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Entry version 157 (07 Oct 2020)
Sequence version 1 (01 Oct 2000)
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Protein

Putative RNA-binding protein Luc7-like 1

Gene

LUC7L

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

May bind to RNA via its Arg/Ser-rich domain.1 Publication

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

Pathway Commons web resource for biological pathway data

More...
PathwayCommonsi
Q9NQ29

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Putative RNA-binding protein Luc7-like 1
Alternative name(s):
Putative SR protein LUC7B1
SR+89
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:LUC7L
Synonyms:LUC7L1
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiHomo sapiens (Human)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri9606 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000005640 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 16

Organism-specific databases

Eukaryotic Pathogen Database Resources

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EuPathDBi
HostDB:ENSG00000007392.16

Human Gene Nomenclature Database

More...
HGNCi
HGNC:6723, LUC7L

Online Mendelian Inheritance in Man (OMIM)

More...
MIMi
607782, gene

neXtProt; the human protein knowledge platform

More...
neXtProti
NX_Q9NQ29

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

Organism-specific databases

DisGeNET

More...
DisGeNETi
55692

Open Targets

More...
OpenTargetsi
ENSG00000007392

The Pharmacogenetics and Pharmacogenomics Knowledge Base

More...
PharmGKBi
PA30485

Miscellaneous databases

Pharos NIH Druggable Genome Knowledgebase

More...
Pharosi
Q9NQ29, Tbio

Polymorphism and mutation databases

BioMuta curated single-nucleotide variation and disease association database

More...
BioMutai
LUC7L

Domain mapping of disease mutations (DMDM)

More...
DMDMi
47116932

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00001872801 – 371Putative RNA-binding protein Luc7-like 1Add BLAST371

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei332PhosphoserineCombined sources1
Modified residuei336PhosphoserineCombined sources1
Modified residuei363PhosphoserineCombined sources1

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - PTMi

Phosphoprotein

Proteomic databases

Encyclopedia of Proteome Dynamics

More...
EPDi
Q9NQ29

jPOST - Japan Proteome Standard Repository/Database

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jPOSTi
Q9NQ29

MassIVE - Mass Spectrometry Interactive Virtual Environment

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MassIVEi
Q9NQ29

MaxQB - The MaxQuant DataBase

More...
MaxQBi
Q9NQ29

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q9NQ29

PeptideAtlas

More...
PeptideAtlasi
Q9NQ29

PRoteomics IDEntifications database

More...
PRIDEi
Q9NQ29

ProteomicsDB: a multi-organism proteome resource

More...
ProteomicsDBi
82058 [Q9NQ29-1]
82059 [Q9NQ29-2]
82060 [Q9NQ29-3]

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q9NQ29

MetOSite database of methionine sulfoxide sites

More...
MetOSitei
Q9NQ29

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
Q9NQ29

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the 'Expression' section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified 'at protein level'.<br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Ubiquitous.1 Publication

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSG00000007392, Expressed in tendon and 228 other tissues

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q9NQ29, baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q9NQ29, HS

Organism-specific databases

Human Protein Atlas

More...
HPAi
ENSG00000007392, Low tissue specificity

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the '<a href="http://www.uniprot.org/help/interaction%5Fsection">Interaction</a>' section provides information about binary protein-protein interactions. The data presented in this section are a quality-filtered subset of binary interactions automatically derived from the <a href="https://www.ebi.ac.uk/intact/">IntAct database</a>. It is updated at every <a href="http://www.uniprot.org/help/synchronization">UniProt release</a>.<p><a href='/help/binary_interactions' target='_top'>More...</a></p>Binary interactionsi

Hide details

GO - Molecular functioni

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGRID)

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BioGRIDi
120818, 152 interactors

Protein interaction database and analysis system

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IntActi
Q9NQ29, 81 interactors

Molecular INTeraction database

More...
MINTi
Q9NQ29

STRING: functional protein association networks

More...
STRINGi
9606.ENSP00000293872

Miscellaneous databases

RNAct, Protein-RNA interaction predictions for model organisms.

More...
RNActi
Q9NQ29, protein

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

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SMRi
Q9NQ29

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and domains' section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili87 – 177Sequence analysisAdd BLAST91
Coiled coili218 – 259Sequence analysisAdd BLAST42

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi243 – 362Arg/Ser-richAdd BLAST120

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the Luc7 family.Curated

Keywords - Domaini

Coiled coil

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

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eggNOGi
KOG0796, Eukaryota

Ensembl GeneTree

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GeneTreei
ENSGT00950000183213

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_030397_3_1_1

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q9NQ29

Identification of Orthologs from Complete Genome Data

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OMAi
CPYDLFQ

Database of Orthologous Groups

More...
OrthoDBi
1499212at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q9NQ29

TreeFam database of animal gene trees

More...
TreeFami
TF317607

Family and domain databases

Integrated resource of protein families, domains and functional sites

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InterProi
View protein in InterPro
IPR004882, Luc7-rel

The PANTHER Classification System

More...
PANTHERi
PTHR12375, PTHR12375, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF03194, LUC7, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (3+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 3 <p>This subsection of the 'Sequence' section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform. This section is only present in reviewed entries, i.e. in UniProtKB/Swiss-Prot.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 3 described isoforms and 8 potential isoforms that are computationally mapped.Show allAlign All

Isoform 1 (identifier: Q9NQ29-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MSAQAQMRAL LDQLMGTARD GDETRQRVKF TDDRVCKSHL LDCCPHDILA
60 70 80 90 100
GTRMDLGECT KIHDLALRAD YEIASKERDL FFELDAMDHL ESFIAECDRR
110 120 130 140 150
TELAKKRLAE TQEEISAEVS AKAEKVHELN EEIGKLLAKA EQLGAEGNVD
160 170 180 190 200
ESQKILMEVE KVRAKKKEAE EEYRNSMPAS SFQQQKLRVC EVCSAYLGLH
210 220 230 240 250
DNDRRLADHF GGKLHLGFIQ IREKLDQLRK TVAEKQEKRN QDRLRRREER
260 270 280 290 300
EREERLSRRS GSRTRDRRRS RSRDRRRRRS RSTSRERRKL SRSRSRDRHR
310 320 330 340 350
RHRSRSRSHS RGHRRASRDR SAKYKFSRER ASREESWESG RSERGPPDWR
360 370
LESSNGKMAS RRSEEKEAGE I
Length:371
Mass (Da):43,728
Last modified:October 1, 2000 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iC277F424F5F5659C
GO
Isoform 2 (identifier: Q9NQ29-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     326-371: Missing.

Note: May be due to an intron retention.Curated
Show »
Length:325
Mass (Da):38,405
Checksum:i35D03C10999A44B6
GO
Isoform 3 (identifier: Q9NQ29-3) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-20: MSAQAQMRALLDQLMGTARD → MQM

Show »
Length:354
Mass (Da):41,929
Checksum:iB73044140DECCC9F
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 8 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A8MYV2A8MYV2_HUMAN
LUC7-like (S. cerevisiae)
LUC7L hCG_22425, LA16c-OS12.1-007
272Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
B8ZZ10B8ZZ10_HUMAN
LUC7-like (S. cerevisiae)
LUC7L LA16c-OS12.1-015
182Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
B8ZZ08B8ZZ08_HUMAN
LUC7-like (S. cerevisiae)
LUC7L LA16c-OS12.1-016
170Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
B8ZZ09B8ZZ09_HUMAN
LUC7-like (S. cerevisiae)
LUC7L LA16c-OS12.1-012
84Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
H7C2U4H7C2U4_HUMAN
Putative RNA-binding protein Luc7-l...
LUC7L
60Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
B8ZZ12B8ZZ12_HUMAN
LUC7-like (S. cerevisiae)
LUC7L LA16c-OS12.1-020
32Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
F8WBC1F8WBC1_HUMAN
Putative RNA-binding protein Luc7-l...
LUC7L
42Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
F2Z322F2Z322_HUMAN
Putative RNA-binding protein Luc7-l...
LUC7L
55Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti171E → V in AAK61218 (PubMed:11157797).Curated1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_0102141 – 20MSAQA…GTARD → MQM in isoform 3. 1 PublicationAdd BLAST20
Alternative sequenceiVSP_010215326 – 371Missing in isoform 2. 2 PublicationsAdd BLAST46

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AJ404326 mRNA Translation: CAB93981.1
AJ404326 mRNA Translation: CAB93982.1
AY005111 mRNA Translation: AAG22846.1
AE006462 Genomic DNA Translation: AAK61218.1
AK001093 mRNA Translation: BAA91500.1
Z69890, Z69706 Genomic DNA Translation: CAM26671.1
CH471112 Genomic DNA Translation: EAW85853.1
BC003194 mRNA Translation: AAH03194.1
BC065198 mRNA Translation: AAH65198.1

The Consensus CDS (CCDS) project

More...
CCDSi
CCDS10401.1 [Q9NQ29-2]
CCDS32348.1 [Q9NQ29-1]

NCBI Reference Sequences

More...
RefSeqi
NP_001307155.1, NM_001320226.1 [Q9NQ29-2]
NP_001317349.1, NM_001330420.1
NP_060502.1, NM_018032.4 [Q9NQ29-2]
NP_958815.1, NM_201412.2 [Q9NQ29-1]

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENST00000293872; ENSP00000293872; ENSG00000007392 [Q9NQ29-1]
ENST00000337351; ENSP00000337507; ENSG00000007392 [Q9NQ29-2]
ENST00000397783; ENSP00000380885; ENSG00000007392 [Q9NQ29-2]

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
55692

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
hsa:55692

UCSC genome browser

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UCSCi
uc002cga.2, human [Q9NQ29-1]

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ404326 mRNA Translation: CAB93981.1
AJ404326 mRNA Translation: CAB93982.1
AY005111 mRNA Translation: AAG22846.1
AE006462 Genomic DNA Translation: AAK61218.1
AK001093 mRNA Translation: BAA91500.1
Z69890, Z69706 Genomic DNA Translation: CAM26671.1
CH471112 Genomic DNA Translation: EAW85853.1
BC003194 mRNA Translation: AAH03194.1
BC065198 mRNA Translation: AAH65198.1
CCDSiCCDS10401.1 [Q9NQ29-2]
CCDS32348.1 [Q9NQ29-1]
RefSeqiNP_001307155.1, NM_001320226.1 [Q9NQ29-2]
NP_001317349.1, NM_001330420.1
NP_060502.1, NM_018032.4 [Q9NQ29-2]
NP_958815.1, NM_201412.2 [Q9NQ29-1]

3D structure databases

SMRiQ9NQ29
ModBaseiSearch...

Protein-protein interaction databases

BioGRIDi120818, 152 interactors
IntActiQ9NQ29, 81 interactors
MINTiQ9NQ29
STRINGi9606.ENSP00000293872

PTM databases

iPTMnetiQ9NQ29
MetOSiteiQ9NQ29
PhosphoSitePlusiQ9NQ29

Polymorphism and mutation databases

BioMutaiLUC7L
DMDMi47116932

Proteomic databases

EPDiQ9NQ29
jPOSTiQ9NQ29
MassIVEiQ9NQ29
MaxQBiQ9NQ29
PaxDbiQ9NQ29
PeptideAtlasiQ9NQ29
PRIDEiQ9NQ29
ProteomicsDBi82058 [Q9NQ29-1]
82059 [Q9NQ29-2]
82060 [Q9NQ29-3]

Protocols and materials databases

Antibodypedia a portal for validated antibodies

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Antibodypediai
22529, 208 antibodies

The DNASU plasmid repository

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DNASUi
55692

Genome annotation databases

EnsembliENST00000293872; ENSP00000293872; ENSG00000007392 [Q9NQ29-1]
ENST00000337351; ENSP00000337507; ENSG00000007392 [Q9NQ29-2]
ENST00000397783; ENSP00000380885; ENSG00000007392 [Q9NQ29-2]
GeneIDi55692
KEGGihsa:55692
UCSCiuc002cga.2, human [Q9NQ29-1]

Organism-specific databases

Comparative Toxicogenomics Database

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CTDi
55692
DisGeNETi55692
EuPathDBiHostDB:ENSG00000007392.16

GeneCards: human genes, protein and diseases

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GeneCardsi
LUC7L
HGNCiHGNC:6723, LUC7L
HPAiENSG00000007392, Low tissue specificity
MIMi607782, gene
neXtProtiNX_Q9NQ29
OpenTargetsiENSG00000007392
PharmGKBiPA30485

GenAtlas: human gene database

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GenAtlasi
Search...

Phylogenomic databases

eggNOGiKOG0796, Eukaryota
GeneTreeiENSGT00950000183213
HOGENOMiCLU_030397_3_1_1
InParanoidiQ9NQ29
OMAiCPYDLFQ
OrthoDBi1499212at2759
PhylomeDBiQ9NQ29
TreeFamiTF317607

Enzyme and pathway databases

PathwayCommonsiQ9NQ29

Miscellaneous databases

BioGRID ORCS database of CRISPR phenotype screens

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BioGRID-ORCSi
55692, 2 hits in 875 CRISPR screens

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

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ChiTaRSi
LUC7L, human

The Gene Wiki collection of pages on human genes and proteins

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GeneWikii
LUC7L

Database of phenotypes from RNA interference screens in Drosophila and Homo sapiens

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GenomeRNAii
55692
PharosiQ9NQ29, Tbio

Protein Ontology

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PROi
PR:Q9NQ29
RNActiQ9NQ29, protein

The Stanford Online Universal Resource for Clones and ESTs

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SOURCEi
Search...

Gene expression databases

BgeeiENSG00000007392, Expressed in tendon and 228 other tissues
ExpressionAtlasiQ9NQ29, baseline and differential
GenevisibleiQ9NQ29, HS

Family and domain databases

InterProiView protein in InterPro
IPR004882, Luc7-rel
PANTHERiPTHR12375, PTHR12375, 1 hit
PfamiView protein in Pfam
PF03194, LUC7, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiLUC7L_HUMAN
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q9NQ29
Secondary accession number(s): B8ZZ13, Q96S32, Q9NPH4
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 10, 2004
Last sequence update: October 1, 2000
Last modified: October 7, 2020
This is version 157 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. Human chromosome 16
    Human chromosome 16: entries, gene names and cross-references to MIM
  2. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
  3. SIMILARITY comments
    Index of protein domains and families
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