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Protein

Clavaminate synthase-like protein At3g21360

Gene

At3g21360

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Miscellaneous

May use 2-oxoglutarate as a cosubstrate.By similarity

Cofactori

Fe cationNote: Binds 1 Fe cation per subunit.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi120Iron1
Metal bindingi122Iron1
Metal bindingi313Iron1

GO - Molecular functioni

Keywordsi

Molecular functionOxidoreductase
LigandIron, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Clavaminate synthase-like protein At3g21360 (EC:1.-.-.-)
Gene namesi
Ordered Locus Names:At3g21360
ORF Names:MHC9_4
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 3

Organism-specific databases

AraportiAT3G21360
TAIRilocus:2089423 AT3G21360

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemovedCombined sources
ChainiPRO_00002206042 – 330Clavaminate synthase-like protein At3g21360Add BLAST329

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei2N-acetylalanineCombined sources1

Keywords - PTMi

Acetylation

Proteomic databases

PaxDbiQ9LIG0
PRIDEiQ9LIG0

PTM databases

iPTMnetiQ9LIG0

Expressioni

Gene expression databases

ExpressionAtlasiQ9LIG0 baseline and differential
GenevisibleiQ9LIG0 AT

Interactioni

Protein-protein interaction databases

STRINGi3702.AT3G21360.1

Structurei

Secondary structure

1330
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details

3D structure databases

ProteinModelPortaliQ9LIG0
SMRiQ9LIG0
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9LIG0

Family & Domainsi

Phylogenomic databases

eggNOGiENOG410IH28 Eukaryota
ENOG410XPT7 LUCA
HOGENOMiHOG000272702
InParanoidiQ9LIG0
OMAiLHNEQAY
OrthoDBiEOG09360ERQ
PhylomeDBiQ9LIG0

Family and domain databases

InterProiView protein in InterPro
IPR003819 TauD/TfdA-like
PfamiView protein in Pfam
PF02668 TauD, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9LIG0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAELLLVETP IPQQKHYESK PFPAVISPPS ASIPIPALSL PLFTQTIKTQ
60 70 80 90 100
KHYLDSLLHE SGAVLFRGFP VNSADDFNDV VEAFGFDELP YVGGAAPRTS
110 120 130 140 150
VVGRVFTANE SPPDQKIPFH HEMAQVREFP SKLFFYCEIE PKCGGETPIV
160 170 180 190 200
LSHVVYERMK DKHPEFVQRL EEHGLLYVRV LGEDDDPSSP IGRGWKSTFL
210 220 230 240 250
THDKNLAEQR AVDLGMKLEW TEDGGAKTVM GPIPAIKYDE SRNRKVWFNS
260 270 280 290 300
MVAAYTGWED KRNDPRKAVT FGDGKPLPAD IVHDCLRILE EECVAVPWQR
310 320 330
GDVLLIDNWA VLHSRRPFDP PRRVLASLCK
Length:330
Mass (Da):37,212
Last modified:October 1, 2000 - v1
Checksum:iDE838BFFB70ADF2B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP001305 Genomic DNA Translation: BAB03049.1
CP002686 Genomic DNA Translation: AEE76500.1
AK117772 mRNA Translation: BAC42419.1
RefSeqiNP_188773.1, NM_113031.2
UniGeneiAt.47366
At.63567

Genome annotation databases

EnsemblPlantsiAT3G21360.1; AT3G21360.1; AT3G21360
GeneIDi821690
GrameneiAT3G21360.1; AT3G21360.1; AT3G21360
KEGGiath:AT3G21360

Similar proteinsi

Entry informationi

Entry nameiY3136_ARATH
AccessioniPrimary (citable) accession number: Q9LIG0
Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 30, 2005
Last sequence update: October 1, 2000
Last modified: April 25, 2018
This is version 98 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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