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Entry version 119 (08 May 2019)
Sequence version 1 (01 Mar 2001)
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Protein
Submitted name:

SDS hydrolase SdsA1

Gene

sdsA1

Organism
Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Status
Unreviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section indicates at which position the protein binds a given metal ion. The nature of the metal is indicated in the ‘Description’ field.<p><a href='/help/metal' target='_top'>More...</a></p>Metal bindingi169Zinc 1; via tele nitrogenCombined sources1
Metal bindingi169Zinc 2; via tele nitrogenCombined sources1
Metal bindingi171Zinc 1; via pros nitrogenCombined sources1
Metal bindingi171Zinc 2; via pros nitrogenCombined sources1
Metal bindingi171Zinc 3; via pros nitrogenCombined sources1
Metal bindingi173Zinc 4Combined sources1
Metal bindingi174Zinc 4; via tele nitrogenCombined sources1
Metal bindingi280Zinc 1Combined sources1
Metal bindingi280Zinc 3Combined sources1
Metal bindingi280Zinc 5Combined sources1
Metal bindingi299Zinc 2Combined sources1
Metal bindingi299Zinc 3Combined sources1
Metal bindingi299Zinc 4Combined sources1
Metal bindingi299Zinc 5Combined sources1
Metal bindingi344Zinc 4; via tele nitrogenCombined sources1

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionHydrolaseImported
LigandMetal-bindingCombined sources, ZincCombined sources

Enzyme and pathway databases

BioCyc Collection of Pathway/Genome Databases

More...
BioCyci
PAER208964:G1FZ6-753-MONOMER

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
SDS hydrolase SdsA1Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:sdsA1Imported
Ordered Locus Names:PA0740Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiPseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri208964 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000002438 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome

Organism-specific databases

Pseudomonas genome database

More...
PseudoCAPi
PA0740

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

GO - Cellular componenti

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

Chemistry databases

Drug and drug target database

More...
DrugBanki
DB06893 1-DECANE-SULFONIC-ACID
DB06894 1-DODECANOL

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section denotes the presence of an N-terminal signal peptide.<p><a href='/help/signal' target='_top'>More...</a></p>Signal peptidei1 – 17Sequence analysisAdd BLAST17
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_500432850918 – 658Sequence analysisAdd BLAST641

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q9I5I9

PRoteomics IDEntifications database

More...
PRIDEi
Q9I5I9

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the '<a href="http://www.uniprot.org/help/interaction_section%27">Interaction</a> section provides information about binary protein-protein interactions. The data presented in this section are a quality-filtered subset of binary interactions automatically derived from the <a href="http://www.ebi.ac.uk/intact/">IntAct database</a>. It is updated on a monthly basis. Each binary interaction is displayed on a separate line.<p><a href='/help/binary_interactions' target='_top'>More...</a></p>Binary interactionsi

WithEntry#Exp.IntActNotes
itself7EBI-11666189,EBI-11666189

GO - Molecular functioni

Protein-protein interaction databases

Database of interacting proteins

More...
DIPi
DIP-61164N

Molecular INTeraction database

More...
MINTi
Q9I5I9

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q9I5I9

Database of comparative protein structure models

More...
ModBasei
Search...

Protein Data Bank in Europe - Knowledge Base

More...
PDBe-KBi
Search...

Miscellaneous databases

Relative evolutionary importance of amino acids within a protein sequence

More...
EvolutionaryTracei
Q9I5I9

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini122 – 344Lactamase_BInterPro annotationAdd BLAST223

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG4105EUZ Bacteria
COG2015 LUCA

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q9I5I9

Identification of Orthologs from Complete Genome Data

More...
OMAi
AENCTHN

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q9I5I9

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
1.25.40.880, 1 hit
3.30.1050.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR038536 Alkyl/aryl-sulf_dimr_sf
IPR029229 Alkyl_sulf_C
IPR029228 Alkyl_sulf_dimr
IPR001279 Metallo-B-lactamas
IPR036866 RibonucZ/Hydroxyglut_hydro
IPR036527 SCP2_sterol-bd_dom_sf

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF14864 Alkyl_sulf_C, 1 hit
PF14863 Alkyl_sulf_dimr, 1 hit
PF00753 Lactamase_B, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00849 Lactamase_B, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF55718 SSF55718, 1 hit
SSF56281 SSF56281, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q9I5I9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSRLLALLAL APLLAGAAET TAPKPPSAFT VEAQRRVEAE LPFADRADFE
60 70 80 90 100
RADRGLIRRP ERLLIRNPDG SVAWQLGGYD FLLDGKPRDS INPSLQRQAL
110 120 130 140 150
LNLKYGLFEV AEGIYQVRGF DLANITFIRG DSGWIVVDTL TTPATARAAY
160 170 180 190 200
ELVSRELGER PIRTVIYSHA HADHFGGVRG LVEPQQVASG AVQIIAPAGF
210 220 230 240 250
MEAAIKENVL AGNAMMRRAT YQYGTQLPKG PQGQVDMAIG KGLARGPLSL
260 270 280 290 300
LAPTRLIEGE GEDLVLDGVP FTFQNTPGTE SPAEMNIWLP RQKALLMAEN
310 320 330 340 350
VVGTLHNLYT LRGAEVRDAL GWSKYINQAL HRFGRQAEVM FAVHNWPRWG
360 370 380 390 400
NAEIVEVLEK QRDLYGYLHD QTLHLANQGV TIGQVHNRLR LPPSLDQEWY
410 420 430 440 450
DRGYHGSVSH NARAVLNRYL GYYDGNPATL DPLSPEDSAG RYVEYMGGAE
460 470 480 490 500
RLLEQARASY ARGEYRWVVE VVNRLVFAEP DNRAARELQA DALEQLGYQA
510 520 530 540 550
ENAGWRNSYL SAAYELRHGV PRDQPTMKAG SADALAAMDT GLLFDYLGVR
560 570 580 590 600
LDAGAAEGKA LSINLRLPDI GENYLLELKN SHLNNLRGVQ SEDAGQTVSI
610 620 630 640 650
DRADLNRLLL KEVSAVRLVF EGKLKSSGNP LLLGQLFGML GDFDFWFDIV

TPAAKSEG
Length:658
Mass (Da):72,592
Last modified:March 1, 2001 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i3D29B5D2B0A2A84F
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AE004091 Genomic DNA Translation: AAG04129.1

Protein sequence database of the Protein Information Resource

More...
PIRi
G83552

NCBI Reference Sequences

More...
RefSeqi
NP_249431.1, NC_002516.2
WP_003114166.1, NZ_QZGE01000007.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...
EnsemblBacteriai
AAG04129; AAG04129; PA0740

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
882069

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
pae:PA0740

Pathosystems Resource Integration Center (PATRIC)

More...
PATRICi
fig|208964.12.peg.769

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE004091 Genomic DNA Translation: AAG04129.1
PIRiG83552
RefSeqiNP_249431.1, NC_002516.2
WP_003114166.1, NZ_QZGE01000007.1

3D structure databases

Select the link destinations:

Protein Data Bank Europe

More...
PDBei

Protein Data Bank RCSB

More...
RCSB PDBi

Protein Data Bank Japan

More...
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2CFUX-ray1.90A1-658[»]
2CFZX-ray2.05A1-658[»]
2CG2X-ray2.10A1-658[»]
2CG3X-ray2.60A1-658[»]
5A23X-ray2.41A/B/C/D1-658[»]
5AIJX-ray1.95A1-658[»]
5AJLX-ray3.45A/B1-658[»]
SMRiQ9I5I9
ModBaseiSearch...
PDBe-KBiSearch...

Protein-protein interaction databases

DIPiDIP-61164N
MINTiQ9I5I9

Chemistry databases

DrugBankiDB06893 1-DECANE-SULFONIC-ACID
DB06894 1-DODECANOL

Proteomic databases

PaxDbiQ9I5I9
PRIDEiQ9I5I9

Genome annotation databases

EnsemblBacteriaiAAG04129; AAG04129; PA0740
GeneIDi882069
KEGGipae:PA0740
PATRICifig|208964.12.peg.769

Organism-specific databases

PseudoCAPiPA0740

Phylogenomic databases

eggNOGiENOG4105EUZ Bacteria
COG2015 LUCA
InParanoidiQ9I5I9
OMAiAENCTHN
PhylomeDBiQ9I5I9

Enzyme and pathway databases

BioCyciPAER208964:G1FZ6-753-MONOMER

Miscellaneous databases

EvolutionaryTraceiQ9I5I9

Family and domain databases

Gene3Di1.25.40.880, 1 hit
3.30.1050.10, 1 hit
InterProiView protein in InterPro
IPR038536 Alkyl/aryl-sulf_dimr_sf
IPR029229 Alkyl_sulf_C
IPR029228 Alkyl_sulf_dimr
IPR001279 Metallo-B-lactamas
IPR036866 RibonucZ/Hydroxyglut_hydro
IPR036527 SCP2_sterol-bd_dom_sf
PfamiView protein in Pfam
PF14864 Alkyl_sulf_C, 1 hit
PF14863 Alkyl_sulf_dimr, 1 hit
PF00753 Lactamase_B, 1 hit
SMARTiView protein in SMART
SM00849 Lactamase_B, 1 hit
SUPFAMiSSF55718 SSF55718, 1 hit
SSF56281 SSF56281, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiQ9I5I9_PSEAE
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q9I5I9
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: May 8, 2019
This is version 119 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported
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