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UniProtKB - Q9H9A7 (RMI1_HUMAN)

Protein

RecQ-mediated genome instability protein 1

Gene

RMI1

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Essential component of the RMI complex, a complex that plays an important role in the processing of homologous recombination intermediates to limit DNA crossover formation in cells. Promotes TOP3A binding to double Holliday junctions (DHJ) and hence stimulates TOP3A-mediated dissolution. Required for BLM phosphorylation during mitosis. Within the BLM complex, required for BLM and TOP3A stability.3 Publications

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

View the complete GO annotation on QuickGO ...

GO - Biological processi

View the complete GO annotation on QuickGO ...

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Biological processDNA replication

Enzyme and pathway databases

Reactome - a knowledgebase of biological pathways and processes

More...Reactomei		R-HSA-5685938 HDR through Single Strand Annealing (SSA)
R-HSA-5685942 HDR through Homologous Recombination (HRR)
R-HSA-5693554 Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)
R-HSA-5693568 Resolution of D-loop Structures through Holliday Junction Intermediates
R-HSA-5693579 Homologous DNA Pairing and Strand Exchange
R-HSA-5693607 Processing of DNA double-strand break ends
R-HSA-5693616 Presynaptic phase of homologous DNA pairing and strand exchange
R-HSA-6804756 Regulation of TP53 Activity through Phosphorylation
R-HSA-69473 G2/M DNA damage checkpoint

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
RecQ-mediated genome instability protein 1
Alternative name(s):
BLM-associated protein of 75 kDa
Short name:
BLAP75
FAAP75
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:RMI1
Synonyms:C9orf76
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiHomo sapiens (Human)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri9606 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000005640 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 9

Organism-specific databases

Eukaryotic Pathogen Database Resources

More...EuPathDBi		HostDB:ENSG00000178966.15

Human Gene Nomenclature Database

More...HGNCi		HGNC:25764 RMI1

Online Mendelian Inheritance in Man (OMIM)

More...MIMi		610404 gene

neXtProt; the human protein knowledge platform

More...neXtProti		NX_Q9H9A7

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

Organism-specific databases

DisGeNET

More...DisGeNETi		80010

Open Targets

More...OpenTargetsi		ENSG00000178966

The Pharmacogenetics and Pharmacogenomics Knowledge Base

More...PharmGKBi		PA134939007

Polymorphism and mutation databases

BioMuta curated single-nucleotide variation and disease association database

More...BioMutai		RMI1

Domain mapping of disease mutations (DMDM)

More...DMDMi		322510109

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00002275461 – 625RecQ-mediated genome instability protein 1Add BLAST625

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei1N-acetylmethionineCombined sources1
Modified residuei225PhosphoserineCombined sources1
Modified residuei284PhosphoserineCombined sources1
Modified residuei292PhosphoserineCombined sources1
<p>This subsection of the <a href="http://www.uniprot.org/help/ptm_processing_section">PTM / Processing</a> section describes <strong>covalent linkages</strong> of various types formed <strong>between two proteins (interchain cross-links)</strong> or <strong>between two parts of the same protein (intrachain cross-links)</strong>, except the disulfide bonds that are annotated in the <a href="http://www.uniprot.org/manual/disulfid">'Disulfide bond'</a> subsection.<p><a href='/help/crosslnk' target='_top'>More...</a></p>Cross-linki334Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)Combined sources
Cross-linki387Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)Combined sources
Cross-linki426Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)Combined sources

Keywords - PTMi

Acetylation, Isopeptide bond, Phosphoprotein, Ubl conjugation

Proteomic databases

Encyclopedia of Proteome Dynamics

More...EPDi		Q9H9A7

jPOST - Japan Proteome Standard Repository/Database

More...jPOSTi		Q9H9A7

MaxQB - The MaxQuant DataBase

More...MaxQBi		Q9H9A7

PaxDb, a database of protein abundance averages across all three domains of life

More...PaxDbi		Q9H9A7

PeptideAtlas

More...PeptideAtlasi		Q9H9A7

PRoteomics IDEntifications database

More...PRIDEi		Q9H9A7

ProteomicsDB human proteome resource

More...ProteomicsDBi		81306

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...iPTMneti		Q9H9A7

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...PhosphoSitePlusi		Q9H9A7

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...Bgeei		ENSG00000178966 Expressed in 205 organ(s), highest expression level in oocyte

CleanEx database of gene expression profiles

More...CleanExi		HS_RMI1

ExpressionAtlas, Differential and Baseline Expression

More...ExpressionAtlasi		Q9H9A7 baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...Genevisiblei		Q9H9A7 HS

Organism-specific databases

Human Protein Atlas

More...HPAi		HPA021661

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Component of the RMI complex, containing at least TOP3A, RMI1 and RMI2. The RMI complex interacts with BLM. Directly interacts with RMI2 and TOP3A. May bind DHJ. Interacts (via N-terminal region) with BLM; the interaction is direct.6 Publications

<p>This subsection of the '<a href="http://www.uniprot.org/help/interaction_section%27">Interaction</a> section provides information about binary protein-protein interactions. The data presented in this section are a quality-filtered subset of binary interactions automatically derived from the <a href="http://www.ebi.ac.uk/intact/">IntAct database</a>. It is updated on a monthly basis. Each binary interaction is displayed on a separate line.<p><a href='/help/binary_interactions' target='_top'>More...</a></p>Binary interactionsi

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGrid)

More...BioGridi		123066, 27 interactors

ComplexPortal: manually curated resource of macromolecular complexes

More...ComplexPortali		CPX-3301 BTR double Holliday Junction dissolution complex

CORUM comprehensive resource of mammalian protein complexes

More...CORUMi		Q9H9A7

Database of interacting proteins

More...DIPi		DIP-33324N

Protein interaction database and analysis system

More...IntActi		Q9H9A7, 18 interactors

Molecular INTeraction database

More...MINTi		Q9H9A7

STRING: functional protein association networks

More...STRINGi		9606.ENSP00000317039

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

Secondary structure

1625
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details

3D structure databases

Select the link destinations:

Protein Data Bank Europe

More...PDBei

Protein Data Bank RCSB

More...RCSB PDBi

Protein Data Bank Japan

More...PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3MXNX-ray1.55A473-625[»]
3NBHX-ray2.00A475-625[»]
3NBIX-ray2.00A2-213[»]
4CGYX-ray2.85B1-219[»]
4CHTX-ray3.25B1-219[»]
4DAYX-ray3.30A473-625[»]

Protein Model Portal of the PSI-Nature Structural Biology Knowledgebase

More...ProteinModelPortali		Q9H9A7

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...SMRi		Q9H9A7

Database of comparative protein structure models

More...ModBasei		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the RMI1 family.Curated

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...eggNOGi		ENOG410INNR Eukaryota
ENOG410Z65I LUCA

Ensembl GeneTree

More...GeneTreei		ENSGT00940000161055

The HOVERGEN Database of Homologous Vertebrate Genes

More...HOVERGENi		HBG061190

InParanoid: Eukaryotic Ortholog Groups

More...InParanoidi		Q9H9A7

KEGG Orthology (KO)

More...KOi		K10990

Identification of Orthologs from Complete Genome Data

More...OMAi		QGMEYQS

Database of Orthologous Groups

More...OrthoDBi		531291at2759

Database for complete collections of gene phylogenies

More...PhylomeDBi		Q9H9A7

TreeFam database of animal gene trees

More...TreeFami		TF316491

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR033472 DUF1767
IPR039215 RMI1
IPR032199 RMI1_C
IPR013894 RMI1_N

The PANTHER Classification System

More...PANTHERi		PTHR14790 PTHR14790, 1 hit

Pfam protein domain database

More...Pfami		View protein in Pfam
PF16099 RMI1_C, 1 hit
PF08585 RMI1_N, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...SMARTi		View protein in SMART
SM01161 DUF1767, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

Q9H9A7-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MNVTSIALRA ETWLLAAWHV KVPPMWLEAC INWIQEENNN VNLSQAQMNK 
        60         70         80         90        100
QVFEQWLLTD LRDLEHPLLP DGILEIPKGE LNGFYALQIN SLVDVSQPAY 
       110        120        130        140        150
SQIQKLRGKN TTNDLVTAEA QVTPKPWEAK PSRMLMLQLT DGIVQIQGME 
       160        170        180        190        200
YQPIPILHSD LPPGTKILIY GNISFRLGVL LLKPENVKVL GGEVDALLEE 
       210        220        230        240        250
YAQEKVLARL IGEPDLVVSV IPNNSNENIP RVTDVLDPAL GPSDEELLAS 
       260        270        280        290        300
LDENDELTAN NDTSSERCFT TGSSSNTIPT RQSSFEPEFV ISPRPKEEPS 
       310        320        330        340        350
NLSIHVMDGE LDDFSLEEAL LLEETVQKEQ METKELQPLT FNRNADRSIE 
       360        370        380        390        400
RFSHNPNTTN NFSLTCKNGN NNWSEKNVSE QMTNEDKSFG CPSVRDQNRS 
       410        420        430        440        450
IFSVHCNVPL AHDFTNKEKN LETDNKIKQT SSSDSHSLNN KILNREVVNY 
       460        470        480        490        500
VQKRNSQISN ENDCNLQSCS LRSSENSINL SIAMDLYSPP FVYLSVLMAS 
       510        520        530        540        550
KPKEVTTVKV KAFIVTLTGN LSSSGGIWSI TAKVSDGTAY LDVDFVDEIL 
       560        570        580        590        600
TSLIGFSVPE MKQSKKDPLQ YQKFLEGLQK CQRDLIDLCC LMTISFNPSL 
       610        620 
SKAMVLALQD VNMEHLENLK KRLNK
Length:625
Mass (Da):70,144
Last modified:February 8, 2011 - v3
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i2BB449363DBF76B7
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A0A0MSU3A0A0A0MSU3_HUMAN
RecQ-mediated genome instability pr...
RMI1
415Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

<p>This subsection of the ‘Sequence’ section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence AAH20606 differs from that shown. Contaminating sequence. Potential poly-A sequence.Curated
The sequence AAH32494 differs from that shown. Contaminating sequence. Potential poly-A sequence.Curated
The sequence AAH39999 differs from that shown. Reason: Frameshift at position 375.Curated
The sequence AAH39999 differs from that shown. Reason: Frameshift at positions 377 and 444.Curated
The sequence AAH53549 differs from that shown. Contaminating sequence. Potential poly-A sequence.Curated
The sequence AAH64937 differs from that shown. Reason: Frameshift at positions 444 and 615.Curated
The sequence AAH64937 differs from that shown. Reason: Frameshift at positions 377 and 444.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti11E → G in BAB14325 (PubMed:14702039).Curated1
Sequence conflicti259A → T in BAB14325 (PubMed:14702039).Curated1
Sequence conflicti318E → D in AAH20606 (PubMed:15489334).Curated1
Sequence conflicti443L → F in AAH39999 (PubMed:15489334).Curated1

Natural variant

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section describes natural variant(s) of the protein sequence.<p><a href='/help/variant' target='_top'>More...</a></p>Natural variantiVAR_025556100Y → H1 PublicationCorresponds to variant dbSNP:rs17855932Ensembl.1
Natural variantiVAR_025557455N → S2 PublicationsCorresponds to variant dbSNP:rs1982151Ensembl.1

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
AK022950 mRNA Translation: BAB14325.1
AL732446 Genomic DNA No translation available.
BC020606 mRNA Translation: AAH20606.1 Sequence problems.
BC032494 mRNA Translation: AAH32494.1 Sequence problems.
BC039999 mRNA Translation: AAH39999.1 Frameshift.
BC053549 mRNA Translation: AAH53549.1 Sequence problems.
BC064937 mRNA Translation: AAH64937.1 Frameshift.

The Consensus CDS (CCDS) project

More...CCDSi		CCDS6669.1

NCBI Reference Sequences

More...RefSeqi		NP_079221.2, NM_024945.2
XP_005252268.1, XM_005252211.2
XP_005252270.1, XM_005252213.2
XP_011517336.1, XM_011519034.2
XP_016870629.1, XM_017015140.1

UniGene gene-oriented nucleotide sequence clusters

More...UniGenei		Hs.726327

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...Ensembli		ENST00000325875; ENSP00000317039; ENSG00000178966

Database of genes from NCBI RefSeq genomes

More...GeneIDi		80010

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		hsa:80010

UCSC genome browser

More...UCSCi		uc004anq.5 human

Keywords - Coding sequence diversityi

Polymorphism

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK022950 mRNA Translation: BAB14325.1
AL732446 Genomic DNA No translation available.
BC020606 mRNA Translation: AAH20606.1 Sequence problems.
BC032494 mRNA Translation: AAH32494.1 Sequence problems.
BC039999 mRNA Translation: AAH39999.1 Frameshift.
BC053549 mRNA Translation: AAH53549.1 Sequence problems.
BC064937 mRNA Translation: AAH64937.1 Frameshift.
CCDSiCCDS6669.1
RefSeqiNP_079221.2, NM_024945.2
XP_005252268.1, XM_005252211.2
XP_005252270.1, XM_005252213.2
XP_011517336.1, XM_011519034.2
XP_016870629.1, XM_017015140.1
UniGeneiHs.726327

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3MXNX-ray1.55A473-625[»]
3NBHX-ray2.00A475-625[»]
3NBIX-ray2.00A2-213[»]
4CGYX-ray2.85B1-219[»]
4CHTX-ray3.25B1-219[»]
4DAYX-ray3.30A473-625[»]
ProteinModelPortaliQ9H9A7
SMRiQ9H9A7
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi123066, 27 interactors
ComplexPortaliCPX-3301 BTR double Holliday Junction dissolution complex
CORUMiQ9H9A7
DIPiDIP-33324N
IntActiQ9H9A7, 18 interactors
MINTiQ9H9A7
STRINGi9606.ENSP00000317039

PTM databases

iPTMnetiQ9H9A7
PhosphoSitePlusiQ9H9A7

Polymorphism and mutation databases

BioMutaiRMI1
DMDMi322510109

Proteomic databases

EPDiQ9H9A7
jPOSTiQ9H9A7
MaxQBiQ9H9A7
PaxDbiQ9H9A7
PeptideAtlasiQ9H9A7
PRIDEiQ9H9A7
ProteomicsDBi81306

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000325875; ENSP00000317039; ENSG00000178966
GeneIDi80010
KEGGihsa:80010
UCSCiuc004anq.5 human

Organism-specific databases

Comparative Toxicogenomics Database

More...CTDi		80010
DisGeNETi80010
EuPathDBiHostDB:ENSG00000178966.15

GeneCards: human genes, protein and diseases

More...GeneCardsi		RMI1

H-Invitational Database, human transcriptome db

More...H-InvDBi		HIX0008132
HGNCiHGNC:25764 RMI1
HPAiHPA021661
MIMi610404 gene
neXtProtiNX_Q9H9A7
OpenTargetsiENSG00000178966
PharmGKBiPA134939007

GenAtlas: human gene database

More...GenAtlasi		Search...

Phylogenomic databases

eggNOGiENOG410INNR Eukaryota
ENOG410Z65I LUCA
GeneTreeiENSGT00940000161055
HOVERGENiHBG061190
InParanoidiQ9H9A7
KOiK10990
OMAiQGMEYQS
OrthoDBi531291at2759
PhylomeDBiQ9H9A7
TreeFamiTF316491

Enzyme and pathway databases

ReactomeiR-HSA-5685938 HDR through Single Strand Annealing (SSA)
R-HSA-5685942 HDR through Homologous Recombination (HRR)
R-HSA-5693554 Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)
R-HSA-5693568 Resolution of D-loop Structures through Holliday Junction Intermediates
R-HSA-5693579 Homologous DNA Pairing and Strand Exchange
R-HSA-5693607 Processing of DNA double-strand break ends
R-HSA-5693616 Presynaptic phase of homologous DNA pairing and strand exchange
R-HSA-6804756 Regulation of TP53 Activity through Phosphorylation
R-HSA-69473 G2/M DNA damage checkpoint

Miscellaneous databases

The Gene Wiki collection of pages on human genes and proteins

More...GeneWikii		RMI1

Database of phenotypes from RNA interference screens in Drosophila and Homo sapiens

More...GenomeRNAii		80010

Protein Ontology

More...PROi		PR:Q9H9A7

The Stanford Online Universal Resource for Clones and ESTs

More...SOURCEi		Search...

Gene expression databases

BgeeiENSG00000178966 Expressed in 205 organ(s), highest expression level in oocyte
CleanExiHS_RMI1
ExpressionAtlasiQ9H9A7 baseline and differential
GenevisibleiQ9H9A7 HS

Family and domain databases

InterProiView protein in InterPro
IPR033472 DUF1767
IPR039215 RMI1
IPR032199 RMI1_C
IPR013894 RMI1_N
PANTHERiPTHR14790 PTHR14790, 1 hit
PfamiView protein in Pfam
PF16099 RMI1_C, 1 hit
PF08585 RMI1_N, 1 hit
SMARTiView protein in SMART
SM01161 DUF1767, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiRMI1_HUMAN
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q9H9A7
Secondary accession number(s): Q05BX1
, Q05CW3, Q5SQG8, Q5SQG9, Q6P1Q4, Q6PI89, Q7Z6L6
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 21, 2006
Last sequence update: February 8, 2011
Last modified: January 16, 2019
This is version 140 of the entry and version 3 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations
  4. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
  5. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  6. Human chromosome 9
    Human chromosome 9: entries, gene names and cross-references to MIM
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