Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Capsid protein

Gene

ORF1

Organism
Torque teno virus (isolate Human/Japan/TRM1/1999) (TTV) (Torque teno virus genotype 1a)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Self assemble to form an icosahedral capsid.By similarity

Names & Taxonomyi

Protein namesi
Recommended name:
Capsid protein
Gene namesi
ORF Names:ORF1
OrganismiTorque teno virus (isolate Human/Japan/TRM1/1999) (TTV) (Torque teno virus genotype 1a)
Taxonomic identifieri486275 [NCBI]
Taxonomic lineageiVirusesssDNA virusesAnelloviridaeunclassified Anelloviridae
Virus hostiHomo sapiens (Human) [TaxID: 9606]
Proteomesi
  • UP000008256 Componenti: Genome

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Capsid protein, T=1 icosahedral capsid protein, Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003153271 – 770Capsid proteinAdd BLAST770

Proteomic databases

PRIDEiQ9QUB8

Family & Domainsi

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi7 – 82Arg-richAdd BLAST76

Sequence similaritiesi

Phylogenomic databases

OrthoDBiVOG0900003O

Family and domain databases

InterProiView protein in InterPro
IPR004219 TTvirus_Unk
PfamiView protein in Pfam
PF02956 TT_ORF1, 1 hit

Sequencei

Sequence statusi: Complete.

Q9QUB8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAYGWWRRRR RRWRRWRRRP WRRRWRTRRR RPARRRGRRR NVRRRRRGGR
60 70 80 90 100
WRRRYRRWKR KGRRRKKAKI IIRQWQPNYR RRCNIVGYIP VLICGENTVS
110 120 130 140 150
RNYATHSDDT NYPGPFGGGM TTDKFTLRIL YDEYKRFMNY WTASNEDLDL
160 170 180 190 200
CRYLGVNLYF FRHPDVDFII KINTMPPFLD TELTAPSIHP GMLALDKRAR
210 220 230 240 250
WIPSLKSRPG KKHYIKIRVE APKMFTDKWY PQTDLCDMVL LTVYATTADM
260 270 280 290 300
QYPFGSPLTD SVVVNFQVLQ SMYDQNISIL PTEKSKRTQL HDNITRYTPF
310 320 330 340 350
YNTTQTIAQL KPFVDAGNVT PVSPTTTWGS YINTTKFTTT ATTTYTYPGT
360 370 380 390 400
TTTTVTMLTC NDSWYRGTVY NNQISQLPKK AAEFYSKATK TLLGDTFTTE
410 420 430 440 450
DYTLEYHGGL YSSIWLSAGR SYFETPGVYT DIKYNPFTDR GEGNMLWIDW
460 470 480 490 500
LSKKNMNYDK VQSKCLISDL PLWAAAYGYV EFCAKSTGDQ NIHMNAKLLI
510 520 530 540 550
RSPFTDPQLL VHTDPTKGFV PYSLNFGNGK MPGGSSNVPI RMRAKWYPTL
560 570 580 590 600
FHQQEVLEAL AQSGPFAYHS DIKKVSLGMK YRFKWIWGGN PVRQQVVRNP
610 620 630 640 650
CKETHSSGNR VPRSLQIVDP KYNSPELTFH TWDFRRGLFG PKAIQRMQQQ
660 670 680 690 700
PTTTDIFSAG RKRPRRDTEV YHSSQEGEQK ESLLFLPVKL LRRVPPWEDS
710 720 730 740 750
QQEESGSQSS EEETQTVSQQ LKQQLQQQRI LGVKLRLLFN QVQKIQQNQD
760 770
INPTLLPRGG DLASLFQIAP
Length:770
Mass (Da):90,377
Last modified:May 1, 2000 - v1
Checksum:i636E01C7DF18C38B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB026347 Genomic DNA Translation: BAA85666.1

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB026347 Genomic DNA Translation: BAA85666.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiQ9QUB8

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

OrthoDBiVOG0900003O

Family and domain databases

InterProiView protein in InterPro
IPR004219 TTvirus_Unk
PfamiView protein in Pfam
PF02956 TT_ORF1, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiCAPSD_TTVV2
AccessioniPrimary (citable) accession number: Q9QUB8
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: May 1, 2000
Last modified: May 23, 2018
This is version 37 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again