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Protein

Protein CHUP1, chloroplastic

Gene

CHUP1

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Required for the positioning and movement of chloroplasts. Interacts with profilin and actin independent of its polymerization status. Regulates chloroplast localization by anchoring chloroplasts to the plasma membrane and forming a bridge to the actin cytoskeleton.4 Publications

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

  • chloroplast relocation Source: TAIR

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Protein CHUP1, chloroplastic
Alternative name(s):
Protein CHLOROPLAST UNUSUAL POSITIONING 1
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:CHUP1
Ordered Locus Names:At3g25690
ORF Names:T5M7.14
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiArabidopsis thaliana (Mouse-ear cress)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri3702 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000006548 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 3

Organism-specific databases

Arabidopsis Information Portal

More...
Araporti
AT3G25690

The Arabidopsis Information Resource

More...
TAIRi
locus:2102385 AT3G25690

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Chloroplast, Membrane, Plastid, Plastid outer membrane

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

<p>This subsection of the ‘Pathology and Biotech’ section describes the in vivo effects caused by ablation of the gene (or one or more transcripts) coding for the protein described in the entry. This includes gene knockout and knockdown, provided experiments have been performed in the context of a whole organism or a specific tissue, and not at the single-cell level.<p><a href='/help/disruption_phenotype' target='_top'>More...</a></p>Disruption phenotypei

Defective in chloroplast photorelocation movement, leading to damage of the photosynthetic apparatus and subsequent bleaching of leaf color and necrosis under high light conditions. Chloroplasts gathered at the bottom of cells, regardless of the light conditions.1 Publication

Mutagenesis

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/manual/pathology_and_biotech_section">'Pathology and Biotech'</a> section describes the effect of the experimental mutation of one or more amino acid(s) on the biological properties of the protein.<p><a href='/help/mutagen' target='_top'>More...</a></p>Mutagenesisi4R → A: No effect on targeting. Loss of targeting; when associated with A-12 and/or A-20. 1 Publication1
Mutagenesisi12S → A: No effect on targeting. Loss of targeting; when associated with A-4 and/or A-20. 1 Publication1
Mutagenesisi20R → A: No effect on targeting. Loss of targeting; when associated with A-4 and/or A-12. 1 Publication1

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00003781071 – 1004Protein CHUP1, chloroplasticAdd BLAST1004

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei399PhosphoserineCombined sources1

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q9LI74

PRoteomics IDEntifications database

More...
PRIDEi
Q9LI74

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q9LI74

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the ‘Expression’ section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified ‘at protein level’. <br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Expressed in cauline leaves, rosette leaves, stems and flowers, but not in roots.1 Publication

Gene expression databases

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q9LI74 baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q9LI74 AT

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGrid)

More...
BioGridi
7488, 1 interactor

STRING: functional protein association networks

More...
STRINGi
3702.AT3G25690.1

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

Protein Model Portal of the PSI-Nature Structural Biology Knowledgebase

More...
ProteinModelPortali
Q9LI74

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q9LI74

Database of comparative protein structure models

More...
ModBasei
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni1 – 25Required for chloroplast localizationAdd BLAST25
Regioni269 – 290Leucine-zipper 1Add BLAST22
Regioni802 – 823Leucine-zipper 2Add BLAST22

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and domains’ section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili123 – 341Sequence analysisAdd BLAST219

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi57 – 167Glu-richAdd BLAST111
Compositional biasi235 – 238Poly-Leu4
Compositional biasi410 – 479Ser-richAdd BLAST70
Compositional biasi648 – 705Pro-richAdd BLAST58
Compositional biasi989 – 998Asn-rich10

<p>This subsection of the ‘Family and domains’ section provides general information on the biological role of a domain. The term ‘domain’ is intended here in its wide acceptation, it may be a structural domain, a transmembrane region or a functional domain. Several domains are described in this subsection.<p><a href='/help/domain_cc' target='_top'>More...</a></p>Domaini

The N-terminal region (1-25) is necessary and sufficient for targeting and anchoring the protein in the chloroplast envelope membrane.
The coiled coil domain(123-341) interacts with the plasma membrane and anchors chloroplasts firmly on the plasma membrane.
The actin binding motif (346-356) can function in vitro as an actin binding site.
The proline-rich domain (648-705) mediates the interaction with profilin.

Keywords - Domaini

Coiled coil, Repeat

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

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eggNOGi
ENOG410IGMN Eukaryota
ENOG4111F63 LUCA

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000242560

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q9LI74

Database of Orthologous Groups

More...
OrthoDBi
EOG093603CL

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q9LI74

Family and domain databases

Integrated resource of protein families, domains and functional sites

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InterProi
View protein in InterPro
IPR040265 CHUP1-like

The PANTHER Classification System

More...
PANTHERi
PTHR31342 PTHR31342, 2 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 1 <p>This subsection of the ‘Sequence’ section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoform i produced by alternative splicing. AlignAdd to basket
Note: A number of isoforms are produced. According to EST sequences.

This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All

Isoform 1 (identifier: Q9LI74-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MFVRIGFVVA ASIAAVTVKR LNVKPSKPSK PSDNGEGGDK EQSVDPDYNL
60 70 80 90 100
NDKNLQEEEE EEEEEVKLIN SVINQTRGSF SDYLDDDILP EFEDLLSGEI
110 120 130 140 150
EYPLPDDDNN LEKAEKERKY EVEMAYNDGE LERLKQLVKE LEEREVKLEG
160 170 180 190 200
ELLEYYGLKE QESDIVELQR QLKIKTVEID MLNITINSLQ AERKKLQEEL
210 220 230 240 250
SQNGIVRKEL EVARNKIKEL QRQIQLDANQ TKGQLLLLKQ HVSSLQMKEE
260 270 280 290 300
EAMNKDTEVE RKLKAVQDLE VQVMELKRKN RELQHEKREL SIKLDSAEAR
310 320 330 340 350
IATLSNMTES DKVAKVREEV NNLKHNNEDL LKQVEGLQMN RFSEVEELVY
360 370 380 390 400
LRWVNACLRY ELRNYQTPAG KISARDLSKN LSPKSQAKAK RLMLEYAGSE
410 420 430 440 450
RGQGDTDLES NYSQPSSPGS DDFDNASMDS STSRFSSFSK KPGLIQKLKK
460 470 480 490 500
WGKSKDDSSV QSSPSRSFYG GSPGRLSSSM NKQRGPLESL MIRNAGESVA
510 520 530 540 550
ITTFGQVDQE SPGTPETPNL PRIRTQQQAS SPGEGLNSVA ASFHVMSKSV
560 570 580 590 600
DNVLDEKYPA YKDRHKLAVE REKHIKHKAD QARAERFGGN VALPPKLAQL
610 620 630 640 650
KEKRVVVPSV ITATGDQSNE SNESNEGKAS ENAATVTKMK LVDIEKRPPR
660 670 680 690 700
VPRPPPRSAG GGKSTNLPSA RPPLPGGGPP PPPPPPGGGP PPPPGGGPPP
710 720 730 740 750
PPPPPGALGR GAGGGNKVHR APELVEFYQS LMKRESKKEG APSLISSGTG
760 770 780 790 800
NSSAARNNMI GEIENRSTFL LAVKADVETQ GDFVQSLATE VRASSFTDIE
810 820 830 840 850
DLLAFVSWLD EELSFLVDER AVLKHFDWPE GKADALREAA FEYQDLMKLE
860 870 880 890 900
KQVTSFVDDP NLSCEPALKK MYKLLEKVEQ SVYALLRTRD MAISRYKEFG
910 920 930 940 950
IPVDWLSDTG VVGKIKLSSV QLAKKYMKRV AYELDSVSGS DKDPNREFLL
960 970 980 990 1000
LQGVRFAFRV HQFAGGFDAE SMKAFEELRS RAKTESGDNN NNNNNNSNEE

ESVN
Length:1,004
Mass (Da):111,912
Last modified:October 1, 2000 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i2D85F5C3E68AE8DA
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
F4JA42F4JA42_ARATH
Hydroxyproline-rich glycoprotein fa...
CHUP1 AtCHUP1, At3g25690
863Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A1I9LT48A0A1I9LT48_ARATH
Hydroxyproline-rich glycoprotein fa...
CHUP1 AtCHUP1, At3g25690
1,006Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AB087408 mRNA Translation: BAC55960.1
AP001313 Genomic DNA Translation: BAB03089.1
CP002686 Genomic DNA Translation: AEE77051.1
CP002686 Genomic DNA Translation: AEE77052.1
CP002686 Genomic DNA Translation: ANM65754.1
CP002686 Genomic DNA Translation: ANM65755.1

NCBI Reference Sequences

More...
RefSeqi
NP_001189974.1, NM_001203045.1 [Q9LI74-1]
NP_001327701.1, NM_001338763.1 [Q9LI74-1]
NP_001327702.1, NM_001338761.1 [Q9LI74-1]
NP_189197.2, NM_113468.5 [Q9LI74-1]

UniGene gene-oriented nucleotide sequence clusters

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UniGenei
At.27741

Genome annotation databases

Ensembl plant genome annotation project

More...
EnsemblPlantsi
AT3G25690.1; AT3G25690.1; AT3G25690 [Q9LI74-1]
AT3G25690.2; AT3G25690.2; AT3G25690 [Q9LI74-1]
AT3G25690.4; AT3G25690.4; AT3G25690 [Q9LI74-1]
AT3G25690.6; AT3G25690.6; AT3G25690 [Q9LI74-1]

Database of genes from NCBI RefSeq genomes

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GeneIDi
822157

Gramene; a comparative resource for plants

More...
Gramenei
AT3G25690.1; AT3G25690.1; AT3G25690 [Q9LI74-1]
AT3G25690.2; AT3G25690.2; AT3G25690 [Q9LI74-1]
AT3G25690.4; AT3G25690.4; AT3G25690 [Q9LI74-1]
AT3G25690.6; AT3G25690.6; AT3G25690 [Q9LI74-1]

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
ath:AT3G25690

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB087408 mRNA Translation: BAC55960.1
AP001313 Genomic DNA Translation: BAB03089.1
CP002686 Genomic DNA Translation: AEE77051.1
CP002686 Genomic DNA Translation: AEE77052.1
CP002686 Genomic DNA Translation: ANM65754.1
CP002686 Genomic DNA Translation: ANM65755.1
RefSeqiNP_001189974.1, NM_001203045.1 [Q9LI74-1]
NP_001327701.1, NM_001338763.1 [Q9LI74-1]
NP_001327702.1, NM_001338761.1 [Q9LI74-1]
NP_189197.2, NM_113468.5 [Q9LI74-1]
UniGeneiAt.27741

3D structure databases

ProteinModelPortaliQ9LI74
SMRiQ9LI74
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi7488, 1 interactor
STRINGi3702.AT3G25690.1

PTM databases

iPTMnetiQ9LI74

Proteomic databases

PaxDbiQ9LI74
PRIDEiQ9LI74

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT3G25690.1; AT3G25690.1; AT3G25690 [Q9LI74-1]
AT3G25690.2; AT3G25690.2; AT3G25690 [Q9LI74-1]
AT3G25690.4; AT3G25690.4; AT3G25690 [Q9LI74-1]
AT3G25690.6; AT3G25690.6; AT3G25690 [Q9LI74-1]
GeneIDi822157
GrameneiAT3G25690.1; AT3G25690.1; AT3G25690 [Q9LI74-1]
AT3G25690.2; AT3G25690.2; AT3G25690 [Q9LI74-1]
AT3G25690.4; AT3G25690.4; AT3G25690 [Q9LI74-1]
AT3G25690.6; AT3G25690.6; AT3G25690 [Q9LI74-1]
KEGGiath:AT3G25690

Organism-specific databases

AraportiAT3G25690
TAIRilocus:2102385 AT3G25690

Phylogenomic databases

eggNOGiENOG410IGMN Eukaryota
ENOG4111F63 LUCA
HOGENOMiHOG000242560
InParanoidiQ9LI74
OrthoDBiEOG093603CL
PhylomeDBiQ9LI74

Miscellaneous databases

Protein Ontology

More...
PROi
PR:Q9LI74

Gene expression databases

ExpressionAtlasiQ9LI74 baseline and differential
GenevisibleiQ9LI74 AT

Family and domain databases

InterProiView protein in InterPro
IPR040265 CHUP1-like
PANTHERiPTHR31342 PTHR31342, 2 hits

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiCHUP1_ARATH
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q9LI74
Secondary accession number(s): A0A1I9LT47
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 16, 2009
Last sequence update: October 1, 2000
Last modified: December 5, 2018
This is version 99 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
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