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Entry version 95 (12 Aug 2020)
Sequence version 1 (01 Oct 2000)
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Protein

Helicase protein MOM1

Gene

MOM1

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Required for the heritable maintenance of transcriptional gene silencing (TGS) in heterochromatin, and particularly in the intermediate bivalent heterochromatin, characterized by an unsual methylation pattern consisting in hypermethylated DNA and histone H3 'Lys-4' methylation (H3K4me) together with depletion of histone H3 'Lys-9' methylation (H3K9me), in a chromatin methylation-independent manner, in a non-CG methylation context. May play a role in the RNA polymerase IV/V (Pol-IV/V)-mediated RNA-directed DNA methylation (RdDM) leading to TGS (also called siRNA-mediated TGS pathway), probably by modulating small interfering RNA (siRNA) accumulation. Especially involved in the gene silencing of the transcriptionally silent information region (TSI), 5S ribosomal RNA genes (localized in the pericentromeric heterochromatin of chromosomes 3, 4, and 5) and of 180-bp satellite repeats and 106B long terminal repeat (LTR)-like repeats of the chromocenters. Prevents the aberrant mRNA transcriptional read-through.11 Publications

Miscellaneous

Requires for the complete maintenance of the 35S promoter homology-dependent TGS induced by T-DNA construct insertion.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section indicates at which position the protein binds a given metal ion. The nature of the metal is indicated in the 'Description' field.<p><a href='/help/metal' target='_top'>More...</a></p>Metal bindingi400Iron-sulfur (2Fe-2S)By similarity1
Metal bindingi409Iron-sulfur (2Fe-2S)By similarity1
Metal bindingi412Iron-sulfur (2Fe-2S)By similarity1
Metal bindingi430Iron-sulfur (2Fe-2S)By similarity1

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionHelicase, Hydrolase
Biological processRNA-mediated gene silencing, Transcription, Transcription regulation
Ligand2Fe-2S, ATP-binding, Iron, Iron-sulfur, Metal-binding, Nucleotide-binding

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Helicase protein MOM1 (EC:3.6.4.-)
Alternative name(s):
Protein MAINTENANCE OF METHYLATION
Protein MORPHEUS MOLECULE 1
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:MOM1
Synonyms:MOM
Ordered Locus Names:At1g08060
ORF Names:T6D22.14
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiArabidopsis thaliana (Mouse-ear cress)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri3702 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliopsidaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000006548 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 1

Organism-specific databases

Arabidopsis Information Portal

More...
Araporti
AT1G08060

The Arabidopsis Information Resource

More...
TAIRi
locus:2205205, AT1G08060

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

<p>This subsection of the 'Pathology and Biotech' section describes the in vivo effects caused by ablation of the gene (or one or more transcripts) coding for the protein described in the entry. This includes gene knockout and knockdown, provided experiments have been performed in the context of a whole organism or a specific tissue, and not at the single-cell level.<p><a href='/help/disruption_phenotype' target='_top'>More...</a></p>Disruption phenotypei

Reactivated transcription of heavily methylated silent loci, independently of chromatin demethylation. Releases TSI, 5S ribosomal RNA genes as well as 180-bp and 106B repeats of chromocenters silencing independently of chromatin properties. Partial derepression of 35S promoter homology-dependent TGS in transgenic plants. Abnormal aberrant mRNA transcriptional read-through. Increased expression of minor 5S rRNA species. No nuclear organization alteration.11 Publications

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00004052751 – 2001Helicase protein MOM1Add BLAST2001

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q9M658

PRoteomics IDEntifications database

More...
PRIDEi
Q9M658

ProteomicsDB: a multi-organism proteome resource

More...
ProteomicsDBi
238300

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q9M658

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q9M658, baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q9M658, AT

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

GO - Molecular functioni

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGRID)

More...
BioGRIDi
22563, 7 interactors

Protein interaction database and analysis system

More...
IntActi
Q9M658, 4 interactors

STRING: functional protein association networks

More...
STRINGi
3702.AT1G08060.1

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

Secondary structure

12001
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q9M658

Database of comparative protein structure models

More...
ModBasei
Search...

Protein Data Bank in Europe - Knowledge Base

More...
PDBe-KBi
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini357 – 4482Fe-2S ferredoxin-typeAdd BLAST92
Domaini563 – 722Helicase C-terminalAdd BLAST160

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni953 – 1044Conserved MOM1 Motif 1 (CMM1)Add BLAST92
Regioni1734 – 1815Conserved MOM1 Motif 2 (CMM2), required to mediates gene silencing maintenanceAdd BLAST82
Regioni1993 – 2001Conserved MOM1 Motif 3 (CMM3)9

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and domains' section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili693 – 722Sequence analysisAdd BLAST30
Coiled coili1130 – 1168Sequence analysisAdd BLAST39
Coiled coili1194 – 1217Sequence analysisAdd BLAST24
Coiled coili1736 – 1785Sequence analysisAdd BLAST50

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi1858 – 1962Pro-richAdd BLAST105
Compositional biasi1973 – 1982Poly-Gln10

Keywords - Domaini

Coiled coil

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG0384, Eukaryota

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_001778_0_0_1

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q9M658

Identification of Orthologs from Complete Genome Data

More...
OMAi
SPNIFWT

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q9M658

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR039322, MOM1
IPR027417, P-loop_NTPase

The PANTHER Classification System

More...
PANTHERi
PTHR35116, PTHR35116, 3 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF52540, SSF52540, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

Q9M658-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKKDEKIGLT GRTIYTRSLA ASIPASVEQE TPGLRRSSRG TPSTKVITPA
60 70 80 90 100
SATRKSERLA PSPASVSKKS GGIVKNSTPS SLRRSNRGKT EVSLQSSKGS
110 120 130 140 150
DNSIRKGDTS PDIEQRKDSV EESTDKIKPI MSARSYRALF RGKLKESEAL
160 170 180 190 200
VDASPNEEEL VVVGCSRRIP AGNDDVQGKT DCPPPADAGS KRLPVDETSL
210 220 230 240 250
DKGTDFPLKS VTETEKIVLD ASPIVETGDD SVIGSPSENL ETQKLQDGKT
260 270 280 290 300
DCSPPANAES KTLPVGETSL EKEYPQKFQD DNTDCLPPAN AESKRLPVGE
310 320 330 340 350
TSLEKDTDFP LKSTTETGKM VLYASPIVET RDDSVICSPS TNLETQKLLV
360 370 380 390 400
SKTGLETDIV LPLKRKRDTA EIELDACATV ANGDDHVMSS DGVIPSPSGC
410 420 430 440 450
KNDNRPEMCN TCKKRQKVNG DCQNRSVCSC IVQPVEESDN VTQDMKETGP
460 470 480 490 500
VTSREYEENG QIQHGKSSDP KFYSSVYPEY WVPVQLSDVQ LEQYCQTLFS
510 520 530 540 550
KSLSLSSLSK IDLGALEETL NSVRKTCDHP YVMDASLKQL LTKNLELHEI
560 570 580 590 600
LDVEIKASGK LHLLDKMLTH IKKNGLKAVV FYQATQTPEG LLLGNILEDF
610 620 630 640 650
VGQRFGPKSY EHGIYSSKKN SAINNFNKES QCCVLLLETR ACSQTIKLLR
660 670 680 690 700
ADAFILFGSS LNPSHDVKHV EKIKIESCSE RTKIFRLYSV CTVEEKALIL
710 720 730 740 750
ARQNKRQNKA VENLNRSLTH ALLMWGASYL FDKLDHFHSS ETPDSGVSFE
760 770 780 790 800
QSIMDGVIHE FSSILSSKGG EENEVKLCLL LEAKHAQGTY SSDSTLFGED
810 820 830 840 850
HIKLSDEESP NIFWSKLLGG KNPMWKYPSD TPQRNRKRVQ YFEGSEASPK
860 870 880 890 900
TGDGGNAKKR KKASDDVTDP RVTDPPVDDD ERKASGKDHM GALESPKVIT
910 920 930 940 950
LQSSCKSSGT DGTLDGNDAF GLYSMGSHIS GIPEDMLASQ DWGKIPDESQ
960 970 980 990 1000
RRLHTVLKPK MAKLCQVLHL SDACTSMVGN FLEYVIENHR IYEEPATTFQ
1010 1020 1030 1040 1050
AFQIALSWIA ALLVKQILSH KESLVRANSE LAFKCSRVEV DYIYSILSCM
1060 1070 1080 1090 1100
KSLFLEHTQG LQFDCFGTNS KQSVVSTKLV NESLSGATVR DEKINTKSMR
1110 1120 1130 1140 1150
NSSEDEECMT EKRCSHYSTA TRDIEKTISG IKKKYKKQVQ KLVQEHEEKK
1160 1170 1180 1190 1200
MELLNMYADK KQKLETSKSV EAAVIRITCS RTSTQVGDLK LLDHNYERKF
1210 1220 1230 1240 1250
DEIKSEKNEC LKSLEQMHDV AKKKLAEDEA CWINRIKSWA AKLKVCVPIQ
1260 1270 1280 1290 1300
SGNNKHFSGS SNISQNAPDV QICNNANVEA TYADTNCMAS KVNQVPEAEN
1310 1320 1330 1340 1350
TLGTMSGGST QQVHEMVDVR NDETMDVSAL SREQLTKSQS NEHASITVPE
1360 1370 1380 1390 1400
ILIPADCQEE FAALNVHLSE DQNCDRITSA ASDEDVSSRV PEVSQSLENL
1410 1420 1430 1440 1450
SASPEFSLNR EEALVTTENR RTSHVGFDTD NILDQQNRED CSLDQEIPDE
1460 1470 1480 1490 1500
LAMPVQHLAS VVETRGAAES DQYGQDICPM PSSLAGKQPD PAANTESENL
1510 1520 1530 1540 1550
EEAIEPQSAG SETVETTDFA ASHQGDQVTC PLLSSPTGNQ PAPEANIEGQ
1560 1570 1580 1590 1600
NINTSAEPHV AGPDAVESGD YAVIDQETMG AQDACSLPSG SVGTQSDLGA
1610 1620 1630 1640 1650
NIEGQNVTTV AQLPTDGSDA VVTGGSPVSD QCAQDASPMP LSSPGNHPDT
1660 1670 1680 1690 1700
AVNIEGLDNT SVAEPHISGS DACEMEISEP GPQVERSTFA NLFHEGGVEH
1710 1720 1730 1740 1750
SAGVTALVPS LLNNGTEQIA VQPVPQIPFP VFNDPFLHEL EKLRRESENS
1760 1770 1780 1790 1800
KKTFEEKKSI LKAELERKMA EVQAEFRRKF HEVEAEHNTR TTKIEKDKNL
1810 1820 1830 1840 1850
VIMNKLLANA FLSKCTDKKV SPSGAPRGKI QQLAQRAAQV SALRNYIAPQ
1860 1870 1880 1890 1900
QLQASSFPAP ALVSAPLQLQ QSSFPAPGPA PLQPQASSFP SSVSRPSALL
1910 1920 1930 1940 1950
LNFAVCPMPQ PRQPLISNIA PTPSVTPATN PGLRSPAPHL NSYRPSSSTP
1960 1970 1980 1990 2000
VATATPTSSV PPQALTYSAV SIQQQQEQQP QQSLSSGLQS NNEVVCLSDD

E
Length:2,001
Mass (Da):218,569
Last modified:October 1, 2000 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iB9C85D4E62704441
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A1P8ASM1A0A1P8ASM1_ARATH
ATP-dependent helicase family prote...
MOM MAINTENANCE OF METHYLATION, MOM1, MORPHEUS MOLECULE, MORPHEUS MOLECULE 1, At1g08060
2,002Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

<p>This subsection of the 'Sequence' section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence AAF79839 differs from that shown. Reason: Erroneous gene model prediction.Curated
The sequence BAC42596 differs from that shown. Reason: Erroneous initiation. Truncated N-terminus.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti705K → M in AAF73380 (PubMed:10821279).Curated1
Sequence conflicti1219D → E in AAF73380 (PubMed:10821279).Curated1

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AF213627 mRNA Translation: AAF73380.1
AF213628 Genomic DNA Translation: AAF73381.1
AC026875 Genomic DNA Translation: AAF79839.1 Sequence problems.
CP002684 Genomic DNA Translation: AEE28236.1
CP002684 Genomic DNA Translation: AEE28237.1
AK117959 mRNA Translation: BAC42596.1 Different initiation.
BT006219 mRNA Translation: AAP12868.1

Protein sequence database of the Protein Information Resource

More...
PIRi
D86215

NCBI Reference Sequences

More...
RefSeqi
NP_563806.1, NM_100680.4
NP_849608.1, NM_179277.1

Genome annotation databases

Ensembl plant genome annotation project

More...
EnsemblPlantsi
AT1G08060.1; AT1G08060.1; AT1G08060
AT1G08060.2; AT1G08060.2; AT1G08060

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
837322

Gramene; a comparative resource for plants

More...
Gramenei
AT1G08060.1; AT1G08060.1; AT1G08060
AT1G08060.2; AT1G08060.2; AT1G08060

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
ath:AT1G08060

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF213627 mRNA Translation: AAF73380.1
AF213628 Genomic DNA Translation: AAF73381.1
AC026875 Genomic DNA Translation: AAF79839.1 Sequence problems.
CP002684 Genomic DNA Translation: AEE28236.1
CP002684 Genomic DNA Translation: AEE28237.1
AK117959 mRNA Translation: BAC42596.1 Different initiation.
BT006219 mRNA Translation: AAP12868.1
PIRiD86215
RefSeqiNP_563806.1, NM_100680.4
NP_849608.1, NM_179277.1

3D structure databases

Select the link destinations:

Protein Data Bank Europe

More...
PDBei

Protein Data Bank RCSB

More...
RCSB PDBi

Protein Data Bank Japan

More...
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3VEMX-ray3.20A/B/C/D1700-1814[»]
SMRiQ9M658
ModBaseiSearch...
PDBe-KBiSearch...

Protein-protein interaction databases

BioGRIDi22563, 7 interactors
IntActiQ9M658, 4 interactors
STRINGi3702.AT1G08060.1

PTM databases

iPTMnetiQ9M658

Proteomic databases

PaxDbiQ9M658
PRIDEiQ9M658
ProteomicsDBi238300

Genome annotation databases

EnsemblPlantsiAT1G08060.1; AT1G08060.1; AT1G08060
AT1G08060.2; AT1G08060.2; AT1G08060
GeneIDi837322
GrameneiAT1G08060.1; AT1G08060.1; AT1G08060
AT1G08060.2; AT1G08060.2; AT1G08060
KEGGiath:AT1G08060

Organism-specific databases

AraportiAT1G08060
TAIRilocus:2205205, AT1G08060

Phylogenomic databases

eggNOGiKOG0384, Eukaryota
HOGENOMiCLU_001778_0_0_1
InParanoidiQ9M658
OMAiSPNIFWT
PhylomeDBiQ9M658

Miscellaneous databases

Protein Ontology

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PROi
PR:Q9M658

Gene expression databases

ExpressionAtlasiQ9M658, baseline and differential
GenevisibleiQ9M658, AT

Family and domain databases

InterProiView protein in InterPro
IPR039322, MOM1
IPR027417, P-loop_NTPase
PANTHERiPTHR35116, PTHR35116, 3 hits
SUPFAMiSSF52540, SSF52540, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
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MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiMOM1_ARATH
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q9M658
Secondary accession number(s): Q8GXZ0, Q9LN02, Q9M659
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 8, 2011
Last sequence update: October 1, 2000
Last modified: August 12, 2020
This is version 95 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

3D-structure, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
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