLK LVNDAVEETT
110 120 130 140 150
DWIYGFFSLL SDIISSDGDE DDEDADEDID KGEIEEPPLK RKEIQKEKAE
160 170 180 190 200
KQEKPEKKIQ TKVSHREKEK GKEKLKGEKP EKKATHKEKL EKKERTETKM
210 220 230 240 250
AAKEDKKIKT KEKTEEKAKK EMKVGKQEKA KPAAAKAKET PKTTPKAREK
260 270 280 290 300
DDKETPAVPK HEQKDQYAFC RYMIDMFVHG DLKPGQSPAV PPPSLTASRP
310 320 330 340 350
ALSTPSLEEK EKEEKKKVEK KVTSDTKKKE KGEAKKKSEK ETVIDGKGKE
360 370 380 390 400
PGKPPETKQT TTKLTTQAAA TKDEKKEDSK KMKKPPEEKP KGKKQEKKEK
410 420 430 440 450
HIEPAKTPKK EHPAPSEKHR KAKAEQAKEE IAPASTKKAL HGKKEEKAKT
460 470 480 490 500
VEQGKDVKPK LPQPQLKKEE KSEPQPKKEV KLETQLKKEE KSEPQVKKEA
510 520 530 540 550
KLASSEKGQT RKQNITRPEQ VIPHGKPEQK VPKQIKAITA EKTEKAERQE
560 570 580 590 600
KYHPSIKTEG KPEVTDSGKK KIEKPEKESK VPPKQENLQV RNVTRAEKRG
610 620 630 640 650
KISKDSKDAP APKKDKDSKD VLHSKKDKEV TNNVSSPKKQ KSPISFFQCV
660 670 680
YLDGYNGYGF QFPVTPVQHS GENPGKSNSP GQKQQEQ
Length:687
Mass (Da):77,200
Last modified:May 1, 2000 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i52C52CF9410DDCE7
GO
Isoform 2 (identifier: Q9QX75-2) [UniParc]FASTAAdd to basket
Also known as: Triadin 51 kDa, Trisk 511 Publication

The sequence of this isoform differs from the canonical sequence as follows:
     456-461: DVKPKL → KKSEAG
     462-687: Missing.

Show »
Length:461
Mass (Da):51,516
Checksum:i1B904332C4820C97
GO
Isoform 3 (identifier: Q9QX75-3) [UniParc]FASTAAdd to basket
Also known as: Triadin 32 kDa, Trisk 321 Publication

The sequence of this isoform differs from the canonical sequence as follows:
     265-287: DQYAFCRYMIDMFVHGDLKPGQS → GKLSKEEKEAVGGPKRILDKKQI
     288-687: Missing.

Show »
Length:287
Mass (Da):32,125
Checksum:iFEC5B81756F36486
GO
Isoform 4 (identifier: Q9QX75-4) [UniParc]FASTAAdd to basket
Also known as: Triadin 49 kDa, Trisk 491 Publication

The sequence of this isoform differs from the canonical sequence as follows:
     439-442: ALHG → GKHS
     443-687: Missing.

Show »
Length:442
Mass (Da):49,462
Checksum:i0A035BBCB56E631C
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 3 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
F1LY11F1LY11_RAT
Triadin
Trdn
688Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A0G2JU95A0A0G2JU95_RAT
Triadin
Trdn rCG_42123
687Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A1B0GWK5A0A1B0GWK5_RAT
Triadin
Trdn
267Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti95A → V in CAB64603 (PubMed:10713145).Curated1
Sequence conflicti95A → V in CAH23274 (PubMed:15927957).Curated1
Sequence conflicti95A → V in CAH23273 (PubMed:15927957).Curated1
Sequence conflicti95A → V in AAF29540 (Ref. 3) Curated1
Sequence conflicti143E → D in CAB64603 (PubMed:10713145).Curated1
Sequence conflicti143E → D in CAH23274 (PubMed:15927957).Curated1
Sequence conflicti143E → D in CAH23273 (PubMed:15927957).Curated1
Sequence conflicti143E → D in AAF29540 (Ref. 3) Curated1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_056802265 – 287DQYAF…KPGQS → GKLSKEEKEAVGGPKRILDK KQI in isoform 3. CuratedAdd BLAST23
Alternative sequenceiVSP_056803288 – 687Missing in isoform 3. CuratedAdd BLAST400
Alternative sequenceiVSP_056804439 – 442ALHG → GKHS in isoform 4. Curated4
Alternative sequenceiVSP_056805443 – 687Missing in isoform 4. CuratedAdd BLAST245
Alternative sequenceiVSP_056806456 – 461DVKPKL → KKSEAG in isoform 2. Curated6
Alternative sequenceiVSP_056807462 – 687Missing in isoform 2. CuratedAdd BLAST226

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AJ243303 mRNA Translation: CAB64603.1
AJ243304 mRNA Translation: CAB64604.1
AJ812275 mRNA Translation: CAH23273.1
AJ812276 mRNA Translation: CAH23274.1
AF220558 mRNA Translation: AAF29539.1
AF220559 mRNA Translation: AAF29540.1
AABR06001232 Genomic DNA No translation available.
AABR06001233 Genomic DNA No translation available.
AABR06001234 Genomic DNA No translation available.
AABR06001235 Genomic DNA No translation available.
AABR06001236 Genomic DNA No translation available.
AABR06001237 Genomic DNA No translation available.
AABR06001238 Genomic DNA No translation available.
AABR06001239 Genomic DNA No translation available.
AABR06001240 Genomic DNA No translation available.
AABR06001241 Genomic DNA No translation available.
AABR06001242 Genomic DNA No translation available.
AABR06001243 Genomic DNA No translation available.
CH474002 Genomic DNA Translation: EDL87717.1

NCBI Reference Sequences

More...
RefSeqi
NP_067698.1, NM_021666.2 [Q9QX75-1]

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSRNOT00000092757; ENSRNOP00000076056; ENSRNOG00000012609 [Q9QX75-3]

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
59299

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
rno:59299

UCSC genome browser

More...
UCSCi
RGD:619856, rat

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ243303 mRNA Translation: CAB64603.1
AJ243304 mRNA Translation: CAB64604.1
AJ812275 mRNA Translation: CAH23273.1
AJ812276 mRNA Translation: CAH23274.1
AF220558 mRNA Translation: AAF29539.1
AF220559 mRNA Translation: AAF29540.1
AABR06001232 Genomic DNA No translation available.
AABR06001233 Genomic DNA No translation available.
AABR06001234 Genomic DNA No translation available.
AABR06001235 Genomic DNA No translation available.
AABR06001236 Genomic DNA No translation available.
AABR06001237 Genomic DNA No translation available.
AABR06001238 Genomic DNA No translation available.
AABR06001239 Genomic DNA No translation available.
AABR06001240 Genomic DNA No translation available.
AABR06001241 Genomic DNA No translation available.
AABR06001242 Genomic DNA No translation available.
AABR06001243 Genomic DNA No translation available.
CH474002 Genomic DNA Translation: EDL87717.1
RefSeqiNP_067698.1, NM_021666.2 [Q9QX75-1]

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000041570

PTM databases

GlyGeniQ9QX75, 1 site
iPTMnetiQ9QX75
PhosphoSitePlusiQ9QX75

Proteomic databases

PaxDbiQ9QX75
PRIDEiQ9QX75

Genome annotation databases

EnsembliENSRNOT00000092757; ENSRNOP00000076056; ENSRNOG00000012609 [Q9QX75-3]
GeneIDi59299
KEGGirno:59299
UCSCiRGD:619856, rat

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
10345
RGDi619856, Trdn

Phylogenomic databases

eggNOGiENOG502S0X4, Eukaryota
GeneTreeiENSGT00510000049207
OrthoDBi1200049at2759
TreeFamiTF350396

Enzyme and pathway databases

ReactomeiR-RNO-2672351, Stimuli-sensing channels
R-RNO-5578775, Ion homeostasis

Miscellaneous databases

Protein Ontology

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PROi
PR:Q9QX75

Gene expression databases

ExpressionAtlasiQ9QX75, baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR007943, Asp-B-hydro/Triadin_dom
IPR010798, Triadin
PANTHERiPTHR14106, PTHR14106, 3 hits
PfamiView protein in Pfam
PF05279, Asp-B-Hydro_N, 1 hit

MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiTRDN_RAT
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q9QX75
Secondary accession number(s): E9PTN7
, Q5DVI6, Q5DVI7, Q9JKZ5, Q9JKZ6, Q9QX76
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 29, 2014
Last sequence update: May 1, 2000
Last modified: September 29, 2021
This is version 106 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome
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