OLFML3

Functionⁱ

Secreted scaffold protein that plays an essential role in dorsoventral patterning during early development. Stabilizes axial formation by restricting chordin (CHRD) activity on the dorsal side. Acts by facilitating the association between the tolloid proteases and their substrate chordin (CHRD), leading to enhance chordin (CHRD) degradation (By similarity). May have matrix-related function involved in placental and embryonic development, or play a similar role in other physiological processes.By similarity1 Publication

GO - Biological processⁱ

multicellular organism development Source: UniProtKB-KW

View the complete GO annotation on QuickGO ...

Keywordsⁱ

Molecular function	Developmental protein

Molecular function

Developmental protein

Names & Taxonomyⁱ

Protein namesⁱ	Recommended name: Olfactomedin-like protein 3 Alternative name(s): HNOEL-iso hOLF44
Gene namesⁱ	Name:OLFML3 ORF Names:PSEC0035, PSEC0173, PSEC0244, UNQ663/PRO1294
Organismⁱ	Homo sapiens (Human)
Taxonomic identifierⁱ	9606 [NCBI]
Taxonomic lineageⁱ	cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Dipnotetrapodomorpha › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Boreoeutheria › Euarchontoglires › Primates › Haplorrhini › Simiiformes › Catarrhini › Hominoidea › Hominidae › Homininae › Homo
Proteomesⁱ	UP000005640 Componentⁱ: Chromosome 1

Organism-specific databases

EuPathDBⁱ	HostDB:ENSG00000116774.11
Human Gene Nomenclature Database More...HGNCⁱ	HGNC:24956 OLFML3
MIMⁱ	610088 gene
neXtProtⁱ	NX_Q9NRN5

Keywords - Cellular componentⁱ

Secreted

Pathology & Biotechⁱ

Organism-specific databases

DisGeNET More...DisGeNETⁱ	56944
Open Targets More...OpenTargetsⁱ	ENSG00000116774
PharmGKBⁱ	PA134913777

Polymorphism and mutation databases

DMDMⁱ	37999795

DMDMⁱ

37999795

PTM / Processingⁱ

Molecule processing

Feature key	Position(s)	DescriptionActions	Graphical view	Length
Signal peptideⁱ	1 – 21	Sequence analysisAdd BLAST		21
ChainⁱPRO_0000020092	22 – 406	Olfactomedin-like protein 3Add BLAST		385

Amino acid modifications

Feature key	Position(s)	DescriptionActions	Length
Disulfide bondⁱ	135 ↔ 328	PROSITE-ProRule annotation
Glycosylationⁱ	177	N-linked (GlcNAc...) asparagineSequence analysis	1
Glycosylationⁱ	248	N-linked (GlcNAc...) asparagineSequence analysis	1

Keywords - PTMⁱ

Disulfide bond, Glycoprotein

Proteomic databases

EPDⁱ	Q9NRN5
PaxDbⁱ	Q9NRN5
PeptideAtlas More...PeptideAtlasⁱ	Q9NRN5
PRIDEⁱ	Q9NRN5
ProteomicsDBⁱ	82393 82394 [Q9NRN5-2] 82395 [Q9NRN5-3]

PTM databases

iPTMnetⁱ	Q9NRN5
PhosphoSitePlusⁱ	Q9NRN5

Expressionⁱ

Tissue specificityⁱ

Abundant in placenta, moderate in liver and heart, whereas fairly weak in other tissues examined. On term placenta, mainly localized extracellularly surrounding the syncytiotrophoblastic cells and very rarely expressed in the maternal decidua layer.1 Publication

Gene expression databases

Bgeeⁱ	ENSG00000116774
CleanExⁱ	HS_OLFML3
ExpressionAtlasⁱ	Q9NRN5 baseline and differential
Genevisibleⁱ	Q9NRN5 HS

Organism-specific databases

Human Protein Atlas More...HPAⁱ	HPA027991

HPAⁱ

HPA027991

Interactionⁱ

Protein-protein interaction databases

BioGridⁱ	121268, 7 interactors
IntActⁱ	Q9NRN5, 5 interactors
Molecular INTeraction database More...MINTⁱ	Q9NRN5

Structureⁱ

3D structure databases

ProteinModelPortalⁱ	Q9NRN5
SMRⁱ	Q9NRN5
ModBaseⁱ	Search...
MobiDBⁱ	Search...

Family & Domainsⁱ

Domains and Repeats

Feature key	Position(s)	DescriptionActions	Graphical view	Length
Domainⁱ	134 – 401	Olfactomedin-likePROSITE-ProRule annotationAdd BLAST		268

Coiled coil

Feature key	Position(s)	DescriptionActions	Graphical view	Length
Coiled coilⁱ	25 – 101	Sequence analysisAdd BLAST		77

Sequence similaritiesⁱ

Belongs to the OLFML3 family.Curated

Keywords - Domainⁱ

Coiled coil, Signal

Phylogenomic databases

eggNOGⁱ	KOG3545 Eukaryota ENOG410ZJ72 LUCA
Ensembl GeneTree More...GeneTreeⁱ	ENSGT00760000119005
HOGENOMⁱ	HOG000115263
HOVERGENⁱ	HBG108213
InParanoidⁱ	Q9NRN5
OMAⁱ	EGLWAIY
Database of Orthologous Groups More...OrthoDBⁱ	EOG091G07TT
PhylomeDBⁱ	Q9NRN5
TreeFamⁱ	TF352000

Family and domain databases

InterProⁱ	View protein in InterPro IPR003112 Olfac-like_dom IPR031230 OLFML3
PANTHERⁱ	PTHR23192:SF8 PTHR23192:SF8, 1 hit
Pfam protein domain database More...Pfamⁱ	View protein in Pfam PF02191 OLF, 1 hit
SMARTⁱ	View protein in SMART SM00284 OLF, 1 hit
PROSITEⁱ	View protein in PROSITE PS51132 OLF, 1 hit

Sequences (3)ⁱ

Sequence statusⁱ: Complete.

Sequence processingⁱ: The displayed sequence is further processed into a mature form.

This entry describes 3 isoformsⁱ produced by alternative splicing. Align Add to basket Added to basket

Isoform 1 (identifier: Q9NRN5-1) [UniParc]FASTA Add to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MGPSTPLLIL FLLSWSGPLQ GQQHHLVEYM ERRLAALEER LAQCQDQSSR 
        60         70         80         90        100
HAAELRDFKN KMLPLLEVAE KEREALRTEA DTISGRVDRL EREVDYLETQ 
       110        120        130        140        150
NPALPCVEFD EKVTGGPGTK GKGRRNEKYD MVTDCGYTIS QVRSMKILKR 
       160        170        180        190        200
FGGPAGLWTK DPLGQTEKIY VLDGTQNDTA FVFPRLRDFT LAMAARKASR 
       210        220        230        240        250
VRVPFPWVGT GQLVYGGFLY FARRPPGRPG GGGEMENTLQ LIKFHLANRT 
       260        270        280        290        300
VVDSSVFPAE GLIPPYGLTA DTYIDLAADE EGLWAVYATR EDDRHLCLAK 
       310        320        330        340        350
LDPQTLDTEQ QWDTPCPREN AEAAFVICGT LYVVYNTRPA SRARIQCSFD 
       360        370        380        390        400
ASGTLTPERA ALPYFPRRYG AHASLRYNPR ERQLYAWDDG YQIVYKLEMR 

KKEEEV

Length:406

Mass (Da):46,010

Last modified:October 1, 2000 - v1

Checksum:ⁱ0B5DB1A803BB99D6

GO

Isoform 2 (identifier: Q9NRN5-2) [UniParc]FASTA Add to basket

The sequence of this isoform differs from the canonical sequence as follows:
1-20: Missing.
21-38: GQQHHLVEYMERRLAALE → MAQWHCSQRTQAGGHGVG

« Hide

        10         20         30         40         50
MAQWHCSQRT QAGGHGVGER LAQCQDQSSR HAAELRDFKN KMLPLLEVAE 
        60         70         80         90        100
KEREALRTEA DTISGRVDRL EREVDYLETQ NPALPCVEFD EKVTGGPGTK 
       110        120        130        140        150
GKGRRNEKYD MVTDCGYTIS QVRSMKILKR FGGPAGLWTK DPLGQTEKIY 
       160        170        180        190        200
VLDGTQNDTA FVFPRLRDFT LAMAARKASR VRVPFPWVGT GQLVYGGFLY 
       210        220        230        240        250
FARRPPGRPG GGGEMENTLQ LIKFHLANRT VVDSSVFPAE GLIPPYGLTA 
       260        270        280        290        300
DTYIDLAADE EGLWAVYATR EDDRHLCLAK LDPQTLDTEQ QWDTPCPREN 
       310        320        330        340        350
AEAAFVICGT LYVVYNTRPA SRARIQCSFD ASGTLTPERA ALPYFPRRYG 
       360        370        380 
AHASLRYNPR ERQLYAWDDG YQIVYKLEMR KKEEEV

Show »

Length:386

Mass (Da):43,588

Checksum:ⁱACCD914542650DBD

GO

Isoform 3 (identifier: Q9NRN5-3) [UniParc]FASTA Add to basket

The sequence of this isoform differs from the canonical sequence as follows:
134-287: DCGYTISQVR...ADEEGLWAVY → GKQSESRPLT...EDLRVRWDTE
288-406: Missing.

« Hide

        10         20         30         40         50
MGPSTPLLIL FLLSWSGPLQ GQQHHLVEYM ERRLAALEER LAQCQDQSSR 
        60         70         80         90        100
HAAELRDFKN KMLPLLEVAE KEREALRTEA DTISGRVDRL EREVDYLETQ 
       110        120        130        140        150
NPALPCVEFD EKVTGGPGTK GKGRRNEKYD MVTGKQSESR PLTLLRTDIL 
       160        170        180        190        200
PSLLLTLFFT LSQSIVALSS GICFRETSVM PGLLRRGSGD PGRCGTRSFS 
       210        220        230        240        250
ILPKIGGNRW ANAHYSPDHP PWGSSCWRHL ILASISFSCA FLIRLWLHNL 
       260        270        280 
SSEINEDSEA IWWPSWSMDQ GSTGANREDL RVRWDTE

Show »

Length:287

Mass (Da):32,451

Checksum:ⁱE5FA3E724F51D55B

GO

Experimental Info

Feature key	Position(s)	DescriptionActions	Length
Sequence conflictⁱ	118	G → E in BAD96191 (Ref. 5) Curated	1
Sequence conflictⁱ	131	M → K in BAD96941 (Ref. 5) Curated	1
Sequence conflictⁱ	182	V → F in BAD96191 (Ref. 5) Curated	1
Sequence conflictⁱ	277	A → V in AAQ89313 (PubMed:12975309).Curated	1

Alternative sequence

Feature key	Position(s)	DescriptionActions	Length
Alternative sequenceⁱVSP_014128	1 – 20	Missing in isoform 2. CuratedAdd BLAST	20
Alternative sequenceⁱVSP_014129	21 – 38	GQQHH…LAALE → MAQWHCSQRTQAGGHGVG in isoform 2. CuratedAdd BLAST	18
Alternative sequenceⁱVSP_014130	134 – 287	DCGYT…LWAVY → GKQSESRPLTLLRTDILPSL LLTLFFTLSQSIVALSSGIC FRETSVMPGLLRRGSGDPGR CGTRSFSILPKIGGNRWANA HYSPDHPPWGSSCWRHLILA SISFSCAFLIRLWLHNLSSE INEDSEAIWWPSWSMDQGST GANREDLRVRWDTE in isoform 3. 1 PublicationAdd BLAST	154
Alternative sequenceⁱVSP_014131	288 – 406	Missing in isoform 3. 1 PublicationAdd BLAST	119

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	AY464015 mRNA Translation: AAR88262.1 AF201945 mRNA Translation: AAF86881.1 AY358954 mRNA Translation: AAQ89313.1 AK075544 mRNA Translation: BAC11687.1 AK223221 mRNA Translation: BAD96941.1 AK222471 mRNA Translation: BAD96191.1 AK075353 mRNA Translation: BAC11564.1 AK075479 mRNA Translation: BAC11644.1 AL731797 Genomic DNA No translation available. BC009920 mRNA Translation: AAH09920.1
The Consensus CDS (CCDS) project More...CCDSⁱ	CCDS65618.1 [Q9NRN5-2] CCDS870.1 [Q9NRN5-1]
NCBI Reference Sequences More...RefSeqⁱ	NP_001273281.1, NM_001286352.2 [Q9NRN5-2] NP_064575.1, NM_020190.4 [Q9NRN5-1] XP_016857337.1, XM_017001848.1 [Q9NRN5-2]
UniGeneⁱ	Hs.9315

Genome annotation databases

Ensemblⁱ	ENST00000320334; ENSP00000322273; ENSG00000116774 [Q9NRN5-1] ENST00000369551; ENSP00000358564; ENSG00000116774 [Q9NRN5-2]
GeneIDⁱ	56944
KEGGⁱ	hsa:56944
UCSC genome browser More...UCSCⁱ	uc001eer.3 human [Q9NRN5-1]

Keywords - Coding sequence diversityⁱ

Alternative splicing

Similar proteinsⁱ

100% Identity
90% Identity
50% Identity

Protein	Similar proteins		Species	Score	Length
Q9NRN5	Olfactomedin-like 3, isoform CRA_b		HUMAN		406
OLFML3 isoform 3		PANTR		406
OLFML3 isoform 5		PONAB		345
cDNA FLJ58142, highly similar to Olfactomedin-like protein 3		HUMAN		345
OLFML3 isoform 5		PANTR		345
Q9NRN5-2	OLFML3 isoform 2		PANTR		386
OLFML3 isoform 2		PONAB		386

Protein	Similar proteins		Species	Score	Length
Q9NRN5	Olfactomedin-like 3, isoform CRA_b		HUMAN		406
OLFML3 isoform 3		PANTR		406
OLFML3 isoform 5		PONAB		345
UPI0006437492		MICMU		474
Olfactomedin-like 3 (Predicted)		RAT		418
+125
Q9NRN5-2	olfactomedin-like protein 3		TARSY		405
Olfactomedin-like protein 3		CRIGR		469
Uncharacterized protein		NEOLE		434
UPI0005F531CC		COLAP		387
UPI00062A80F7		NOMLE		387
+15

Protein	Similar proteins		Species	Score	Length
Q9NRN5	Olfactomedin-like protein 3		XENLA		392
UPI000069F5C9		XENTR		391
UPI000854C434		Nanorana parkeri		390
UPI0005233C3F		NESNO		404
olfactomedin-like protein 3		DIPOR		406
+240

Cross-referencesⁱ

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	AY464015 mRNA Translation: AAR88262.1 AF201945 mRNA Translation: AAF86881.1 AY358954 mRNA Translation: AAQ89313.1 AK075544 mRNA Translation: BAC11687.1 AK223221 mRNA Translation: BAD96941.1 AK222471 mRNA Translation: BAD96191.1 AK075353 mRNA Translation: BAC11564.1 AK075479 mRNA Translation: BAC11644.1 AL731797 Genomic DNA No translation available. BC009920 mRNA Translation: AAH09920.1
The Consensus CDS (CCDS) project More...CCDSⁱ	CCDS65618.1 [Q9NRN5-2] CCDS870.1 [Q9NRN5-1]
NCBI Reference Sequences More...RefSeqⁱ	NP_001273281.1, NM_001286352.2 [Q9NRN5-2] NP_064575.1, NM_020190.4 [Q9NRN5-1] XP_016857337.1, XM_017001848.1 [Q9NRN5-2]
UniGeneⁱ	Hs.9315

3D structure databases

ProteinModelPortalⁱ	Q9NRN5
SMRⁱ	Q9NRN5
ModBaseⁱ	Search...
MobiDBⁱ	Search...

Protein-protein interaction databases

BioGridⁱ	121268, 7 interactors
IntActⁱ	Q9NRN5, 5 interactors
Molecular INTeraction database More...MINTⁱ	Q9NRN5

PTM databases

iPTMnetⁱ	Q9NRN5
PhosphoSitePlusⁱ	Q9NRN5

Polymorphism and mutation databases

DMDMⁱ	37999795

DMDMⁱ

37999795

Proteomic databases

EPDⁱ	Q9NRN5
PaxDbⁱ	Q9NRN5
PeptideAtlas More...PeptideAtlasⁱ	Q9NRN5
PRIDEⁱ	Q9NRN5
ProteomicsDBⁱ	82393 82394 [Q9NRN5-2] 82395 [Q9NRN5-3]

Protocols and materials databases

The DNASU plasmid repository More...DNASUⁱ	56944
Structural Biology Knowledgebase	Search...

Genome annotation databases

Ensemblⁱ	ENST00000320334; ENSP00000322273; ENSG00000116774 [Q9NRN5-1] ENST00000369551; ENSP00000358564; ENSG00000116774 [Q9NRN5-2]
GeneIDⁱ	56944
KEGGⁱ	hsa:56944
UCSC genome browser More...UCSCⁱ	uc001eer.3 human [Q9NRN5-1]

Organism-specific databases

CTDⁱ	56944
DisGeNET More...DisGeNETⁱ	56944
EuPathDBⁱ	HostDB:ENSG00000116774.11
GeneCardsⁱ	OLFML3
H-InvDBⁱ	HIX0160021
Human Gene Nomenclature Database More...HGNCⁱ	HGNC:24956 OLFML3
Human Protein Atlas More...HPAⁱ	HPA027991
MIMⁱ	610088 gene
neXtProtⁱ	NX_Q9NRN5
Open Targets More...OpenTargetsⁱ	ENSG00000116774
PharmGKBⁱ	PA134913777
GenAtlas: human gene database More...GenAtlasⁱ	Search...

Phylogenomic databases

eggNOGⁱ	KOG3545 Eukaryota ENOG410ZJ72 LUCA
Ensembl GeneTree More...GeneTreeⁱ	ENSGT00760000119005
HOGENOMⁱ	HOG000115263
HOVERGENⁱ	HBG108213
InParanoidⁱ	Q9NRN5
OMAⁱ	EGLWAIY
Database of Orthologous Groups More...OrthoDBⁱ	EOG091G07TT
PhylomeDBⁱ	Q9NRN5
TreeFamⁱ	TF352000

Miscellaneous databases

GeneWikiⁱ	OLFML3
GenomeRNAiⁱ	56944
Protein Ontology More...PROⁱ	PR:Q9NRN5
SOURCEⁱ	Search...

Gene expression databases

Bgeeⁱ	ENSG00000116774
CleanExⁱ	HS_OLFML3
ExpressionAtlasⁱ	Q9NRN5 baseline and differential
Genevisibleⁱ	Q9NRN5 HS

Family and domain databases

InterProⁱ	View protein in InterPro IPR003112 Olfac-like_dom IPR031230 OLFML3
PANTHERⁱ	PTHR23192:SF8 PTHR23192:SF8, 1 hit
Pfam protein domain database More...Pfamⁱ	View protein in Pfam PF02191 OLF, 1 hit
SMARTⁱ	View protein in SMART SM00284 OLF, 1 hit
PROSITEⁱ	View protein in PROSITE PS51132 OLF, 1 hit
ProtoNetⁱ	Search...

Entry informationⁱ

Entry nameⁱ	OLFL3_HUMAN
Accessionⁱ	Q9NRN5Primary (citable) accession number: Q9NRN5 Secondary accession number(s): Q53FR1 , Q53HV9, Q5SQL6, Q69AX9, Q8NBJ2
Entry historyⁱ	Integrated into UniProtKB/Swiss-Prot:	October 24, 2003
	Last sequence update:	October 1, 2000
	Last modified:	June 20, 2018
	This is version 133 of the entry and version 1 of the sequence. See complete history.
Entry statusⁱ	Reviewed (UniProtKB/Swiss-Prot)
Annotation program	Chordata Protein Annotation Program
Disclaimer	Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousⁱ

Keywords - Technical termⁱ

Complete proteome, Reference proteome

Documents

Human chromosome 1
Human chromosome 1: entries, gene names and cross-references to MIM
MIM cross-references
Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
SIMILARITY comments
Index of protein domains and families

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UniProtKB - Q9NRN5 (OLFL3_HUMAN)

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Olfactomedin-like protein 3

Select a section on the left to see content.

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

Organism-specific databases

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted

Extracellular region or secreted

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

Organism-specific databases

Polymorphism and mutation databases

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Amino acid modifications

Proteomic databases

PTM databases

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Organism-specific databases

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Coiled coil

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Phylogenomic databases

Family and domain databases

Experimental Info

Alternative sequence

Sequence databases

Genome annotation databases

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

3D structure databases

Protein-protein interaction databases

PTM databases

Polymorphism and mutation databases

Proteomic databases

Protocols and materials databases

Genome annotation databases

Organism-specific databases

Phylogenomic databases

Miscellaneous databases

Gene expression databases

Family and domain databases

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Documents

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Functionⁱ

GO - Biological processⁱ

Names & Taxonomyⁱ

Subcellular locationⁱ

Pathology & Biotechⁱ

PTM / Processingⁱ

Expressionⁱ

Interactionⁱ

Structureⁱ

Family & Domainsⁱ

Sequence similaritiesⁱ

Cross-referencesⁱ

Entry informationⁱ

Miscellaneousⁱ