UniProtKB - Q9LXE1 (REM23_ARATH)
Protein
B3 domain-containing protein REM23
Gene
REM23
Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Functioni
Regions
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
DNA bindingi | 19 – 114 | TF-B3 1PROSITE-ProRule annotationAdd BLAST | 96 | |
DNA bindingi | 216 – 308 | TF-B3 2PROSITE-ProRule annotationAdd BLAST | 93 |
GO - Molecular functioni
- DNA binding Source: UniProtKB-KW
Keywordsi
Molecular function | DNA-binding |
Biological process | Transcription, Transcription regulation |
Names & Taxonomyi
Protein namesi | Recommended name: B3 domain-containing protein REM23Alternative name(s): Protein REPRODUCTIVE MERISTEM 23 |
Gene namesi | Name:REM23 Ordered Locus Names:At5g09780 ORF Names:F17I14.30 |
Organismi | Arabidopsis thaliana (Mouse-ear cress) |
Taxonomic identifieri | 3702 [NCBI] |
Taxonomic lineagei | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliopsida › eudicotyledons › Gunneridae › Pentapetalae › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis |
Proteomesi |
|
Organism-specific databases
Araporti | AT5G09780 |
TAIRi | locus:2144831, AT5G09780 |
Subcellular locationi
Keywords - Cellular componenti
NucleusPTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000375116 | 1 – 308 | B3 domain-containing protein REM23Add BLAST | 308 |
Proteomic databases
PaxDbi | Q9LXE1 |
PRIDEi | Q9LXE1 |
ProteomicsDBi | 236225 |
PTM databases
iPTMneti | Q9LXE1 |
Expressioni
Gene expression databases
ExpressionAtlasi | Q9LXE1, baseline and differential |
Genevisiblei | Q9LXE1, AT |
Interactioni
Protein-protein interaction databases
BioGRIDi | 16116, 6 interactors |
IntActi | Q9LXE1, 6 interactors |
STRINGi | 3702.AT5G09780.1 |
Family & Domainsi
Keywords - Domaini
RepeatPhylogenomic databases
HOGENOMi | CLU_083136_0_0_1 |
InParanoidi | Q9LXE1 |
OMAi | LWCKEER |
OrthoDBi | 1210487at2759 |
PhylomeDBi | Q9LXE1 |
Family and domain databases
CDDi | cd10017, B3_DNA, 2 hits |
Gene3Di | 2.40.330.10, 2 hits |
InterProi | View protein in InterPro IPR003340, B3_DNA-bd IPR015300, DNA-bd_pseudobarrel_sf |
Pfami | View protein in Pfam PF02362, B3, 2 hits |
SMARTi | View protein in SMART SM01019, B3, 2 hits |
SUPFAMi | SSF101936, SSF101936, 2 hits |
PROSITEi | View protein in PROSITE PS50863, B3, 2 hits |
i Sequence
Sequence statusi: Complete.
Q9LXE1-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MASNPDFLWC KEERKQESFF KVLKRSDMSS EDTRAIPYDF VINFSDNELS
60 70 80 90 100
GDMKFRVQWG NSWKVKISKN PRFYFMEKSG WEKFVIDNAL GDHEFLTFTH
110 120 130 140 150
KGQMSFTVKI FNKDGKEMMQ PPQSRASFAS SSRVKTEQDV KREEEVLVSS
160 170 180 190 200
DSRSRGPTTA AETNRGGSYK RKLNFGKKKA EETQTYKRTE RTQNSKRTER
210 220 230 240 250
VVSKERVYAG EPSSSVAGFK IFISKSYIKS LAIPKPFGNY MPKEKTRVKI
260 270 280 290 300
HHPDGEKTWK VVFVVKERGQ IFSGGWKRLC KEYPVVFGDT CKFTLITPLE
LLLVVSKP
Sequence cautioni
The sequence BAB09536 differs from that shown. Reason: Erroneous gene model prediction.Curated
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AB020752 Genomic DNA Translation: BAB09536.1 Sequence problems. AL353994 Genomic DNA Translation: CAB89352.1 CP002688 Genomic DNA Translation: AED91445.1 DQ056675 mRNA Translation: AAY78821.1 |
PIRi | T49920 |
RefSeqi | NP_196540.1, NM_121015.2 |
Genome annotation databases
EnsemblPlantsi | AT5G09780.1; AT5G09780.1; AT5G09780 |
GeneIDi | 830838 |
Gramenei | AT5G09780.1; AT5G09780.1; AT5G09780 |
KEGGi | ath:AT5G09780 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AB020752 Genomic DNA Translation: BAB09536.1 Sequence problems. AL353994 Genomic DNA Translation: CAB89352.1 CP002688 Genomic DNA Translation: AED91445.1 DQ056675 mRNA Translation: AAY78821.1 |
PIRi | T49920 |
RefSeqi | NP_196540.1, NM_121015.2 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
BioGRIDi | 16116, 6 interactors |
IntActi | Q9LXE1, 6 interactors |
STRINGi | 3702.AT5G09780.1 |
PTM databases
iPTMneti | Q9LXE1 |
Proteomic databases
PaxDbi | Q9LXE1 |
PRIDEi | Q9LXE1 |
ProteomicsDBi | 236225 |
Genome annotation databases
EnsemblPlantsi | AT5G09780.1; AT5G09780.1; AT5G09780 |
GeneIDi | 830838 |
Gramenei | AT5G09780.1; AT5G09780.1; AT5G09780 |
KEGGi | ath:AT5G09780 |
Organism-specific databases
Araporti | AT5G09780 |
TAIRi | locus:2144831, AT5G09780 |
Phylogenomic databases
HOGENOMi | CLU_083136_0_0_1 |
InParanoidi | Q9LXE1 |
OMAi | LWCKEER |
OrthoDBi | 1210487at2759 |
PhylomeDBi | Q9LXE1 |
Miscellaneous databases
PROi | PR:Q9LXE1 |
Gene expression databases
ExpressionAtlasi | Q9LXE1, baseline and differential |
Genevisiblei | Q9LXE1, AT |
Family and domain databases
CDDi | cd10017, B3_DNA, 2 hits |
Gene3Di | 2.40.330.10, 2 hits |
InterProi | View protein in InterPro IPR003340, B3_DNA-bd IPR015300, DNA-bd_pseudobarrel_sf |
Pfami | View protein in Pfam PF02362, B3, 2 hits |
SMARTi | View protein in SMART SM01019, B3, 2 hits |
SUPFAMi | SSF101936, SSF101936, 2 hits |
PROSITEi | View protein in PROSITE PS50863, B3, 2 hits |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | REM23_ARATH | |
Accessioni | Q9LXE1Primary (citable) accession number: Q9LXE1 Secondary accession number(s): Q9FXW7 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | May 26, 2009 |
Last sequence update: | October 1, 2000 | |
Last modified: | December 2, 2020 | |
This is version 103 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Plant Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- Arabidopsis thaliana
Arabidopsis thaliana: entries and gene names