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Entry version 120 (18 Sep 2019)
Sequence version 1 (01 Mar 2001)
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Protein

Non-classical arabinogalactan protein 31

Gene

AGP31

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Proteoglycan that may contribute to the strengthening of cell walls.1 Publication

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

  • response to jasmonic acid Source: TAIR

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Non-classical arabinogalactan protein 311 Publication
Alternative name(s):
Hydroxyproline-rich arabinogalactan protein 31Curated
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:AGP311 Publication
Ordered Locus Names:At1g28290Imported
ORF Names:F3H9.6Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiArabidopsis thaliana (Mouse-ear cress)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri3702 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliopsidaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000006548 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 1

Organism-specific databases

Arabidopsis Information Portal

More...
Araporti
AT1G28290

The Arabidopsis Information Resource

More...
TAIRi
locus:2032180 AT1G28290

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Cell wall, Secreted

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section denotes the presence of an N-terminal signal peptide.<p><a href='/help/signal' target='_top'>More...</a></p>Signal peptidei1 – 24Sequence analysisAdd BLAST24
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_000043282625 – 359Non-classical arabinogalactan protein 31Sequence analysisAdd BLAST335

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei714-hydroxyproline1 Publication1
<p>This subsection of the <a href="http://www.uniprot.org/help/ptm_processing_section">PTM / Processing</a> section specifies the position and type of each covalently attached glycan group (mono-, di-, or polysaccharide).<p><a href='/help/carbohyd' target='_top'>More...</a></p>Glycosylationi71O-linked (Ara...) hydroxyproline1 Publication1
Modified residuei754-hydroxyproline1 Publication1
Glycosylationi75O-linked (Ara...) hydroxyproline1 Publication1
Modified residuei794-hydroxyproline1 Publication1
Glycosylationi79O-linked (Ara...) hydroxyproline1 Publication1
Modified residuei824-hydroxyproline1 Publication1
Glycosylationi82O-linked (Ara...) hydroxyproline1 Publication1
Modified residuei834-hydroxyproline1 Publication1
Glycosylationi83O-linked (Ara...) hydroxyproline1 Publication1
Modified residuei874-hydroxyproline1 Publication1
Glycosylationi87O-linked (Ara...) hydroxyproline1 Publication1
Modified residuei914-hydroxyproline1 Publication1
Glycosylationi91O-linked (Ara...) hydroxyproline1 Publication1
Modified residuei954-hydroxyproline1 Publication1
Glycosylationi95O-linked (Ara...) hydroxyproline1 Publication1
Modified residuei994-hydroxyproline1 Publication1
Glycosylationi99O-linked (Ara...) hydroxyproline1 Publication1
Modified residuei1034-hydroxyproline1 Publication1
Glycosylationi103O-linked (Ara...) hydroxyproline1 Publication1
Modified residuei1074-hydroxyproline1 Publication1
Glycosylationi107O-linked (Ara...) hydroxyproline1 Publication1
Modified residuei1114-hydroxyproline1 Publication1
Glycosylationi111O-linked (Ara...) hydroxyproline1 Publication1
Modified residuei1144-hydroxyproline1 Publication1
Glycosylationi114O-linked (Ara...) hydroxyproline1 Publication1
Modified residuei1154-hydroxyproline1 Publication1
Glycosylationi115O-linked (Ara...) hydroxyproline1 Publication1
Modified residuei1194-hydroxyproline1 Publication1
Glycosylationi119O-linked (Ara...) hydroxyproline1 Publication1
Modified residuei1234-hydroxyproline1 Publication1
Glycosylationi123O-linked (Ara...) hydroxyproline1 Publication1
Modified residuei1274-hydroxyproline1 Publication1
Glycosylationi127O-linked (Ara...) hydroxyproline1 Publication1
Modified residuei1314-hydroxyproline1 Publication1
Glycosylationi131O-linked (Ara...) hydroxyproline1 Publication1
Modified residuei1354-hydroxyproline1 Publication1
Glycosylationi135O-linked (Ara...) hydroxyproline1 Publication1
Modified residuei1394-hydroxyproline1 Publication1
Glycosylationi139O-linked (Ara...) hydroxyproline1 Publication1
Modified residuei1434-hydroxyproline1 Publication1
Glycosylationi143O-linked (Ara...) hydroxyproline1 Publication1
Modified residuei1474-hydroxyproline1 Publication1
Glycosylationi147O-linked (Ara...) hydroxyproline1 Publication1
Modified residuei1514-hydroxyproline1 Publication1
Glycosylationi151O-linked (Ara...) hydroxyproline1 Publication1
Modified residuei1554-hydroxyproline1 Publication1
Glycosylationi155O-linked (Ara...) hydroxyproline1 Publication1
Modified residuei1594-hydroxyproline1 Publication1
Glycosylationi159O-linked (Ara...) hydroxyproline1 Publication1
Modified residuei1634-hydroxyproline1 Publication1
Glycosylationi163O-linked (Ara...) hydroxyproline1 Publication1
Modified residuei1674-hydroxyproline1 Publication1
Glycosylationi167O-linked (Ara...) hydroxyproline1 Publication1
Modified residuei1714-hydroxyproline1 Publication1
Glycosylationi171O-linked (Ara...) hydroxyproline1 Publication1
Modified residuei1754-hydroxyproline1 Publication1
Glycosylationi175O-linked (Ara...) hydroxyproline1 Publication1
Modified residuei1794-hydroxyproline1 Publication1
Glycosylationi179O-linked (Ara...) hydroxyproline1 Publication1
Modified residuei1834-hydroxyproline1 Publication1
Glycosylationi183O-linked (Ara...) hydroxyproline1 Publication1
Modified residuei1864-hydroxyproline1 Publication1
Glycosylationi186O-linked (Ara...) hydroxyproline1 Publication1
Modified residuei1874-hydroxyproline1 Publication1
Glycosylationi187O-linked (Ara...) hydroxyproline1 Publication1
Modified residuei1914-hydroxyproline1 Publication1
Glycosylationi191O-linked (Ara...) hydroxyproline1 Publication1
Modified residuei1954-hydroxyproline1 Publication1
Glycosylationi195O-linked (Ara...) hydroxyproline1 Publication1
Modified residuei1994-hydroxyproline1 Publication1
Glycosylationi199O-linked (Ara...) hydroxyproline1 Publication1
Modified residuei2034-hydroxyproline1 Publication1
Glycosylationi203O-linked (Ara...) hydroxyproline1 Publication1
Modified residuei2074-hydroxyproline1 Publication1
Glycosylationi207O-linked (Ara...) hydroxyproline1 Publication1
Modified residuei2104-hydroxyproline1 Publication1
Glycosylationi210O-linked (Ara...) hydroxyproline1 Publication1
Modified residuei2114-hydroxyproline1 Publication1
Glycosylationi211O-linked (Ara...) hydroxyproline1 Publication1
Modified residuei2154-hydroxyproline1 Publication1
Glycosylationi215O-linked (Ara...) hydroxyproline1 Publication1
Modified residuei2194-hydroxyproline1 Publication1
Glycosylationi219O-linked (Ara...) hydroxyproline1 Publication1
Glycosylationi226N-linked (GlcNAc...) asparaginePROSITE-ProRule annotation1
Glycosylationi269N-linked (GlcNAc...) asparaginePROSITE-ProRule annotation1

<p>This subsection of the <a href="http://www.uniprot.org/help/ptm_processing_section">PTM/processing</a> section describes post-translational modifications (PTMs). This subsection <strong>complements</strong> the information provided at the sequence level or describes modifications for which <strong>position-specific data is not yet available</strong>.<p><a href='/help/post-translational_modification' target='_top'>More...</a></p>Post-translational modificationi

Hydroxylated on numerous prolines in the proline-rich region.1 Publication
O-glycosylated on numerous hydroxyprolines in the proline-rich region; noncontiguous hydroxylproline residues are glycosylated with arabinogalactan.1 Publication

Keywords - PTMi

Glycoprotein, Hydroxylation, Proteoglycan

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q9FZA2

PRoteomics IDEntifications database

More...
PRIDEi
Q9FZA2

PTM databases

SwissPalm database of S-palmitoylation events

More...
SwissPalmi
Q9FZA2

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the ‘Expression’ section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified ‘at protein level’. <br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Expressed in vascular bundles of roots, leaves, sepals and stamen filaments, and pistils but not stigma.1 Publication

<p>This subsection of the ‘Expression’ section reports the experimentally proven effects of inducers and repressors (usually chemical compounds or environmental factors) on the level of protein (or mRNA) expression (up-regulation, down-regulation, constitutive expression).<p><a href='/help/induction' target='_top'>More...</a></p>Inductioni

Down-regulated by wounding, abscisic acid (ABA) and jasmonic acid (JA).1 Publication

Gene expression databases

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q9FZA2 baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q9FZA2 AT

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

Protein interaction database and analysis system

More...
IntActi
Q9FZA2, 1 interactor

STRING: functional protein association networks

More...
STRINGi
3702.AT1G28290.1

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q9FZA2

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section indicates the positions and types of repeated sequence motifs or repeated domains within the protein.<p><a href='/help/repeat' target='_top'>More...</a></p>Repeati90 – 10911 PublicationAdd BLAST20
Repeati122 – 14121 PublicationAdd BLAST20
Repeati142 – 16131 PublicationAdd BLAST20
Repeati162 – 18141 PublicationAdd BLAST20

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi44 – 65His-richPROSITE-ProRule annotationAdd BLAST22
Compositional biasi66 – 223Pro-richPROSITE-ProRule annotationAdd BLAST158

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the non-classical AGP family.Curated

Keywords - Domaini

Repeat, Signal

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG410JIFE Eukaryota
ENOG410Z3GS LUCA

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000029062

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q9FZA2

Identification of Orthologs from Complete Genome Data

More...
OMAi
CLIALWC

Database of Orthologous Groups

More...
OrthoDBi
1430187at2759

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (2)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is in its mature form or if it represents the precursor.<p><a href='/help/sequence_processing' target='_top'>More...</a></p>Sequence processingi: The displayed sequence is further processed into a mature form.

This entry describes 2 <p>This subsection of the ‘Sequence’ section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket
Isoform 1 (identifier: Q9FZA2-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MGFIGKSVLV SLVALWCFTS SVFTEEVNHK TQTPSLAPAP APYHHGHHHP
60 70 80 90 100
HPPHHHHPHP HPHPHPPAKS PVKPPVKAPV SPPAKPPVKP PVYPPTKAPV
110 120 130 140 150
KPPTKPPVKP PVSPPAKPPV KPPVYPPTKA PVKPPTKPPV KPPVYPPTKA
160 170 180 190 200
PVKPPTKPPV KPPVYPPTKA PVKPPTKPPV KPPVSPPAKP PVKPPVYPPT
210 220 230 240 250
KAPVKPPVSP PTKPPVTPPV YPPKFNRSLV AVRGTVYCKS CKYAAFNTLL
260 270 280 290 300
GAKPIEGATV KLVCKSKKNI TAETTTDKNG YFLLLAPKTV TNFGFRGCRV
310 320 330 340 350
YLVKSKDYKC SKVSKLFGGD VGAELKPEKK LGKSTVVVNK LVYGLFNVGP

FAFNPSCPK
Length:359
Mass (Da):38,489
Last modified:March 1, 2001 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i3C3BB28DBDE70420
GO
Isoform 2 (identifier: Q9FZA2-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     150-196: APVKPPTKPPVKPPVYPPTKAPVKPPTKPPVKPPVSPPAKPPVKPPV → PPV

Show »
Length:315
Mass (Da):33,932
Checksum:iDF527B0B44D04A3F
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Isoform 2 (identifier: Q9FZA2-2)
<p>This subsection of the ‘Sequence’ section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti150P → A in BAF01102 (Ref. 3) Curated1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_057583150 – 196APVKP…VKPPV → PPV in isoform 2. Add BLAST47

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AC021044 Genomic DNA Translation: AAF98426.1
CP002684 Genomic DNA Translation: AEE30943.1
CP002684 Genomic DNA Translation: AEE30944.1
AK229236 mRNA Translation: BAF01102.1
BT029488 mRNA Translation: ABL66745.1

Protein sequence database of the Protein Information Resource

More...
PIRi
B86409

NCBI Reference Sequences

More...
RefSeqi
NP_001077616.1, NM_001084147.1 [Q9FZA2-2]
NP_174150.1, NM_102594.3 [Q9FZA2-1]

Genome annotation databases

Ensembl plant genome annotation project

More...
EnsemblPlantsi
AT1G28290.1; AT1G28290.1; AT1G28290 [Q9FZA2-1]
AT1G28290.2; AT1G28290.2; AT1G28290 [Q9FZA2-2]

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
839723

Gramene; a comparative resource for plants

More...
Gramenei
AT1G28290.1; AT1G28290.1; AT1G28290 [Q9FZA2-1]
AT1G28290.2; AT1G28290.2; AT1G28290 [Q9FZA2-2]

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
ath:AT1G28290

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC021044 Genomic DNA Translation: AAF98426.1
CP002684 Genomic DNA Translation: AEE30943.1
CP002684 Genomic DNA Translation: AEE30944.1
AK229236 mRNA Translation: BAF01102.1
BT029488 mRNA Translation: ABL66745.1
PIRiB86409
RefSeqiNP_001077616.1, NM_001084147.1 [Q9FZA2-2]
NP_174150.1, NM_102594.3 [Q9FZA2-1]

3D structure databases

SMRiQ9FZA2
ModBaseiSearch...

Protein-protein interaction databases

IntActiQ9FZA2, 1 interactor
STRINGi3702.AT1G28290.1

PTM databases

SwissPalmiQ9FZA2

Proteomic databases

PaxDbiQ9FZA2
PRIDEiQ9FZA2

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT1G28290.1; AT1G28290.1; AT1G28290 [Q9FZA2-1]
AT1G28290.2; AT1G28290.2; AT1G28290 [Q9FZA2-2]
GeneIDi839723
GrameneiAT1G28290.1; AT1G28290.1; AT1G28290 [Q9FZA2-1]
AT1G28290.2; AT1G28290.2; AT1G28290 [Q9FZA2-2]
KEGGiath:AT1G28290

Organism-specific databases

AraportiAT1G28290
TAIRilocus:2032180 AT1G28290

Phylogenomic databases

eggNOGiENOG410JIFE Eukaryota
ENOG410Z3GS LUCA
HOGENOMiHOG000029062
InParanoidiQ9FZA2
OMAiCLIALWC
OrthoDBi1430187at2759

Miscellaneous databases

Protein Ontology

More...
PROi
PR:Q9FZA2

Gene expression databases

ExpressionAtlasiQ9FZA2 baseline and differential
GenevisibleiQ9FZA2 AT

Family and domain databases

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiAGP31_ARATH
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q9FZA2
Secondary accession number(s): F4HWJ6, Q0WP47
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 29, 2015
Last sequence update: March 1, 2001
Last modified: September 18, 2019
This is version 120 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
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