UniProtKB - Q9N5N8 (SURF1_CAEEL)
Protein
SURF1-like protein
Gene
sft-1
Organism
Caenorhabditis elegans
Status
Functioni
Probably involved in the biogenesis of the COX complex.By similarity
Names & Taxonomyi
Protein namesi | Recommended name: SURF1-like protein |
Gene namesi | Name:sft-1 ORF Names:H06I04.2 |
Organismi | Caenorhabditis elegans |
Taxonomic identifieri | 6239 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Ecdysozoa › Nematoda › Chromadorea › Rhabditida › Rhabditina › Rhabditomorpha › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis |
Proteomesi |
|
Organism-specific databases
WormBasei | H06I04.2a ; CE23794 ; WBGene00004787 ; sft-1 |
Subcellular locationi
Mitochondrion
- Mitochondrion inner membrane By similarity; Multi-pass membrane protein By similarity
Mitochondrion
- mitochondrial inner membrane Source: UniProtKB-SubCell
Other locations
- integral component of membrane Source: UniProtKB-KW
Topology
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Transmembranei | 81 – 101 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 299 – 319 | HelicalSequence analysisAdd BLAST | 21 |
Keywords - Cellular componenti
Membrane, Mitochondrion, Mitochondrion inner membranePTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000344499 | 1 – 323 | SURF1-like proteinAdd BLAST | 323 |
Proteomic databases
EPDi | Q9N5N8 |
PaxDbi | Q9N5N8 |
PeptideAtlasi | Q9N5N8 |
Expressioni
Gene expression databases
Bgeei | WBGene00004787, Expressed in pharyngeal muscle cell (C elegans) and 5 other tissues |
ExpressionAtlasi | Q9N5N8, baseline and differential |
Family & Domainsi
Sequence similaritiesi
Belongs to the SURF1 family.Curated
Keywords - Domaini
Transmembrane, Transmembrane helixPhylogenomic databases
eggNOGi | KOG1563, Eukaryota |
GeneTreei | ENSGT00530000064194 |
HOGENOMi | CLU_047737_4_0_1 |
InParanoidi | Q9N5N8 |
OMAi | WYSRDVA |
OrthoDBi | 923657at2759 |
PhylomeDBi | Q9N5N8 |
Family and domain databases
CDDi | cd06662, SURF1, 1 hit |
InterProi | View protein in InterPro IPR002994, Surf1/Shy1 |
Pfami | View protein in Pfam PF02104, SURF1, 1 hit |
PROSITEi | View protein in PROSITE PS50895, SURF1, 1 hit |
(1+)i Sequence
Sequence statusi: Complete.
This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All
Q9N5N8-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MPLPAAAFAR ILVVSRQRLF NTRIIHTSGS GYSITQCRFY KTTPCLTHKQ
60 70 80 90 100
SQILDLDAPK SRENREKDGG KSKKSKKSIK WSTGSVLMLT IPVFAFSLGI
110 120 130 140 150
WQTFRLKWKL DLIEHLKGRL NQTAQELPED LSCESLEPLE YCRVTVTGEF
160 170 180 190 200
LHEKEFIISP RGRFDPGKKT SAAAGSMLSE NEMSSHGGHL ITPFRLKNSG
210 220 230 240 250
KIILINRGWL PSFYFDPETR QKTNPRGTLT LPAIVRKTEK RPQFVGQNVP
260 270 280 290 300
EQGVWYYRDL NQMAKHYGTE PVLLDAAYET TVPGGPIGGQ TNINVRNEHL
310 320
NYLTTWFTLT LVTMLMWIHK FRK
Computationally mapped potential isoform sequencesi
There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basketA0A0K3AUV4 | A0A0K3AUV4_CAEEL | SURF1-like protein | sft-1 CELE_H06I04.2, H06I04.2 | 236 | Annotation score: |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | FO081532 Genomic DNA Translation: CCD72250.1 |
RefSeqi | NP_497657.1, NM_065256.3 |
Genome annotation databases
EnsemblMetazoai | H06I04.2a.1; H06I04.2a.1; WBGene00004787 |
GeneIDi | 175415 |
KEGGi | cel:CELE_H06I04.2 |
UCSCi | H06I04.2, c. elegans |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | FO081532 Genomic DNA Translation: CCD72250.1 |
RefSeqi | NP_497657.1, NM_065256.3 |
3D structure databases
SMRi | Q9N5N8 |
ModBasei | Search... |
Protein-protein interaction databases
STRINGi | 6239.H06I04.2 |
Proteomic databases
EPDi | Q9N5N8 |
PaxDbi | Q9N5N8 |
PeptideAtlasi | Q9N5N8 |
Genome annotation databases
EnsemblMetazoai | H06I04.2a.1; H06I04.2a.1; WBGene00004787 |
GeneIDi | 175415 |
KEGGi | cel:CELE_H06I04.2 |
UCSCi | H06I04.2, c. elegans |
Organism-specific databases
CTDi | 175415 |
WormBasei | H06I04.2a ; CE23794 ; WBGene00004787 ; sft-1 |
Phylogenomic databases
eggNOGi | KOG1563, Eukaryota |
GeneTreei | ENSGT00530000064194 |
HOGENOMi | CLU_047737_4_0_1 |
InParanoidi | Q9N5N8 |
OMAi | WYSRDVA |
OrthoDBi | 923657at2759 |
PhylomeDBi | Q9N5N8 |
Miscellaneous databases
PROi | PR:Q9N5N8 |
Gene expression databases
Bgeei | WBGene00004787, Expressed in pharyngeal muscle cell (C elegans) and 5 other tissues |
ExpressionAtlasi | Q9N5N8, baseline and differential |
Family and domain databases
CDDi | cd06662, SURF1, 1 hit |
InterProi | View protein in InterPro IPR002994, Surf1/Shy1 |
Pfami | View protein in Pfam PF02104, SURF1, 1 hit |
PROSITEi | View protein in PROSITE PS50895, SURF1, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | SURF1_CAEEL | |
Accessioni | Q9N5N8Primary (citable) accession number: Q9N5N8 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | July 22, 2008 |
Last sequence update: | October 1, 2000 | |
Last modified: | December 2, 2020 | |
This is version 103 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Caenorhabditis annotation project |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- Caenorhabditis elegans
Caenorhabditis elegans: entries, gene names and cross-references to WormBase - SIMILARITY comments
Index of protein domains and families