Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

COLlagen

Gene

col-102

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
COLlagenImported
Gene namesi
Name:col-102Imported
ORF Names:C18H7.3Imported, CELE_C18H7.3Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome IV

Organism-specific databases

WormBaseiC18H7.3 ; CE17428 ; WBGene00000676 ; col-102

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei7 – 29HelicalSequence analysisAdd BLAST23

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiQ9GZF7

Expressioni

Gene expression databases

BgeeiWBGene00000676

Structurei

3D structure databases

ProteinModelPortaliQ9GZF7
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini6 – 56Col_cuticle_NInterPro annotationAdd BLAST51

Keywords - Domaini

CollagenImported, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG3544 Eukaryota
ENOG410XNMM LUCA
GeneTreeiENSGT00910000144616
InParanoidiQ9GZF7
OMAiVAQMAMD
OrthoDBiEOG091G16DU

Family and domain databases

InterProiView protein in InterPro
IPR002486 Col_cuticle_N
IPR008160 Collagen
PfamiView protein in Pfam
PF01484 Col_cuticle_N, 1 hit
PF01391 Collagen, 2 hits
SMARTiView protein in SMART
SM01088 Col_cuticle_N, 1 hit

Sequencei

Sequence statusi: Complete.

Q9GZF7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTQAVLGVVN TVTAVSVITA ILLSVAILVD INNFSDEVSQ DLTQFRGYYD
60 70 80 90 100
DAWRTMMVNE GMKGLTARIS RQAGYATGGS QQCNCGSQAA GCPAGPPGAA
110 120 130 140 150
GEDGTPGEPG TDGEDGGNGM PGVAQMAMDA NGGACIKCPA GEPGPPGPEG
160 170 180 190 200
PAGPAGPAGN AGADGEAGAE GPAGEAGPPG PPGPDGKPGA AGSDGEAGAP
210 220 230 240 250
GTKTTNAPGE PGPAGPPGPP GPNGEAGAGS GPGPEGPAGP PGPNGKDGEA
260 270 280 290 300
GAPGKDGDAG ADGAPGTDAA YCPCPPRSAA LGAGGGAEPA GAAPEAAAAA
310 320 330 340 350
PEAAPEAAPA AEGAGGGAEP AGAAAPDAAA AAPEAAPAEA APAAEGAGGG
360 370 380 390 400
AEPAGAAPDA AAAAPEAAPA EAAPAAEGAG GGAEPAGAAA PDAAAAAPEA
410 420 430 440 450
AAAPEAAPAA EGAGGGAEPA GAAPEAAAAA PEGAGGGEAP PTNGKGGEAS
460
PAYPTGQSSY
Length:460
Mass (Da):41,016
Last modified:March 1, 2001 - v1
Checksum:iBF99CC80770E2202
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284604 Genomic DNA Translation: CCD63291.1
PIRiT33110
RefSeqiNP_499957.1, NM_067556.1
UniGeneiCel.25883

Genome annotation databases

EnsemblMetazoaiC18H7.3; C18H7.3; WBGene00000676
GeneIDi182802
KEGGicel:CELE_C18H7.3
UCSCiC18H7.3 c. elegans

Similar proteinsi

Entry informationi

Entry nameiQ9GZF7_CAEEL
AccessioniPrimary (citable) accession number: Q9GZF7
Entry historyiIntegrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: February 28, 2018
This is version 107 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health