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Entry version 88 (05 Jun 2019)
Sequence version 1 (01 Oct 2000)
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Protein
Submitted name:

Glucodextranase

Gene

g1d

Organism
Arthrobacter globiformis
Status
Unreviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section indicates at which position the protein binds a given metal ion. The nature of the metal is indicated in the ‘Description’ field.<p><a href='/help/metal' target='_top'>More...</a></p>Metal bindingi164Calcium 1Combined sources1
Metal bindingi165Calcium 1; via carbonyl oxygenCombined sources1
Metal bindingi167Calcium 2; via carbonyl oxygenCombined sources1
Metal bindingi170Calcium 2Combined sources1
Metal bindingi172Calcium 2; via carbonyl oxygenCombined sources1
Metal bindingi174Calcium 2Combined sources1
Metal bindingi187Calcium 2Combined sources1
Metal bindingi239Calcium 1Combined sources1
Metal bindingi240Calcium 1; via carbonyl oxygenCombined sources1
Metal bindingi386Calcium 3; via carbonyl oxygenCombined sources1
Metal bindingi390Calcium 3Combined sources1
Metal bindingi437Calcium 3Combined sources1
Metal bindingi810Calcium 4Combined sources1
Metal bindingi810Calcium 5Combined sources1
Metal bindingi811Calcium 4; via carbonyl oxygenCombined sources1
Metal bindingi814Calcium 4Combined sources1
Metal bindingi814Calcium 5Combined sources1
Metal bindingi835Calcium 4Combined sources1
Metal bindingi836Calcium 4; via carbonyl oxygenCombined sources1
Metal bindingi997Calcium 6; via carbonyl oxygenCombined sources1
Metal bindingi1008Calcium 6Combined sources1
Metal bindingi1010Calcium 6; via carbonyl oxygenCombined sources1
Metal bindingi1013Calcium 6Combined sources1
Metal bindingi1018Calcium 4Combined sources1
Metal bindingi1019Calcium 5; via carbonyl oxygenCombined sources1
Metal bindingi1027Calcium 5Combined sources1

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

LigandCalciumCombined sources, Metal-bindingCombined sources

Enzyme and pathway databases

BRENDA Comprehensive Enzyme Information System

More...
BRENDAi
3.2.1.70 444

Protein family/group databases

Carbohydrate-Active enZymes

More...
CAZyi
GH15 Glycoside Hydrolase Family 15

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
GlucodextranaseImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:g1dImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiArthrobacter globiformisImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri1665 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaActinobacteriaMicrococcalesMicrococcaceaeArthrobacter

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section denotes the presence of an N-terminal signal peptide.<p><a href='/help/signal' target='_top'>More...</a></p>Signal peptidei1 – 28Sequence analysisAdd BLAST28
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_500432954129 – 1048Sequence analysisAdd BLAST1020

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q9LBQ9

Database of comparative protein structure models

More...
ModBasei
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

Miscellaneous databases

Relative evolutionary importance of amino acids within a protein sequence

More...
EvolutionaryTracei
Q9LBQ9

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini34 – 296Glucodextran_NInterPro annotationAdd BLAST263
Domaini317 – 651Glyco_hydro_15InterPro annotationAdd BLAST335
Domaini720 – 803Glucodextran_BInterPro annotationAdd BLAST84
Domaini806 – 1033Glucodextran_CInterPro annotationAdd BLAST228

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni28 – 52DisorderedSequence analysisAdd BLAST25

Keywords - Domaini

SignalSequence analysis

Family and domain databases

Conserved Domains Database

More...
CDDi
cd07430 GH15_N, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
1.50.10.10, 1 hit
2.60.40.10, 1 hit
2.70.98.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR008928 6-hairpin_glycosidase_sf
IPR012341 6hp_glycosidase-like_sf
IPR011013 Gal_mutarotase_sf_dom
IPR014718 GH-type_carb-bd
IPR011613 GH15-like
IPR000165 Glucoamylase
IPR006425 Glucoamylase_bac
IPR015219 Glucodextran_B
IPR019248 Glucodextran_C
IPR015220 Glucodextranase_N
IPR013783 Ig-like_fold
IPR014756 Ig_E-set

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF09136 Glucodextran_B, 1 hit
PF09985 Glucodextran_C, 1 hit
PF09137 Glucodextran_N, 1 hit
PF00723 Glyco_hydro_15, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF48208 SSF48208, 1 hit
SSF74650 SSF74650, 1 hit
SSF81296 SSF81296, 1 hit

TIGRFAMs; a protein family database

More...
TIGRFAMsi
TIGR01535 glucan_glucosid, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS00820 GLUCOAMYLASE, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q9LBQ9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKQRLKSACS ATALAVAVSA LGLSPAVAET AEPPGSPGAA ATWTKGDKEG
60 70 80 90 100
VGTSLNPASK VWYTLTEGTM SEVYYPHADT PNTRELQFAV SDGTSAQRES
110 120 130 140 150
EQTTRTVELA DPKALSYRQT TTDNAGRWRL TKTYVTDPRR STVMLGVTFE
160 170 180 190 200
VLDGGDYQLF VLSDPSLAGT SGGDTGSVTD GALLASDLAD AATPVATALV
210 220 230 240 250
SSVGFGAVAN GYVGTSDGWT DLAADGRLDN ASATAGPGNI SQTGQIPLAA
260 270 280 290 300
GGKTEFSLAL GFGADTAEAL ATAKASLGTG YKKVSKSYTG EWKKYLNSLD
310 320 330 340 350
APATSLTGAL RTQYDVSLMT VKSHEDKTFP GAFIASLTIP WGQAASAETH
360 370 380 390 400
REGYHAVWAR DMYQSVTALL AAGDEEAAAR GVEWLFTYQQ QPDGHFPQTS
410 420 430 440 450
RVDGTIGQNG IQLDETAFPI LLANQIGRTD AGFYRNELKP AADYLVAAGP
460 470 480 490 500
KTPQERWEET GGYSTSTLAS QIAALAAAAD IAGKNGDAGS AAVYRATADE
510 520 530 540 550
WQRSTEKWMF TTNGPVGDGK YYLRISATGN PNDGATRDWG NGAGVHPENA
560 570 580 590 600
VLDGGFLEFV RLGVKAPADP YVADSLAETD ASISQETPGG RMWHRYTYDG
610 620 630 640 650
YGEKADGSPW DGTGIGRLWP LLSGERGEYA LANGQDALPY LETMHSAANA
660 670 680 690 700
GYMIPEQVWD RDEPTSYGHE LGRSTGSASP LSWAMAQYVR LAAGVKAGAP
710 720 730 740 750
VETPQNVAAR YAAGTPLSSP ELSVTAPEAL STADSATAVV RGTTNAAKVY
760 770 780 790 800
VSVNGTATEA PVTDGTFSLD VALTGAKNKV TVAAVAADGG TAVEDRTVLY
810 820 830 840 850
YGSRIGALSD PAGDDNGPGT YRYPTNSAYV PGAFDLTGVD VYDAGDDYAF
860 870 880 890 900
VATIAGEVTN PWGGQAISHQ RVNIYLGKGE GGATPGLPGT NINLEHAWDS
910 920 930 940 950
VIVTDGRFDG AGVYAPDGTR TSAVSLLAVP EARQIVTRVP KAALGGLDPA
960 970 980 990 1000
TARMSVAMFG NAESGEGIGN VRPVYDGAYW EAGDPAWIKE WRFGGGAGVF
1010 1020 1030 1040
DGTIPSRDTD TDDPNALDVL VGEGQTQAAV LDWRAGSPVV VPMLGLQP
Length:1,048
Mass (Da):109,141
Last modified:October 1, 2000 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i09D4D124B478DF4F
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AB033333 Genomic DNA Translation: BAB20416.1

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB033333 Genomic DNA Translation: BAB20416.1

3D structure databases

Select the link destinations:

Protein Data Bank Europe

More...
PDBei

Protein Data Bank RCSB

More...
RCSB PDBi

Protein Data Bank Japan

More...
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1UG9X-ray2.50A29-1048[»]
1ULVX-ray2.42A29-1048[»]
SMRiQ9LBQ9
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiGH15 Glycoside Hydrolase Family 15

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Enzyme and pathway databases

BRENDAi3.2.1.70 444

Miscellaneous databases

EvolutionaryTraceiQ9LBQ9

Family and domain databases

CDDicd07430 GH15_N, 1 hit
Gene3Di1.50.10.10, 1 hit
2.60.40.10, 1 hit
2.70.98.10, 1 hit
InterProiView protein in InterPro
IPR008928 6-hairpin_glycosidase_sf
IPR012341 6hp_glycosidase-like_sf
IPR011013 Gal_mutarotase_sf_dom
IPR014718 GH-type_carb-bd
IPR011613 GH15-like
IPR000165 Glucoamylase
IPR006425 Glucoamylase_bac
IPR015219 Glucodextran_B
IPR019248 Glucodextran_C
IPR015220 Glucodextranase_N
IPR013783 Ig-like_fold
IPR014756 Ig_E-set
PfamiView protein in Pfam
PF09136 Glucodextran_B, 1 hit
PF09985 Glucodextran_C, 1 hit
PF09137 Glucodextran_N, 1 hit
PF00723 Glyco_hydro_15, 1 hit
SUPFAMiSSF48208 SSF48208, 1 hit
SSF74650 SSF74650, 1 hit
SSF81296 SSF81296, 1 hit
TIGRFAMsiTIGR01535 glucan_glucosid, 1 hit
PROSITEiView protein in PROSITE
PS00820 GLUCOAMYLASE, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiQ9LBQ9_ARTGO
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q9LBQ9
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: June 5, 2019
This is version 88 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources
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