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UniProtKB - Q9NWC5 (TM45A_HUMAN)

Entry version 114 (13 Feb 2019)
Sequence version 1 (01 Oct 2000)
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Protein

Transmembrane protein 45A

Gene

TMEM45A

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Experimental evidence at transcript leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Transmembrane protein 45A
Alternative name(s):
DNA polymerase-transactivated protein 4
Dermal papilla-derived protein 7
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:TMEM45A
Synonyms:DERP7, DNAPTP4
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiHomo sapiens (Human)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri9606 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000005640 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 3

Organism-specific databases

Eukaryotic Pathogen Database Resources

More...EuPathDBi		HostDB:ENSG00000181458.10

Human Gene Nomenclature Database

More...HGNCi		HGNC:25480 TMEM45A

neXtProt; the human protein knowledge platform

More...neXtProti		NX_Q9NWC5

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular_location_section">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei7 – 27HelicalSequence analysisAdd BLAST21
Transmembranei51 – 71HelicalSequence analysisAdd BLAST21
Transmembranei100 – 120HelicalSequence analysisAdd BLAST21
Transmembranei150 – 170HelicalSequence analysisAdd BLAST21
Transmembranei218 – 238HelicalSequence analysisAdd BLAST21

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Membrane

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

Organism-specific databases

DisGeNET

More...DisGeNETi		55076

Open Targets

More...OpenTargetsi		ENSG00000181458

The Pharmacogenetics and Pharmacogenomics Knowledge Base

More...PharmGKBi		PA134868262

Polymorphism and mutation databases

BioMuta curated single-nucleotide variation and disease association database

More...BioMutai		TMEM45A

Domain mapping of disease mutations (DMDM)

More...DMDMi		28380044

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00000725691 – 275Transmembrane protein 45AAdd BLAST275

Proteomic databases

jPOST - Japan Proteome Standard Repository/Database

More...jPOSTi		Q9NWC5

MaxQB - The MaxQuant DataBase

More...MaxQBi		Q9NWC5

PaxDb, a database of protein abundance averages across all three domains of life

More...PaxDbi		Q9NWC5

PeptideAtlas

More...PeptideAtlasi		Q9NWC5

PRoteomics IDEntifications database

More...PRIDEi		Q9NWC5

ProteomicsDB human proteome resource

More...ProteomicsDBi		82926

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...iPTMneti		Q9NWC5

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...PhosphoSitePlusi		Q9NWC5

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...Bgeei		ENSG00000181458 Expressed in 192 organ(s), highest expression level in zone of skin

ExpressionAtlas, Differential and Baseline Expression

More...ExpressionAtlasi		Q9NWC5 baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...Genevisiblei		Q9NWC5 HS

Organism-specific databases

Human Protein Atlas

More...HPAi		HPA062101

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGrid)

More...BioGridi		120393, 1 interactor

Protein interaction database and analysis system

More...IntActi		Q9NWC5, 7 interactors

Molecular INTeraction database

More...MINTi		Q9NWC5

STRING: functional protein association networks

More...STRINGi		9606.ENSP00000319009

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

Protein Model Portal of the PSI-Nature Structural Biology Knowledgebase

More...ProteinModelPortali		Q9NWC5

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...SMRi		Q9NWC5

Database of comparative protein structure models

More...ModBasei		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the TMEM45 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...eggNOGi		ENOG410IG9I Eukaryota
ENOG410ZTA1 LUCA

Ensembl GeneTree

More...GeneTreei		ENSGT00940000155530

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...HOGENOMi		HOG000136727

The HOVERGEN Database of Homologous Vertebrate Genes

More...HOVERGENi		HBG008722

InParanoid: Eukaryotic Ortholog Groups

More...InParanoidi		Q9NWC5

Database of Orthologous Groups

More...OrthoDBi		1297629at2759

Database for complete collections of gene phylogenies

More...PhylomeDBi		Q9NWC5

TreeFam database of animal gene trees

More...TreeFami		TF328673

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR006904 DUF716_TMEM45

The PANTHER Classification System

More...PANTHERi		PTHR16007 PTHR16007, 1 hit

Pfam protein domain database

More...Pfami		View protein in Pfam
PF04819 DUF716, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All

Q9NWC5-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGNFRGHALP GTFFFIIGLW WCTKSILKYI CKKQKRTCYL GSKTLFYRLE 
        60         70         80         90        100
ILEGITIVGM ALTGMAGEQF IPGGPHLMLY DYKQGHWNQL LGWHHFTMYF 
       110        120        130        140        150
FFGLLGVADI LCFTISSLPV SLTKLMLSNA LFVEAFIFYN HTHGREMLDI 
       160        170        180        190        200
FVHQLLVLVV FLTGLVAFLE FLVRNNVLLE LLRSSLILLQ GSWFFQIGFV 
       210        220        230        240        250
LYPPSGGPAW DLMDHENILF LTICFCWHYA VTIVIVGMNY AFITWLVKSR 
       260        270 
LKRLCSSEVG LLKNAEREQE SEEEM
Length:275
Mass (Da):31,680
Last modified:October 1, 2000 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iE005FF448116EC9E
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
J3KQ06J3KQ06_HUMAN
Transmembrane protein 45A, isoform ...
TMEM45A hCG_1811389
291Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
C9J9Z5C9J9Z5_HUMAN
Transmembrane protein 45A
TMEM45A
191Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
AB013911 mRNA Translation: BAB87801.1
AY450392 mRNA Translation: AAR21085.1
AK000996 mRNA Translation: BAA91458.1
BC040355 mRNA Translation: AAH40355.1

The Consensus CDS (CCDS) project

More...CCDSi		CCDS2937.1

NCBI Reference Sequences

More...RefSeqi		NP_060474.1, NM_018004.2

UniGene gene-oriented nucleotide sequence clusters

More...UniGenei		Hs.658956

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...Ensembli		ENST00000323523; ENSP00000319009; ENSG00000181458

Database of genes from NCBI RefSeq genomes

More...GeneIDi		55076

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		hsa:55076

UCSC genome browser

More...UCSCi		uc003dtz.2 human

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB013911 mRNA Translation: BAB87801.1
AY450392 mRNA Translation: AAR21085.1
AK000996 mRNA Translation: BAA91458.1
BC040355 mRNA Translation: AAH40355.1
CCDSiCCDS2937.1
RefSeqiNP_060474.1, NM_018004.2
UniGeneiHs.658956

3D structure databases

ProteinModelPortaliQ9NWC5
SMRiQ9NWC5
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi120393, 1 interactor
IntActiQ9NWC5, 7 interactors
MINTiQ9NWC5
STRINGi9606.ENSP00000319009

PTM databases

iPTMnetiQ9NWC5
PhosphoSitePlusiQ9NWC5

Polymorphism and mutation databases

BioMutaiTMEM45A
DMDMi28380044

Proteomic databases

jPOSTiQ9NWC5
MaxQBiQ9NWC5
PaxDbiQ9NWC5
PeptideAtlasiQ9NWC5
PRIDEiQ9NWC5
ProteomicsDBi82926

Protocols and materials databases

The DNASU plasmid repository

More...DNASUi		55076
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000323523; ENSP00000319009; ENSG00000181458
GeneIDi55076
KEGGihsa:55076
UCSCiuc003dtz.2 human

Organism-specific databases

Comparative Toxicogenomics Database

More...CTDi		55076
DisGeNETi55076
EuPathDBiHostDB:ENSG00000181458.10

GeneCards: human genes, protein and diseases

More...GeneCardsi		TMEM45A
HGNCiHGNC:25480 TMEM45A
HPAiHPA062101
neXtProtiNX_Q9NWC5
OpenTargetsiENSG00000181458
PharmGKBiPA134868262

GenAtlas: human gene database

More...GenAtlasi		Search...

Phylogenomic databases

eggNOGiENOG410IG9I Eukaryota
ENOG410ZTA1 LUCA
GeneTreeiENSGT00940000155530
HOGENOMiHOG000136727
HOVERGENiHBG008722
InParanoidiQ9NWC5
OrthoDBi1297629at2759
PhylomeDBiQ9NWC5
TreeFamiTF328673

Miscellaneous databases

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

More...ChiTaRSi		TMEM45A human

Database of phenotypes from RNA interference screens in Drosophila and Homo sapiens

More...GenomeRNAii		55076

Protein Ontology

More...PROi		PR:Q9NWC5

Gene expression databases

BgeeiENSG00000181458 Expressed in 192 organ(s), highest expression level in zone of skin
ExpressionAtlasiQ9NWC5 baseline and differential
GenevisibleiQ9NWC5 HS

Family and domain databases

InterProiView protein in InterPro
IPR006904 DUF716_TMEM45
PANTHERiPTHR16007 PTHR16007, 1 hit
PfamiView protein in Pfam
PF04819 DUF716, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiTM45A_HUMAN
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q9NWC5
Secondary accession number(s): Q53YW5
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 12, 2003
Last sequence update: October 1, 2000
Last modified: February 13, 2019
This is version 114 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Human chromosome 3
    Human chromosome 3: entries, gene names and cross-references to MIM
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