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Protein

ABC transporter B family member 15

Gene

ABCB15

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi394 – 401ATP 1PROSITE-ProRule annotation8
Nucleotide bindingi1030 – 1037ATP 2PROSITE-ProRule annotation8

GO - Molecular functioni

Keywordsi

Biological processTransport
LigandATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciARA:AT3G28345-MONOMER
ReactomeiR-ATH-159418 Recycling of bile acids and salts
R-ATH-193368 Synthesis of bile acids and bile salts via 7alpha-hydroxycholesterol
R-ATH-382556 ABC-family proteins mediated transport

Names & Taxonomyi

Protein namesi
Recommended name:
ABC transporter B family member 15
Short name:
ABC transporter ABCB.15
Short name:
AtABCB15
Alternative name(s):
Multidrug resistance protein 13
P-glycoprotein 15
Gene namesi
Name:ABCB15
Synonyms:MDR13, PGP15
Ordered Locus Names:At3g28345
ORF Names:MZF16.16
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 3

Organism-specific databases

AraportiAT3G28345
TAIRilocus:2088897 AT3G28345

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei35 – 55HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei82 – 102HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei158 – 180HelicalPROSITE-ProRule annotationAdd BLAST23
Transmembranei184 – 206HelicalPROSITE-ProRule annotationAdd BLAST23
Transmembranei264 – 284HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei296 – 316HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei681 – 701HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei714 – 734HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei794 – 813HelicalPROSITE-ProRule annotationAdd BLAST20
Transmembranei817 – 839HelicalPROSITE-ProRule annotationAdd BLAST23
Transmembranei895 – 915HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei923 – 943HelicalPROSITE-ProRule annotationAdd BLAST21

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002279241 – 1240ABC transporter B family member 15Add BLAST1240

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Glycosylationi542N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi605N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi622N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi646N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi769N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi1015N-linked (GlcNAc...) asparagineSequence analysis1

Keywords - PTMi

Glycoprotein

Proteomic databases

PaxDbiQ9LHD1
PRIDEiQ9LHD1

PTM databases

iPTMnetiQ9LHD1

Expressioni

Gene expression databases

ExpressionAtlasiQ9LHD1 baseline and differential
GenevisibleiQ9LHD1 AT

Interactioni

Protein-protein interaction databases

STRINGi3702.AT3G28345.1

Structurei

3D structure databases

ProteinModelPortaliQ9LHD1
SMRiQ9LHD1
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini35 – 324ABC transmembrane type-1 1PROSITE-ProRule annotationAdd BLAST290
Domaini359 – 595ABC transporter 1PROSITE-ProRule annotationAdd BLAST237
Domaini672 – 960ABC transmembrane type-1 2PROSITE-ProRule annotationAdd BLAST289
Domaini995 – 1233ABC transporter 2PROSITE-ProRule annotationAdd BLAST239

Sequence similaritiesi

Keywords - Domaini

Repeat, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG0055 Eukaryota
COG1132 LUCA
InParanoidiQ9LHD1
KOiK05658
OMAiKSTCIAM
OrthoDBiEOG093600PV
PhylomeDBiQ9LHD1

Family and domain databases

Gene3Di1.20.1560.10, 1 hit
InterProiView protein in InterPro
IPR003593 AAA+_ATPase
IPR011527 ABC1_TM_dom
IPR036640 ABC1_TM_sf
IPR003439 ABC_transporter-like
IPR017871 ABC_transporter_CS
IPR027417 P-loop_NTPase
PfamiView protein in Pfam
PF00664 ABC_membrane, 2 hits
PF00005 ABC_tran, 2 hits
SMARTiView protein in SMART
SM00382 AAA, 2 hits
SUPFAMiSSF52540 SSF52540, 2 hits
SSF90123 SSF90123, 2 hits
PROSITEiView protein in PROSITE
PS50929 ABC_TM1F, 2 hits
PS00211 ABC_TRANSPORTER_1, 2 hits
PS50893 ABC_TRANSPORTER_2, 2 hits

Sequencei

Sequence statusi: Complete.

Q9LHD1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGKEEEKESG RNKMNCFGSV RSIFMHADGV DWLLMGLGLI GAVGDGFTTP
60 70 80 90 100
LVLLITSKLM NNIGGSSFNT DTFMQSISKN SVALLYVACG SWVVCFLEGY
110 120 130 140 150
CWTRTGERQT ARMREKYLRA VLRQDVGYFD LHVTSTSDVI TSVSSDSFVI
160 170 180 190 200
QDVLSEKLPN FLMSASTFVG SYIVGFILLW RLAIVGLPFI VLLVIPGLMY
210 220 230 240 250
GRALISISRK IREEYNEAGF VAEQAISSVR TVYAFSGERK TISKFSTALQ
260 270 280 290 300
GSVKLGIKQG LAKGITIGSN GITFAMWGFM SWYGSRMVMY HGAQGGTVFA
310 320 330 340 350
VAAAIAIGGV SLGGGLSNLK YFFEAASVGE RIMEVINRVP KIDSDNPDGH
360 370 380 390 400
KLEKIRGEVE FKNVKFVYPS RLETSIFDDF CLRVPSGKTV ALVGGSGSGK
410 420 430 440 450
STVISLLQRF YDPLAGEILI DGVSIDKLQV KWLRSQMGLV SQEPALFATT
460 470 480 490 500
IKENILFGKE DASMDDVVEA AKASNAHNFI SQLPNGYETQ VGERGVQMSG
510 520 530 540 550
GQKQRIAIAR AIIKSPTILL LDEATSALDS ESERVVQEAL ENASIGRTTI
560 570 580 590 600
LIAHRLSTIR NADVISVVKN GHIVETGSHD ELMENIDGQY STLVHLQQIE
610 620 630 640 650
KQDINVSVKI GPISDPSKDI RNSSRVSTLS RSSSANSVTG PSTIKNLSED
660 670 680 690 700
NKPQLPSFKR LLAMNLPEWK QALYGCISAT LFGAIQPAYA YSLGSMVSVY
710 720 730 740 750
FLTSHDEIKE KTRIYALSFV GLAVLSFLIN ISQHYNFAYM GEYLTKRIRE
760 770 780 790 800
RMLSKVLTFE VGWFDRDENS SGAICSRLAK DANVVRSLVG DRMALVVQTV
810 820 830 840 850
SAVTIAFTMG LVIAWRLALV MIAVQPVIIV CFYTRRVLLK SMSKKAIKAQ
860 870 880 890 900
DESSKLAAEA VSNVRTITAF SSQERIMKML EKAQESPRRE SIRQSWFAGF
910 920 930 940 950
GLAMSQSLTS CTWALDFWYG GRLIQDGYIT AKALFETFMI LVSTGRVIAD
960 970 980 990 1000
AGSMTTDLAK GSDAVGSVFA VLDRYTSIDP EDPDGYETER ITGQVEFLDV
1010 1020 1030 1040 1050
DFSYPTRPDV IIFKNFSIKI EEGKSTAIVG PSGSGKSTII GLIERFYDPL
1060 1070 1080 1090 1100
KGIVKIDGRD IRSYHLRSLR RHIALVSQEP TLFAGTIREN IIYGGVSDKI
1110 1120 1130 1140 1150
DEAEIIEAAK AANAHDFITS LTEGYDTYCG DRGVQLSGGQ KQRIAIARAV
1160 1170 1180 1190 1200
LKNPSVLLLD EATSALDSQS ERVVQDALER VMVGRTSVVI AHRLSTIQNC
1210 1220 1230 1240
DAIAVLDKGK LVERGTHSSL LSKGPTGIYF SLVSLQTTSG
Length:1,240
Mass (Da):135,641
Last modified:October 1, 2000 - v1
Checksum:iF00F17EBD4709173
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP002051, AB026644 Genomic DNA Translation: BAB02627.1
CP002686 Genomic DNA Translation: AEE77436.1
RefSeqiNP_189475.1, NM_113754.3
UniGeneiAt.43730

Genome annotation databases

EnsemblPlantsiAT3G28345.1; AT3G28345.1; AT3G28345
GeneIDi822463
GrameneiAT3G28345.1; AT3G28345.1; AT3G28345
KEGGiath:AT3G28345

Similar proteinsi

Entry informationi

Entry nameiAB15B_ARATH
AccessioniPrimary (citable) accession number: Q9LHD1
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 21, 2006
Last sequence update: October 1, 2000
Last modified: May 23, 2018
This is version 132 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

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