UniProtKB - Q9FV02 (SKIP3_ARATH)
Protein
F-box protein SKIP3
Gene
SKIP3
Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Functioni
: protein ubiquitination Pathwayi
This protein is involved in the pathway protein ubiquitination, which is part of Protein modification.View all proteins of this organism that are known to be involved in the pathway protein ubiquitination and in Protein modification.
GO - Biological processi
- protein ubiquitination Source: UniProtKB-UniPathway
Keywordsi
Biological process | Ubl conjugation pathway |
Enzyme and pathway databases
UniPathwayi | UPA00143 |
Names & Taxonomyi
Protein namesi | Recommended name: F-box protein SKIP3Alternative name(s): F-box protein PP2-B9 Protein PHLOEM PROTEIN 2-LIKE B9 SKP1-interacting partner 3 |
Gene namesi | Name:SKIP3 Synonyms:PP2B9 Ordered Locus Names:At2g02350 ORF Names:T16F16.14 |
Organismi | Arabidopsis thaliana (Mouse-ear cress) |
Taxonomic identifieri | 3702 [NCBI] |
Taxonomic lineagei | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliopsida › eudicotyledons › Gunneridae › Pentapetalae › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis |
Proteomesi |
|
Organism-specific databases
Araporti | AT2G02350 |
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000272225 | 1 – 294 | F-box protein SKIP3Add BLAST | 294 |
Proteomic databases
PaxDbi | Q9FV02 |
PRIDEi | Q9FV02 |
ProteomicsDBi | 234569 |
Expressioni
Gene expression databases
ExpressionAtlasi | Q9FV02, baseline and differential |
Genevisiblei | Q9FV02, AT |
Interactioni
Subunit structurei
Part of a SCF (SKP1-cullin-F-box) protein ligase complex (By similarity).
Interacts with SKP1A/ASK1.
By similarity1 PublicationProtein-protein interaction databases
BioGRIDi | 169, 1 interactor |
STRINGi | 3702.AT2G02350.1 |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 21 – 67 | F-boxPROSITE-ProRule annotationAdd BLAST | 47 |
Phylogenomic databases
eggNOGi | ENOG502QRA4, Eukaryota |
HOGENOMi | CLU_050973_3_0_1 |
InParanoidi | Q9FV02 |
OMAi | HERSSYA |
OrthoDBi | 1051457at2759 |
PhylomeDBi | Q9FV02 |
Family and domain databases
InterProi | View protein in InterPro IPR036047, F-box-like_dom_sf IPR001810, F-box_dom IPR025886, PP2-like |
Pfami | View protein in Pfam PF00646, F-box, 1 hit PF14299, PP2, 1 hit |
SMARTi | View protein in SMART SM00256, FBOX, 1 hit |
SUPFAMi | SSF81383, SSF81383, 1 hit |
PROSITEi | View protein in PROSITE PS50181, FBOX, 1 hit |
i Sequence
Sequence statusi: Complete.
Q9FV02-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MIRLRTLIEK NRSESRKKIV SSTLDSLPEG CISNIISFTS PEDACVAAAV
60 70 80 90 100
SKIFESAVKS DIVWEKFLPT DYESLITPSR VFSSKKELYF SLCNDPLLIE
110 120 130 140 150
DGKMSLWLEK ASGKRCIMLS ATAMNLSSMA DMSQRFLWIP CPESRFETVA
160 170 180 190 200
ALREAYRFEF NCRMNTRVLS LRTRYSVYIV FKKADNWCGF KGVSIEAVVG
210 220 230 240 250
IVGEESFRSF ICFDTHGKGQ ARKRKVVAKP ELREDGWMET EIGEFYNEGG
260 270 280 290
LMSSDEVEIS TVEGKYAQQK RGLVILGIEI RPAKILEEFS VCRL
Sequence cautioni
The sequence AAC78517 differs from that shown. Reason: Erroneous gene model prediction.Curated
The sequence AAG21978 differs from that shown. Reason: Erroneous initiation. Truncated N-terminus.Curated
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AC005312 Genomic DNA Translation: AAC78517.2 Sequence problems. CP002685 Genomic DNA Translation: ANM61389.1 AF263379 mRNA Translation: AAG21978.1 Different initiation. |
PIRi | F84435 |
RefSeqi | NP_001318181.1, NM_001335105.1 NP_565282.3, NM_126292.3 |
Genome annotation databases
EnsemblPlantsi | AT2G02350.2; AT2G02350.2; AT2G02350 |
GeneIDi | 814766 |
Gramenei | AT2G02350.2; AT2G02350.2; AT2G02350 |
KEGGi | ath:AT2G02350 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AC005312 Genomic DNA Translation: AAC78517.2 Sequence problems. CP002685 Genomic DNA Translation: ANM61389.1 AF263379 mRNA Translation: AAG21978.1 Different initiation. |
PIRi | F84435 |
RefSeqi | NP_001318181.1, NM_001335105.1 NP_565282.3, NM_126292.3 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
BioGRIDi | 169, 1 interactor |
STRINGi | 3702.AT2G02350.1 |
Proteomic databases
PaxDbi | Q9FV02 |
PRIDEi | Q9FV02 |
ProteomicsDBi | 234569 |
Genome annotation databases
EnsemblPlantsi | AT2G02350.2; AT2G02350.2; AT2G02350 |
GeneIDi | 814766 |
Gramenei | AT2G02350.2; AT2G02350.2; AT2G02350 |
KEGGi | ath:AT2G02350 |
Organism-specific databases
Araporti | AT2G02350 |
Phylogenomic databases
eggNOGi | ENOG502QRA4, Eukaryota |
HOGENOMi | CLU_050973_3_0_1 |
InParanoidi | Q9FV02 |
OMAi | HERSSYA |
OrthoDBi | 1051457at2759 |
PhylomeDBi | Q9FV02 |
Enzyme and pathway databases
UniPathwayi | UPA00143 |
Miscellaneous databases
PROi | PR:Q9FV02 |
Gene expression databases
ExpressionAtlasi | Q9FV02, baseline and differential |
Genevisiblei | Q9FV02, AT |
Family and domain databases
InterProi | View protein in InterPro IPR036047, F-box-like_dom_sf IPR001810, F-box_dom IPR025886, PP2-like |
Pfami | View protein in Pfam PF00646, F-box, 1 hit PF14299, PP2, 1 hit |
SMARTi | View protein in SMART SM00256, FBOX, 1 hit |
SUPFAMi | SSF81383, SSF81383, 1 hit |
PROSITEi | View protein in PROSITE PS50181, FBOX, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | SKIP3_ARATH | |
Accessioni | Q9FV02Primary (citable) accession number: Q9FV02 Secondary accession number(s): F4IQC4, Q9ZVQ7 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | January 23, 2007 |
Last sequence update: | January 23, 2007 | |
Last modified: | October 7, 2020 | |
This is version 99 of the entry and version 2 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Plant Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- Arabidopsis thaliana
Arabidopsis thaliana: entries and gene names - PATHWAY comments
Index of metabolic and biosynthesis pathways