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Entry version 137 (31 Jul 2019)
Sequence version 2 (09 Jan 2007)
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Protein

Histone acetyltransferase HAC12

Gene

HAC12

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score:

Annotation score:4 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein inferred from homologyi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Acetyltransferase enzyme. Acetylates histones, giving a specific tag for transcriptional activation.By similarity

<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section describes the catalytic activity of an enzyme, i.e. a chemical reaction that the enzyme catalyzes.<p><a href='/help/catalytic_activity' target='_top'>More...</a></p>Catalytic activityi

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section describes the interaction between a single amino acid and another chemical entity. Priority is given to the annotation of physiological ligands.<p><a href='/help/binding' target='_top'>More...</a></p>Binding sitei1288Acetyl-CoABy similarity1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section specifies the position(s) and type(s) of zinc fingers within the protein.<p><a href='/help/zn_fing' target='_top'>More...</a></p>Zinc fingeri637 – 716TAZ-type 1PROSITE-ProRule annotationAdd BLAST80
Zinc fingeri998 – 1075PHD-typeAdd BLAST78
Zinc fingeri1407 – 1454ZZ-type 1PROSITE-ProRule annotationAdd BLAST48
Zinc fingeri1527 – 1575ZZ-type 2PROSITE-ProRule annotationAdd BLAST49
Zinc fingeri1588 – 1671TAZ-type 2PROSITE-ProRule annotationAdd BLAST84

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

  • flower development Source: TAIR
  • protein acetylation Source: TAIR
  • regulation of transcription, DNA-templated Source: InterPro

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionActivator, Acyltransferase, Chromatin regulator, Transferase
Biological processTranscription, Transcription regulation
LigandMetal-binding, Zinc

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Histone acetyltransferase HAC12 (EC:2.3.1.48By similarity)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:HAC12
Ordered Locus Names:At1g16710
ORF Names:F17F16.8, F17F16_21
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiArabidopsis thaliana (Mouse-ear cress)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri3702 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliopsidaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000006548 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 1

Organism-specific databases

Arabidopsis Information Portal

More...
Araporti
AT1G16710

The Arabidopsis Information Resource

More...
TAIRi
locus:2015676 AT1G16710

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00002697441 – 1706Histone acetyltransferase HAC12Add BLAST1706

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q9FWQ5

PRoteomics IDEntifications database

More...
PRIDEi
Q9FWQ5

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q9FWQ5

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q9FWQ5 baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q9FWQ5 AT

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
3702.AT1G16710.1

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q9FWQ5

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini1090 – 1526CBP/p300-type HATPROSITE-ProRule annotationAdd BLAST437

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni1213 – 1215Acetyl-CoA bindingBy similarity3
Regioni1232 – 1233Acetyl-CoA bindingBy similarity2

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi267 – 280Gln-richAdd BLAST14
Compositional biasi407 – 536Gln-richAdd BLAST130

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri637 – 716TAZ-type 1PROSITE-ProRule annotationAdd BLAST80
Zinc fingeri998 – 1075PHD-typeAdd BLAST78
Zinc fingeri1407 – 1454ZZ-type 1PROSITE-ProRule annotationAdd BLAST48
Zinc fingeri1527 – 1575ZZ-type 2PROSITE-ProRule annotationAdd BLAST49
Zinc fingeri1588 – 1671TAZ-type 2PROSITE-ProRule annotationAdd BLAST84

Keywords - Domaini

Repeat, Zinc-finger

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG410IRVA Eukaryota
ENOG410XPJ0 LUCA

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000242057

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q9FWQ5

KEGG Orthology (KO)

More...
KOi
K04498

Database of Orthologous Groups

More...
OrthoDBi
27931at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q9FWQ5

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
1.20.1020.10, 2 hits
3.30.40.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR031162 CBP_P300_HAT
IPR013178 Histone_AcTrfase_Rtt109/CBP
IPR035898 TAZ_dom_sf
IPR019786 Zinc_finger_PHD-type_CS
IPR011011 Znf_FYVE_PHD
IPR013083 Znf_RING/FYVE/PHD
IPR000197 Znf_TAZ
IPR000433 Znf_ZZ

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF08214 HAT_KAT11, 1 hit
PF02135 zf-TAZ, 2 hits
PF00569 ZZ, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM01250 KAT11, 1 hit
SM00551 ZnF_TAZ, 2 hits
SM00291 ZnF_ZZ, 2 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF57903 SSF57903, 1 hit
SSF57933 SSF57933, 2 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51727 CBP_P300_HAT, 1 hit
PS01359 ZF_PHD_1, 1 hit
PS50134 ZF_TAZ, 2 hits
PS01357 ZF_ZZ_1, 2 hits
PS50135 ZF_ZZ_2, 2 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 1 <p>This subsection of the ‘Sequence’ section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoform i produced by alternative splicing. AlignAdd to basket
Note: A number of isoforms are produced. According to EST sequences.

This entry has 1 described isoform and 4 potential isoforms that are computationally mapped.Show allAlign All

Isoform 1 (identifier: Q9FWQ5-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MNVQAHMSGQ RSGQVPNQGT VPQNNGNSQM QNLVGSNGAA TAVTGAGAAT
60 70 80 90 100
GSGTGVRPSR NIVGAMDHDI MKLRQYMQTL VFNMLQQRQP SPADAASKAK
110 120 130 140 150
YMDVARRLEE GLFKMAVTKE DYMNRSTLES RITSLIKGRQ INNYNQRHAN
160 170 180 190 200
SSSVGTMIPT PGLSQTAGNP NLMVTSSVDA TIVGNTNITS TALNTGNPLI
210 220 230 240 250
AGGMHGGNMS NGYQHSSRNF SLGSGGSMTS MGAQRSTAQM IPTPGFVNSV
260 270 280 290 300
TNNNSGGFSA EPTIVPQSQQ QQQRQHTGGQ NSHMLSNHMA AGVRPDMQSK
310 320 330 340 350
PSGAANSSVN GDVGANEKIV DSGSSYTNAS KKLQQGNFSL LSFCPDDLIS
360 370 380 390 400
GQHIESTFHI SGEGYSTTNP DPFDGAITSA GTGTKAHNIN TASFQPVSRV
410 420 430 440 450
NSSLSHQQQF QQPPNRFQQQ PNQIQQQQQQ FLNQRKLKQQ TPQQHRLISN
460 470 480 490 500
DGLGKTQVDS DMVTKVKCEP GMENKSQAPQ SQASERFQLS QLQNQYQNSG
510 520 530 540 550
EDCQADAQLL PVESQSDICT SLPQNSQQIQ QMMHPQNIGS DSSNSFSNLA
560 570 580 590 600
VGVKSESSPQ GQWPSKSQEN TLMSNAISSG KHIQEDFRQR ITGMDEAQPN
610 620 630 640 650
NLTEGSVIGQ NHTSTISESH NLQNSIGTTC RYGNVSHDPK FKNQQRWLLF
660 670 680 690 700
LRHARSCKPP GGRCQDQNCV TVQKLWSHMD NCADPQCLYP RCRHTKALIG
710 720 730 740 750
HYKNCKDPRC PVCVPVKTYQ QQANVRALAR LKNESSAVGS VNRSVVSNDS
760 770 780 790 800
LSANAGAVSG TPRCADTLDN LQPSLKRLKV EQSFQPVVPK TESCKSSIVS
810 820 830 840 850
TTEADLSQDA ERKDHRPLKS ETMEVKVEIP DNSVQAGFGI KETKSEPFEN
860 870 880 890 900
VPKPKPVSEP GKHGLSGDSP KQENIKMKKE PGWPKKEPGC PKKEELVESP
910 920 930 940 950
ELTSKSRKPK IKGVSLTELF TPEQVREHIR GLRQWVGQSK AKAEKNQAME
960 970 980 990 1000
NSMSENSCQL CAVEKLTFEP PPIYCTPCGA RIKRNAMYYT VGGGETRHYF
1010 1020 1030 1040 1050
CIPCYNESRG DTILAEGTSM PKAKLEKKKN DEEIEESWVQ CDKCQAWQHQ
1060 1070 1080 1090 1100
ICALFNGRRN DGGQAEYTCP YCYVIDVEQN ERKPLLQSAV LGAKDLPRTI
1110 1120 1130 1140 1150
LSDHIEQRLF KRLKQERTER ARVQGTSYDE IPTVESLVVR VVSSVDKKLE
1160 1170 1180 1190 1200
VKSRFLEIFR EDNFPTEFPY KSKVVLLFQK IEGVEVCLFG MYVQEFGSEC
1210 1220 1230 1240 1250
SNPNQRRVYL SYLDSVKYFR PDIKSANGEA LRTFVYHEIL IGYLEYCKLR
1260 1270 1280 1290 1300
GFTSCYIWAC PPLKGEDYIL YCHPEIQKTP KSDKLREWYL AMLRKAAKEG
1310 1320 1330 1340 1350
IVAETTNLYD HFFLQTGECR AKVTAARLPY FDGDYWPGAA EDIISQMSQE
1360 1370 1380 1390 1400
DDGRKGNKKG ILKKPITKRA LKASGQSDFS GNASKDLLLM HKLGETIHPM
1410 1420 1430 1440 1450
KEDFIMVHLQ HSCTHCCTLM VTGNRWVCSQ CKDFQLCDGC YEAEQKREDR
1460 1470 1480 1490 1500
ERHPVNQKDK HNIFPVEIAD IPTDTKDRDE ILESEFFDTR QAFLSLCQGN
1510 1520 1530 1540 1550
HYQYDTLRRA KHSSMMVLYH LHNPTAPAFV TTCNVCHLDI ESGLGWRCEV
1560 1570 1580 1590 1600
CPDYDVCNAC YKKEGCINHP HKLTTHPSLA DQNAQNKEAR QLRVLQLRKM
1610 1620 1630 1640 1650
LDLLVHASQC RSPVCLYPNC RKVKGLFRHG LRCKVRASGG CVLCKKMWYL
1660 1670 1680 1690 1700
LQLHARACKE SECDVPRCGD LKEHLRRLQQ QSDSRRRAAV MEMMRQRAAE

VAGTSG
Length:1,706
Mass (Da):190,272
Last modified:January 9, 2007 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i71CDA5B8B6184518
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 4 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
F4I4I8F4I4I8_ARATH
Histone acetyltransferase of the CB...
HAC12 At1g16710, F19K19.17
1,677Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A1P8ARU4A0A1P8ARU4_ARATH
Histone acetyltransferase of the CB...
HAC12 At1g16710, F19K19.17
1,470Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A1P8ARV7A0A1P8ARV7_ARATH
Histone acetyltransferase of the CB...
HAC12 At1g16710, F19K19.17
1,641Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A1P8ARV8A0A1P8ARV8_ARATH
Histone acetyltransferase of the CB...
HAC12 At1g16710, F19K19.17
1,680Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

<p>This subsection of the ‘Sequence’ section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence AAG09087 differs from that shown. Reason: Erroneous gene model prediction.Curated

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AC026237 Genomic DNA Translation: AAG09087.1 Sequence problems.
CP002684 Genomic DNA Translation: AEE29487.1

Protein sequence database of the Protein Information Resource

More...
PIRi
E86302

NCBI Reference Sequences

More...
RefSeqi
NP_173115.1, NM_101532.3 [Q9FWQ5-1]

Genome annotation databases

Ensembl plant genome annotation project

More...
EnsemblPlantsi
AT1G16710.1; AT1G16710.1; AT1G16710 [Q9FWQ5-1]

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
838242

Gramene; a comparative resource for plants

More...
Gramenei
AT1G16710.1; AT1G16710.1; AT1G16710 [Q9FWQ5-1]

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
ath:AT1G16710

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC026237 Genomic DNA Translation: AAG09087.1 Sequence problems.
CP002684 Genomic DNA Translation: AEE29487.1
PIRiE86302
RefSeqiNP_173115.1, NM_101532.3 [Q9FWQ5-1]

3D structure databases

SMRiQ9FWQ5
ModBaseiSearch...

Protein-protein interaction databases

STRINGi3702.AT1G16710.1

PTM databases

iPTMnetiQ9FWQ5

Proteomic databases

PaxDbiQ9FWQ5
PRIDEiQ9FWQ5

Genome annotation databases

EnsemblPlantsiAT1G16710.1; AT1G16710.1; AT1G16710 [Q9FWQ5-1]
GeneIDi838242
GrameneiAT1G16710.1; AT1G16710.1; AT1G16710 [Q9FWQ5-1]
KEGGiath:AT1G16710

Organism-specific databases

AraportiAT1G16710
TAIRilocus:2015676 AT1G16710

Phylogenomic databases

eggNOGiENOG410IRVA Eukaryota
ENOG410XPJ0 LUCA
HOGENOMiHOG000242057
InParanoidiQ9FWQ5
KOiK04498
OrthoDBi27931at2759
PhylomeDBiQ9FWQ5

Miscellaneous databases

Protein Ontology

More...
PROi
PR:Q9FWQ5

Gene expression databases

ExpressionAtlasiQ9FWQ5 baseline and differential
GenevisibleiQ9FWQ5 AT

Family and domain databases

Gene3Di1.20.1020.10, 2 hits
3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR031162 CBP_P300_HAT
IPR013178 Histone_AcTrfase_Rtt109/CBP
IPR035898 TAZ_dom_sf
IPR019786 Zinc_finger_PHD-type_CS
IPR011011 Znf_FYVE_PHD
IPR013083 Znf_RING/FYVE/PHD
IPR000197 Znf_TAZ
IPR000433 Znf_ZZ
PfamiView protein in Pfam
PF08214 HAT_KAT11, 1 hit
PF02135 zf-TAZ, 2 hits
PF00569 ZZ, 1 hit
SMARTiView protein in SMART
SM01250 KAT11, 1 hit
SM00551 ZnF_TAZ, 2 hits
SM00291 ZnF_ZZ, 2 hits
SUPFAMiSSF57903 SSF57903, 1 hit
SSF57933 SSF57933, 2 hits
PROSITEiView protein in PROSITE
PS51727 CBP_P300_HAT, 1 hit
PS01359 ZF_PHD_1, 1 hit
PS50134 ZF_TAZ, 2 hits
PS01357 ZF_ZZ_1, 2 hits
PS50135 ZF_ZZ_2, 2 hits

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
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MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiHAC12_ARATH
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q9FWQ5
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 9, 2007
Last sequence update: January 9, 2007
Last modified: July 31, 2019
This is version 137 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
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