UniProtKB - Q9NQW7 (XPP1_HUMAN)
Protein
Xaa-Pro aminopeptidase 1
Gene
XPNPEP1
Organism
Homo sapiens (Human)
Status
Functioni
Contributes to the degradation of bradykinin. Catalyzes the removal of a penultimate prolyl residue from the N-termini of peptides, such as Arg-Pro-Pro.
Catalytic activityi
- Release of any N-terminal amino acid, including proline, that is linked to proline, even from a dipeptide or tripeptide.2 Publications EC:3.4.11.9
Cofactori
Mn2+2 PublicationsNote: Binds 2 manganese ions per subunit.2 Publications
Activity regulationi
Inhibited by apstatin and the metal ion chelators EDTA and 1,10-phenanthroline. Partially inhibited by dithiothreitol. Not inhibited by enalaprilat or amastatin.1 Publication
Kineticsi
- KM=100.6 µM for bradykinin2 Publications
- KM=308 µM for the tripeptide Arg-Pro-Pro2 Publications
pH dependencei
Optimum pH is 8.2.2 Publications
Sites
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Binding sitei | 77 | SubstrateBy similarity | 1 | |
Binding sitei | 395 | Substrate; via tele nitrogenBy similarity | 1 | |
Metal bindingi | 415 | Manganese 1Combined sources1 Publication | 1 | |
Metal bindingi | 426 | Manganese 1Combined sources1 Publication | 1 | |
Metal bindingi | 426 | Manganese 2Combined sources1 Publication | 1 | |
Metal bindingi | 489 | Manganese 2; via tele nitrogenCombined sources1 Publication | 1 | |
Binding sitei | 489 | Substrate; via tele nitrogenBy similarity | 1 | |
Binding sitei | 498 | Substrate; via tele nitrogenBy similarity | 1 | |
Metal bindingi | 523 | Manganese 2Combined sources1 Publication | 1 | |
Binding sitei | 523 | SubstrateBy similarity | 1 | |
Metal bindingi | 537 | Manganese 1Combined sources1 Publication | 1 | |
Metal bindingi | 537 | Manganese 2Combined sources1 Publication | 1 |
GO - Molecular functioni
- aminopeptidase activity Source: UniProtKB
- manganese ion binding Source: UniProtKB
- metalloaminopeptidase activity Source: UniProtKB
- protein homodimerization activity Source: UniProtKB
GO - Biological processi
- bradykinin catabolic process Source: UniProtKB
- proteolysis Source: UniProtKB
Keywordsi
Molecular function | Aminopeptidase, Hydrolase, Metalloprotease, Protease |
Ligand | Manganese, Metal-binding |
Enzyme and pathway databases
BRENDAi | 3.1.8.1, 2681 3.4.11.9, 2681 |
PathwayCommonsi | Q9NQW7 |
SABIO-RKi | Q9NQW7 |
Protein family/group databases
MEROPSi | M24.009 |
Names & Taxonomyi
Protein namesi | Recommended name: Xaa-Pro aminopeptidase 1 (EC:3.4.11.9)Alternative name(s): Aminoacylproline aminopeptidase Cytosolic aminopeptidase P Soluble aminopeptidase P Short name: sAmp X-Pro aminopeptidase 1 X-prolyl aminopeptidase 1, soluble |
Gene namesi | |
Organismi | Homo sapiens (Human) |
Taxonomic identifieri | 9606 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Proteomesi |
|
Organism-specific databases
HGNCi | HGNC:12822, XPNPEP1 |
MIMi | 602443, gene |
neXtProti | NX_Q9NQW7 |
VEuPathDBi | HostDB:ENSG00000108039.17 |
Subcellular locationi
Other locations
- Cytoplasm By similarity
Cytosol
- cytosol Source: HPA
Extracellular region or secreted
- extracellular exosome Source: UniProtKB
Other locations
- cytoplasm Source: UniProtKB
Keywords - Cellular componenti
CytoplasmPathology & Biotechi
Mutagenesis
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Mutagenesisi | 41 | E → A: Reduces activity by 10%. 1 Publication | 1 | |
Mutagenesisi | 477 | W → E: Interferes with dimerization and reduces activity by 94%. 1 Publication | 1 |
Organism-specific databases
DisGeNETi | 7511 |
OpenTargetsi | ENSG00000108039 |
PharmGKBi | PA37415 |
Miscellaneous databases
Pharosi | Q9NQW7, Tchem |
Chemistry databases
ChEMBLi | CHEMBL3782 |
GuidetoPHARMACOLOGYi | 1578 |
Genetic variation databases
BioMutai | XPNPEP1 |
DMDMi | 68566146 |
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Initiator methioninei | Removed1 Publication | |||
ChainiPRO_0000185083 | 2 – 623 | Xaa-Pro aminopeptidase 1Add BLAST | 622 |
Amino acid modifications
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Modified residuei | 304 | N6-acetyllysineCombined sources | 1 |
Keywords - PTMi
AcetylationProteomic databases
CPTACi | CPTAC-694 CPTAC-695 |
EPDi | Q9NQW7 |
jPOSTi | Q9NQW7 |
MassIVEi | Q9NQW7 |
MaxQBi | Q9NQW7 |
PaxDbi | Q9NQW7 |
PeptideAtlasi | Q9NQW7 |
PRIDEi | Q9NQW7 |
ProteomicsDBi | 34080 34174 82211 [Q9NQW7-1] 82212 [Q9NQW7-2] |
PTM databases
iPTMneti | Q9NQW7 |
MetOSitei | Q9NQW7 |
PhosphoSitePlusi | Q9NQW7 |
Expressioni
Tissue specificityi
Expressed in all tissues tested, including pancreas, heart, muscle, kidney, liver, lung and brain. Highest levels in pancreas.1 Publication
Gene expression databases
Bgeei | ENSG00000108039, Expressed in body of pancreas and 241 other tissues |
ExpressionAtlasi | Q9NQW7, baseline and differential |
Genevisiblei | Q9NQW7, HS |
Organism-specific databases
HPAi | ENSG00000108039, Low tissue specificity |
Interactioni
Subunit structurei
Homodimer.
2 PublicationsBinary interactionsi
Hide detailsIsoform 3 [Q9NQW7-3]
With | #Exp. | IntAct |
---|---|---|
DDIT4L [Q96D03] | 3 | EBI-12079490,EBI-742054 |
GORASP2 [Q9H8Y8] | 3 | EBI-12079490,EBI-739467 |
HBG2 [P69892] | 3 | EBI-12079490,EBI-3910089 |
RHOH [Q15669] | 3 | EBI-12079490,EBI-1244971 |
GO - Molecular functioni
- protein homodimerization activity Source: UniProtKB
Protein-protein interaction databases
BioGRIDi | 113346, 82 interactors |
IntActi | Q9NQW7, 16 interactors |
MINTi | Q9NQW7 |
STRINGi | 9606.ENSP00000421566 |
Chemistry databases
BindingDBi | Q9NQW7 |
Miscellaneous databases
RNActi | Q9NQW7, protein |
Structurei
Secondary structure
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details3D structure databases
SMRi | Q9NQW7 |
ModBasei | Search... |
PDBe-KBi | Search... |
Miscellaneous databases
EvolutionaryTracei | Q9NQW7 |
Family & Domainsi
Sequence similaritiesi
Belongs to the peptidase M24B family.Sequence analysis
Phylogenomic databases
eggNOGi | KOG2413, Eukaryota |
GeneTreei | ENSGT00940000157716 |
HOGENOMi | CLU_011781_2_2_1 |
InParanoidi | Q9NQW7 |
OMAi | YRPGKWG |
OrthoDBi | 417805at2759 |
PhylomeDBi | Q9NQW7 |
TreeFami | TF314183 |
Family and domain databases
CDDi | cd01085, APP, 1 hit |
Gene3Di | 3.40.350.10, 2 hits 3.90.230.10, 1 hit |
InterProi | View protein in InterPro IPR029149, Creatin/AminoP/Spt16_NTD IPR036005, Creatinase/aminopeptidase-like IPR000587, Creatinase_N IPR000994, Pept_M24 IPR033740, Pept_M24B IPR032416, Peptidase_M24_C IPR001131, Peptidase_M24B_aminopep-P_CS |
Pfami | View protein in Pfam PF01321, Creatinase_N, 1 hit PF00557, Peptidase_M24, 1 hit PF16188, Peptidase_M24_C, 1 hit |
SUPFAMi | SSF53092, SSF53092, 1 hit SSF55920, SSF55920, 1 hit |
PROSITEi | View protein in PROSITE PS00491, PROLINE_PEPTIDASE, 1 hit |
s (4+)i Sequence
Sequence statusi: Complete.
: The displayed sequence is further processed into a mature form. Sequence processingi
This entry describes 4 produced by isoformsialternative splicing. AlignAdd to basketThis entry has 4 described isoforms and 3 potential isoforms that are computationally mapped.Show allAlign All
Isoform 11 Publication (identifier: Q9NQW7-1) [UniParc]FASTAAdd to basket
This isoform has been chosen as the sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. canonicali
10 20 30 40 50
MPPKVTSELL RQLRQAMRNS EYVTEPIQAY IIPSGDAHQS EYIAPCDCRR
60 70 80 90 100
AFVSGFDGSA GTAIITEEHA AMWTDGRYFL QAAKQMDSNW TLMKMGLKDT
110 120 130 140 150
PTQEDWLVSV LPEGSRVGVD PLIIPTDYWK KMAKVLRSAG HHLIPVKENL
160 170 180 190 200
VDKIWTDRPE RPCKPLLTLG LDYTGISWKD KVADLRLKMA ERNVMWFVVT
210 220 230 240 250
ALDEIAWLFN LRGSDVEHNP VFFSYAIIGL ETIMLFIDGD RIDAPSVKEH
260 270 280 290 300
LLLDLGLEAE YRIQVHPYKS ILSELKALCA DLSPREKVWV SDKASYAVSE
310 320 330 340 350
TIPKDHRCCM PYTPICIAKA VKNSAESEGM RRAHIKDAVA LCELFNWLEK
360 370 380 390 400
EVPKGGVTEI SAADKAEEFR RQQADFVDLS FPTISSTGPN GAIIHYAPVP
410 420 430 440 450
ETNRTLSLDE VYLIDSGAQY KDGTTDVTRT MHFGTPTAYE KECFTYVLKG
460 470 480 490 500
HIAVSAAVFP TGTKGHLLDS FARSALWDSG LDYLHGTGHG VGSFLNVHEG
510 520 530 540 550
PCGISYKTFS DEPLEAGMIV TDEPGYYEDG AFGIRIENVV LVVPVKTKYN
560 570 580 590 600
FNNRGSLTFE PLTLVPIQTK MIDVDSLTDK ECDWLNNYHL TCRDVIGKEL
610 620
QKQGRQEALE WLIRETQPIS KQH
Computationally mapped potential isoform sequencesi
There are 3 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basketQ5T6H7 | Q5T6H7_HUMAN | Xaa-Pro aminopeptidase 1 | XPNPEP1 | 552 | Annotation score: | ||
Q5T6H2 | Q5T6H2_HUMAN | Xaa-Pro aminopeptidase 1 | XPNPEP1 | 303 | Annotation score: | ||
Q5T6H3 | Q5T6H3_HUMAN | Xaa-Pro aminopeptidase 1 | XPNPEP1 | 233 | Annotation score: |
Sequence cautioni
The sequence CAD38640 differs from that shown. Reason: Erroneous initiation. Extended N-terminus.Curated
Experimental Info
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Sequence conflicti | 90 | W → C in AAH13417 (PubMed:15489334).Curated | 1 | |
Sequence conflicti | 131 | K → R in BAF82125 (PubMed:14702039).Curated | 1 | |
Sequence conflicti | 332 | R → P in CAA65068 (PubMed:9465902).Curated | 1 | |
Sequence conflicti | 332 | R → P in AAF97866 (PubMed:10871044).Curated | 1 | |
Sequence conflicti | 496 | N → D in BAD97233 (PubMed:17974005).Curated | 1 | |
Sequence conflicti | 498 | H → R in BAD97233 (PubMed:17974005).Curated | 1 | |
Sequence conflicti | 572 | I → T in BAF82125 (PubMed:14702039).Curated | 1 |
Alternative sequence
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Alternative sequenceiVSP_045250 | 1 | M → MAASRKPPRVRVNHQDFQLR NLRIIEPNEVTHSGDTGVET DGRM in isoform 3 and isoform 4. 1 Publication | 1 | |
Alternative sequenceiVSP_051752 | 398 – 421 | Missing in isoform 2 and isoform 4. 1 PublicationAdd BLAST | 24 |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | X95762 mRNA Translation: CAA65068.1 AF195530 mRNA Translation: AAF97866.1 AF272981 mRNA Translation: AAF75795.1 AK289436 mRNA Translation: BAF82125.1 CR456922 mRNA Translation: CAG33203.1 AK223513 mRNA Translation: BAD97233.1 AL833411 mRNA Translation: CAD38640.1 Different initiation. AL354951 Genomic DNA No translation available. CH471066 Genomic DNA Translation: EAW49577.1 BC005126 mRNA Translation: AAH05126.1 BC007579 mRNA Translation: AAH07579.1 BC013417 mRNA Translation: AAH13417.4 |
CCDSi | CCDS53576.1 [Q9NQW7-4] CCDS7560.2 [Q9NQW7-3] |
RefSeqi | NP_001161076.1, NM_001167604.1 [Q9NQW7-4] NP_001311061.1, NM_001324132.1 [Q9NQW7-1] NP_065116.3, NM_020383.3 [Q9NQW7-3] |
Genome annotation databases
Ensembli | ENST00000322238; ENSP00000324011; ENSG00000108039 [Q9NQW7-4] ENST00000502935; ENSP00000421566; ENSG00000108039 [Q9NQW7-3] |
GeneIDi | 7511 |
KEGGi | hsa:7511 |
UCSCi | uc001kyp.2, human [Q9NQW7-1] |
Keywords - Coding sequence diversityi
Alternative splicingSimilar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | X95762 mRNA Translation: CAA65068.1 AF195530 mRNA Translation: AAF97866.1 AF272981 mRNA Translation: AAF75795.1 AK289436 mRNA Translation: BAF82125.1 CR456922 mRNA Translation: CAG33203.1 AK223513 mRNA Translation: BAD97233.1 AL833411 mRNA Translation: CAD38640.1 Different initiation. AL354951 Genomic DNA No translation available. CH471066 Genomic DNA Translation: EAW49577.1 BC005126 mRNA Translation: AAH05126.1 BC007579 mRNA Translation: AAH07579.1 BC013417 mRNA Translation: AAH13417.4 |
CCDSi | CCDS53576.1 [Q9NQW7-4] CCDS7560.2 [Q9NQW7-3] |
RefSeqi | NP_001161076.1, NM_001167604.1 [Q9NQW7-4] NP_001311061.1, NM_001324132.1 [Q9NQW7-1] NP_065116.3, NM_020383.3 [Q9NQW7-3] |
3D structure databases
Select the link destinations: PDBei RCSB PDBi PDBji Links Updated | PDB entry | Method | Resolution (Å) | Chain | Positions | PDBsum |
3CTZ | X-ray | 1.60 | A | 1-623 | [»] | |
SMRi | Q9NQW7 | |||||
ModBasei | Search... | |||||
PDBe-KBi | Search... |
Protein-protein interaction databases
BioGRIDi | 113346, 82 interactors |
IntActi | Q9NQW7, 16 interactors |
MINTi | Q9NQW7 |
STRINGi | 9606.ENSP00000421566 |
Chemistry databases
BindingDBi | Q9NQW7 |
ChEMBLi | CHEMBL3782 |
GuidetoPHARMACOLOGYi | 1578 |
Protein family/group databases
MEROPSi | M24.009 |
PTM databases
iPTMneti | Q9NQW7 |
MetOSitei | Q9NQW7 |
PhosphoSitePlusi | Q9NQW7 |
Genetic variation databases
BioMutai | XPNPEP1 |
DMDMi | 68566146 |
Proteomic databases
CPTACi | CPTAC-694 CPTAC-695 |
EPDi | Q9NQW7 |
jPOSTi | Q9NQW7 |
MassIVEi | Q9NQW7 |
MaxQBi | Q9NQW7 |
PaxDbi | Q9NQW7 |
PeptideAtlasi | Q9NQW7 |
PRIDEi | Q9NQW7 |
ProteomicsDBi | 34080 34174 82211 [Q9NQW7-1] 82212 [Q9NQW7-2] |
Protocols and materials databases
ABCDi | Q9NQW7, 2 sequenced antibodies |
Antibodypediai | 31645, 185 antibodies |
DNASUi | 7511 |
Genome annotation databases
Ensembli | ENST00000322238; ENSP00000324011; ENSG00000108039 [Q9NQW7-4] ENST00000502935; ENSP00000421566; ENSG00000108039 [Q9NQW7-3] |
GeneIDi | 7511 |
KEGGi | hsa:7511 |
UCSCi | uc001kyp.2, human [Q9NQW7-1] |
Organism-specific databases
CTDi | 7511 |
DisGeNETi | 7511 |
GeneCardsi | XPNPEP1 |
HGNCi | HGNC:12822, XPNPEP1 |
HPAi | ENSG00000108039, Low tissue specificity |
MIMi | 602443, gene |
neXtProti | NX_Q9NQW7 |
OpenTargetsi | ENSG00000108039 |
PharmGKBi | PA37415 |
VEuPathDBi | HostDB:ENSG00000108039.17 |
GenAtlasi | Search... |
Phylogenomic databases
eggNOGi | KOG2413, Eukaryota |
GeneTreei | ENSGT00940000157716 |
HOGENOMi | CLU_011781_2_2_1 |
InParanoidi | Q9NQW7 |
OMAi | YRPGKWG |
OrthoDBi | 417805at2759 |
PhylomeDBi | Q9NQW7 |
TreeFami | TF314183 |
Enzyme and pathway databases
BRENDAi | 3.1.8.1, 2681 3.4.11.9, 2681 |
PathwayCommonsi | Q9NQW7 |
SABIO-RKi | Q9NQW7 |
Miscellaneous databases
BioGRID-ORCSi | 7511, 9 hits in 878 CRISPR screens |
ChiTaRSi | XPNPEP1, human |
EvolutionaryTracei | Q9NQW7 |
GeneWikii | XPNPEP1 |
GenomeRNAii | 7511 |
Pharosi | Q9NQW7, Tchem |
PROi | PR:Q9NQW7 |
RNActi | Q9NQW7, protein |
SOURCEi | Search... |
Gene expression databases
Bgeei | ENSG00000108039, Expressed in body of pancreas and 241 other tissues |
ExpressionAtlasi | Q9NQW7, baseline and differential |
Genevisiblei | Q9NQW7, HS |
Family and domain databases
CDDi | cd01085, APP, 1 hit |
Gene3Di | 3.40.350.10, 2 hits 3.90.230.10, 1 hit |
InterProi | View protein in InterPro IPR029149, Creatin/AminoP/Spt16_NTD IPR036005, Creatinase/aminopeptidase-like IPR000587, Creatinase_N IPR000994, Pept_M24 IPR033740, Pept_M24B IPR032416, Peptidase_M24_C IPR001131, Peptidase_M24B_aminopep-P_CS |
Pfami | View protein in Pfam PF01321, Creatinase_N, 1 hit PF00557, Peptidase_M24, 1 hit PF16188, Peptidase_M24_C, 1 hit |
SUPFAMi | SSF53092, SSF53092, 1 hit SSF55920, SSF55920, 1 hit |
PROSITEi | View protein in PROSITE PS00491, PROLINE_PEPTIDASE, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | XPP1_HUMAN | |
Accessioni | Q9NQW7Primary (citable) accession number: Q9NQW7 Secondary accession number(s): A8K071 Q96D23 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | July 5, 2005 |
Last sequence update: | January 23, 2007 | |
Last modified: | February 10, 2021 | |
This is version 173 of the entry and version 3 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Chordata Protein Annotation Program | |
Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. |
Miscellaneousi
Keywords - Technical termi
3D-structure, Direct protein sequencing, Reference proteomeDocuments
- Human chromosome 10
Human chromosome 10: entries, gene names and cross-references to MIM - MIM cross-references
Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot - PDB cross-references
Index of Protein Data Bank (PDB) cross-references - SIMILARITY comments
Index of protein domains and families - Peptidase families
Classification of peptidase families and list of entries