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Protein
Submitted name:

SCP-Like extracellular protein

Gene

scl-13

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
SCP-Like extracellular proteinImported
Gene namesi
Name:scl-13Imported
ORF Names:CELE_H10D18.4Imported, H10D18.4Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiH10D18.4 ; CE20952 ; WBGene00019179 ; scl-13

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 16Sequence analysisAdd BLAST16
ChainiPRO_500433038017 – 208Sequence analysisAdd BLAST192

Proteomic databases

PaxDbiQ9N5N4
PeptideAtlasiQ9N5N4

Expressioni

Gene expression databases

BgeeiWBGene00019179 Expressed in 2 organ(s), highest expression level in multi-cellular organism

Interactioni

Protein-protein interaction databases

IntActiQ9N5N4, 1 interactor
STRINGi6239.H10D18.4

Structurei

3D structure databases

ProteinModelPortaliQ9N5N4
SMRiQ9N5N4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini21 – 181SCPInterPro annotationAdd BLAST161

Sequence similaritiesi

Belongs to the CRISP family.SAAS annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiKOG3017 Eukaryota
COG2340 LUCA
GeneTreeiENSGT00900000141278
HOGENOMiHOG000036879
InParanoidiQ9N5N4
OMAiVWSRTAY
OrthoDBiEOG091G048D
PhylomeDBiQ9N5N4

Family and domain databases

Gene3Di3.40.33.10, 1 hit
InterProiView protein in InterPro
IPR001283 Allrgn_V5/Tpx1
IPR014044 CAP_domain
IPR035940 CAP_sf
IPR002413 V5_allergen
PANTHERiPTHR10334 PTHR10334, 1 hit
PfamiView protein in Pfam
PF00188 CAP, 1 hit
PRINTSiPR00838 V5ALLERGEN
PR00837 V5TPXLIKE
SMARTiView protein in SMART
SM00198 SCP, 1 hit
SUPFAMiSSF55797 SSF55797, 1 hit

Sequencei

Sequence statusi: Complete.

Q9N5N4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKFALCLLAI FGCATAQFSS TAQGQIVDAH NKLRSAIAQG SYVAAGTQEP
60 70 80 90 100
SASNMRKIVW DETVAAAAQE YAEGCPDDHS GTSYGENLYW SWSSSAPSSL
110 120 130 140 150
DKFGVAASNS WESEFQKYGW TSTFLDEAGF ATGIGHATQM AWAETSKIGC
160 170 180 190 200
GIKNCGKDAN KKNMYKVAVV CQYDSAGNMM DSDIYQQGET CSACSEDASC

EQDSGLCA
Length:208
Mass (Da):22,147
Last modified:October 1, 2000 - v1
Checksum:i9FE6B3BE8A618BCF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA Translation: CCD71373.1
RefSeqiNP_504055.1, NM_071654.3
UniGeneiCel.3242

Genome annotation databases

EnsemblMetazoaiH10D18.4; H10D18.4; WBGene00019179
GeneIDi178798
KEGGicel:CELE_H10D18.4
UCSCiH10D18.4 c. elegans

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA Translation: CCD71373.1
RefSeqiNP_504055.1, NM_071654.3
UniGeneiCel.3242

3D structure databases

ProteinModelPortaliQ9N5N4
SMRiQ9N5N4
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ9N5N4, 1 interactor
STRINGi6239.H10D18.4

Proteomic databases

PaxDbiQ9N5N4
PeptideAtlasiQ9N5N4

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiH10D18.4; H10D18.4; WBGene00019179
GeneIDi178798
KEGGicel:CELE_H10D18.4
UCSCiH10D18.4 c. elegans

Organism-specific databases

CTDi178798
WormBaseiH10D18.4 ; CE20952 ; WBGene00019179 ; scl-13

Phylogenomic databases

eggNOGiKOG3017 Eukaryota
COG2340 LUCA
GeneTreeiENSGT00900000141278
HOGENOMiHOG000036879
InParanoidiQ9N5N4
OMAiVWSRTAY
OrthoDBiEOG091G048D
PhylomeDBiQ9N5N4

Gene expression databases

BgeeiWBGene00019179 Expressed in 2 organ(s), highest expression level in multi-cellular organism

Family and domain databases

Gene3Di3.40.33.10, 1 hit
InterProiView protein in InterPro
IPR001283 Allrgn_V5/Tpx1
IPR014044 CAP_domain
IPR035940 CAP_sf
IPR002413 V5_allergen
PANTHERiPTHR10334 PTHR10334, 1 hit
PfamiView protein in Pfam
PF00188 CAP, 1 hit
PRINTSiPR00838 V5ALLERGEN
PR00837 V5TPXLIKE
SMARTiView protein in SMART
SM00198 SCP, 1 hit
SUPFAMiSSF55797 SSF55797, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiQ9N5N4_CAEEL
AccessioniPrimary (citable) accession number: Q9N5N4
Entry historyiIntegrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: September 12, 2018
This is version 108 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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