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UniProtKB - Q9L2C3 (Q9L2C3_STRCO)

Entry version 83 (07 Apr 2021)
Sequence version 1 (01 Oct 2000)
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Protein
Submitted name:

Large Ala/Glu-rich protein

Gene

SCO5397

Organism
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Large Ala/Glu-rich proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Ordered Locus Names:SCO5397Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri100226 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteria › Actinobacteria › Streptomycetales › Streptomycetaceae › Streptomyces › Streptomyces albidoflavus group ›
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000001973 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...STRINGi		100226.SCO5397

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...eggNOGi		COG3064, Bacteria

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...HOGENOMi		CLU_258920_0_0_11

InParanoid: Eukaryotic Ortholog Groups

More...InParanoidi		Q9L2C3

Identification of Orthologs from Complete Genome Data

More...OMAi		DKCDAYE

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q9L2C3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MRGYESQERE PAADVDHLSR FEAEMKRLKT EREKAIQHAE DLGYQVEVLR 
        60         70         80         90        100
AKLHEARRTI MSRPAFDGGD IGYQAEQLLR NAQTQADQLR ADAERELSQA 
       110        120        130        140        150
RAQTQRILQE HAEQAARLQA ELHQEAVTRR QQLDQELAER RQTVESHVNE 
       160        170        180        190        200
NVAWAEQLRA RTEQQARRLL DESRAEAEQA MAAARAEAER LTAEARQRLR 
       210        220        230        240        250
SDAESARAEA DQILRRARTD AERLLNAAST QAQEATDHAE QLRSSTASES 
       260        270        280        290        300
ESTRREVQEL SRAAEQRMSE AEEALRKAQA EAEKVVAQAE EAAAKALSSA 
       310        320        330        340        350
EATNEQRTRT AKEQVARLVG EATKDAESTR SEAEQVVADA RAEAERIVAE 
       360        370        380        390        400
AAEKARTITA EESATQLSKA AKTAEDVLNK ASEDAKRTTK AATEEAERIR 
       410        420        430        440        450
TEAEAEADRL RAEAHDIAAE LKGAAKDDTK EYRAKTVELQ EEARRLRGEA 
       460        470        480        490        500
EQLRADAVAE GEKIRAEARK EAVAQIEEAA KTAEELLAKA KADADELRQT 
       510        520        530        540        550
ATADGEKVRA EAIERATTLR RQAEETLERT RAEAERHRAE AAERVEELQA 
       560        570        580        590        600
EAERAARELR EETERAVEAR QAEAAEELTR LHTEAEERRS AAEEALSGAR 
       610        620        630        640        650
EEGERIRREA AEESERLRTE AAERVRTLQQ QAETEAERLR TEAAADASAS 
       660        670        680        690        700
RAEGEAVAVR LRSEASNEAE RLKTEAQESA DRVRAEAQTA AERIAAEASE 
       710        720        730        740        750
ALAAAQEEAA RRRREAEELL GSARQEADQE RERVREQSEE LLASARNRVE 
       760        770        780        790        800
EAQAEAVRLV EEADRRATEM VSAAEQHAAQ VRESVAGLHE QAQEEITGLR 
       810        820        830        840        850
SAAEHAAERT RTEAQEEADR VRADAYAERE RASEDAGRLR REAQEETEAA 
       860        870        880        890        900
KALAERTVSE AITEADRIRS DVSEHAQRVR TEASDAIAEA EQSASRTRAD 
       910        920        930        940        950
AREDANRIRS DAATQADTLI TEARSEAERL TTETAAETDR IRTQTLAEAE 
       960        970        980        990       1000
RVTAEAASES ERVRTEAATE AERLRTETIA EADRVRAEAG ARAEQLVSDA 
      1010       1020       1030       1040       1050
TGEAERLRAE AADTVGSAQQ HAERLRTEAD RVRREAAAEA ERVTTAAREE 
      1060       1070       1080       1090       1100
AERTLDEARK DANKRRSEAA EQVDTLITET AAEADKLLTE AQQQAQKTTA 
      1110       1120       1130       1140       1150
DAESQADTMV GAARSEADRI VQEATVEGNT RVEKARTDAD ELLVGARRDA 
      1160       1170       1180       1190       1200
TAIRERAEEL RERLTSEIEE LHERARREAA ETMKSAGDRC DALIKAAEEQ 
      1210       1220       1230       1240       1250
LAKAEAKAKE LVSEANSEAG KVRIAAVKKA EGLLKEAEQK KATLVREAEE 
      1260       1270       1280       1290       1300
LKAEAVREAR ATVDEGKREL EVLVRRREDI NAEISRVQDV LEALESFEAP 
      1310       1320 
GGAKDNGVKA GATVGAPRSG GKSSDG
Length:1,326
Mass (Da):146,435
Last modified:October 1, 2000 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i9C0DCB984863FA38
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
AL939123 Genomic DNA Translation: CAB70627.1

NCBI Reference Sequences

More...RefSeqi		NP_629536.1, NC_003888.3
WP_011030220.1, NZ_VNID01000011.1

Genome annotation databases

Database of genes from NCBI RefSeq genomes

More...GeneIDi		1100837

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		sco:SCO5397

Pathosystems Resource Integration Center (PATRIC)

More...PATRICi		fig|100226.15.peg.5479

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939123 Genomic DNA Translation: CAB70627.1
RefSeqiNP_629536.1, NC_003888.3
WP_011030220.1, NZ_VNID01000011.1

3D structure databases

Database of comparative protein structure models

More...ModBasei		Search...

SWISS-MODEL Interactive Workspace

More...SWISS-MODEL-Workspacei		Submit a new modelling project...

Protein-protein interaction databases

STRINGi100226.SCO5397

Genome annotation databases

GeneIDi1100837
KEGGisco:SCO5397
PATRICifig|100226.15.peg.5479

Phylogenomic databases

eggNOGiCOG3064, Bacteria
HOGENOMiCLU_258920_0_0_11
InParanoidiQ9L2C3
OMAiDKCDAYE

Family and domain databases

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiQ9L2C3_STRCO
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q9L2C3
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: October 1, 2000
Last sequence update: October 1, 2000
Last modified: April 7, 2021
This is version 83 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Technical termi

Reference proteomeImported
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