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Protein

AAA-ATPase At3g28520

Gene

At3g28520

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + H2O = ADP + phosphate.By similarity

Cofactori

Mg2+By similarity

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi249 – 256ATPSequence analysis8

GO - Molecular functioni

Keywordsi

Molecular functionHydrolase
LigandATP-binding, Magnesium, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
AAA-ATPase At3g28520 (EC:3.6.1.3By similarity)
Gene namesi
Ordered Locus Names:At3g28520Imported
ORF Names:T20D4.3Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 3

Organism-specific databases

AraportiAT3G28520
TAIRilocus:2098638 AT3G28520

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei7 – 25HelicalSequence analysisAdd BLAST19

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00004347081 – 492AAA-ATPase At3g28520Add BLAST492

Proteomic databases

PaxDbiQ9LH83

Expressioni

Gene expression databases

ExpressionAtlasiQ9LH83 baseline and differential

Interactioni

Protein-protein interaction databases

STRINGi3702.AT3G28520.1

Structurei

3D structure databases

ProteinModelPortaliQ9LH83
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi459 – 492Lys-richPROSITE-ProRule annotationAdd BLAST34

Sequence similaritiesi

Belongs to the AAA ATPase family. BCS1 subfamily.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG0743 Eukaryota
COG0465 LUCA
HOGENOMiHOG000237995
OrthoDBiEOG09360FB5
PhylomeDBiQ9LH83

Family and domain databases

InterProiView protein in InterPro
IPR003593 AAA+_ATPase
IPR025753 AAA_N_dom
IPR003959 ATPase_AAA_core
IPR027417 P-loop_NTPase
PfamiView protein in Pfam
PF00004 AAA, 1 hit
PF14363 AAA_assoc, 1 hit
SMARTiView protein in SMART
SM00382 AAA, 1 hit
SUPFAMiSSF52540 SSF52540, 2 hits

Sequencei

Sequence statusi: Complete.

Q9LH83-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLEVGTIWGF TSTTMASIMF LWPMYKQFVP YQLREYLENT IQKYLDKLFR
60 70 80 90 100
RDSNFVYIRF PEYTGEGLSK SRAYDEIGNY LSSISTARAK RLKAKESENS
110 120 130 140 150
KSLVLCLDDD EAVVVVFQGV NVVWSSTVVD KEDKHNSKEG RYLTLTFENH
160 170 180 190 200
HRDIITNTYI DHVLREGKEI ALKNRERKLY TNNDSSSYSS WWEGLWSNVP
210 220 230 240 250
FNHHASFETL GMDLDKKEEI KKDLIKFTKG KDYYRKVAKP WKRGYLLFGP
260 270 280 290 300
PGTGKSTMIS AIANFLEYDV YDLELTTVKD NAELKKLMLD TKGKSIVVIE
310 320 330 340 350
DIDCSLELTE HRKKKKEEDE DKEEKKEAEN LKRVSGNNES NVTLSGLLNA
360 370 380 390 400
IDGLWSACSD EKIIIFTTNF VDNLDPALIR RGRMDYHIEM SYCRFEAFKV
410 420 430 440 450
LAKNYLENES HDLYGEIGRL LEEVDVSPAD VAENLMPKSD EDDADICFRR
460 470 480 490
LVKSLEEEKK KKIEKEARKN KKKAEDNVKQ EKQNKVKGMV TK
Length:492
Mass (Da):57,108
Last modified:October 1, 2000 - v1
Checksum:i0462D03131D93589
GO

Sequence cautioni

The sequence AEE77455 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP002059 Genomic DNA Translation: BAB01954.1
CP002686 Genomic DNA Translation: AEE77455.1 Different initiation.
RefSeqiNP_189493.1, NM_113772.1
UniGeneiAt.53541

Genome annotation databases

EnsemblPlantsiAT3G28520.1; AT3G28520.1; AT3G28520
GeneIDi822482
GrameneiAT3G28520.1; AT3G28520.1; AT3G28520
KEGGiath:AT3G28520

Similar proteinsi

Entry informationi

Entry nameiAATP6_ARATH
AccessioniPrimary (citable) accession number: Q9LH83
Secondary accession number(s): F4J0B1
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 11, 2015
Last sequence update: October 1, 2000
Last modified: April 25, 2018
This is version 105 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

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