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Entry version 119 (07 Apr 2021)
Sequence version 2 (16 Aug 2005)
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Protein

Uncharacterized protein At5g08430

Gene

At5g08430

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Uncharacterized protein At5g08430
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Ordered Locus Names:At5g08430
ORF Names:F8L15_160
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiArabidopsis thaliana (Mouse-ear cress)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri3702 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliopsidaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000006548 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 5

Organism-specific databases

Arabidopsis Information Portal

More...
Araporti
AT5G08430

The Arabidopsis Information Resource

More...
TAIRi
locus:2150828, AT5G08430

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00002206201 – 553Uncharacterized protein At5g08430Add BLAST553

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q9FT92

PRoteomics IDEntifications database

More...
PRIDEi
Q9FT92

ProteomicsDB: a multi-organism proteome resource

More...
ProteomicsDBi
242898

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q9FT92

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q9FT92, baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q9FT92, AT

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGRID)

More...
BioGRIDi
16020, 1 interactor

STRING: functional protein association networks

More...
STRINGi
3702.AT5G08430.1

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

Secondary structure

1553
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details

3D structure databases

Biological Magnetic Resonance Data Bank

More...
BMRBi
Q9FT92

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q9FT92

Database of comparative protein structure models

More...
ModBasei
Search...

Protein Data Bank in Europe - Knowledge Base

More...
PDBe-KBi
Search...

Miscellaneous databases

Relative evolutionary importance of amino acids within a protein sequence

More...
EvolutionaryTracei
Q9FT92

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini26 – 109SWIB/MDM2PROSITE-ProRule annotationAdd BLAST84
Domaini150 – 275Plus3PROSITE-ProRule annotationAdd BLAST126
Domaini497 – 551GYFPROSITE-ProRule annotationAdd BLAST55

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG1862, Eukaryota
KOG1946, Eukaryota

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_019956_0_0_1

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q9FT92

Identification of Orthologs from Complete Genome Data

More...
OMAi
HEDQTKH

Database of Orthologous Groups

More...
OrthoDBi
306703at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q9FT92

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
1.10.245.10, 1 hit
2.170.260.30, 1 hit
3.30.1490.40, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR003169, GYF
IPR035445, GYF-like_dom_sf
IPR004343, Plus-3_dom
IPR036128, Plus3-like_sf
IPR036885, SWIB_MDM2_dom_sf
IPR003121, SWIB_MDM2_domain

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF02213, GYF, 1 hit
PF03126, Plus-3, 1 hit
PF02201, SWIB, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00444, GYF, 1 hit
SM00719, Plus3, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF159042, SSF159042, 1 hit
SSF47592, SSF47592, 1 hit
SSF55277, SSF55277, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50829, GYF, 1 hit
PS51360, PLUS3, 1 hit
PS51925, SWIB_MDM2, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

Q9FT92-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGDITWVEEG NGSATSSRKR KARPKRFEFV GWGSRQLIEF LHSLGKDTSE
60 70 80 90 100
MISRYDVSDT IAKYISKEGL LDPSNKKKVV CDKRLVLLFG TRTIFRMKVY
110 120 130 140 150
DLLEKHYKEN QDDSDFDFLY EDEPQIICHS EKIAKRTSKV VKKPRGTFAA
160 170 180 190 200
IVSDNIKLLY LRKSLVQELL KSPDTFEGKM LGSFVRIKSD PNDYLQKYPY
210 220 230 240 250
QLVQVTGVKK EHGTDDFLLQ VTNYVKDVSI SVLSDDNFSQ EECEDLHQRI
260 270 280 290 300
KNGLLKKPTI VEMEEKAKKL HKDQTKHWLG REIELLKRLI DRANEKGWRR
310 320 330 340 350
ELSEYLDKRE LLQNPDEQAR LLREVPEVIG EELVQNPEVS SPEAHKSDNE
360 370 380 390 400
QRLSESPLSC IHETPEARNL FGGEDQQFNN GYVMSNPITT PGITSCATEI
410 420 430 440 450
NKGLPTWIAS AGAEYLHVDV EQPANGIIGG ETPTEESKVS QLQSSIPVNN
460 470 480 490 500
VDNGSQVQPN PSEVIELSDD DEDDNGDGET LDPKVEDVRV LSYDKEKLNW
510 520 530 540 550
LYKDPQGLVQ GPFSLTQLKA WSDAEYFTKQ FRVWMTGESM ESAVLLTDVL

RLV
Length:553
Mass (Da):63,068
Last modified:August 16, 2005 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iD9F6EB6326C26B49
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A1P8BDA8A0A1P8BDA8_ARATH
SWIB/MDM2 and Plus-3 and GYF domain...
At5g08430, F8L15.160, F8L15_160
438Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

<p>This subsection of the 'Sequence' section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence CAC08343 differs from that shown. Reason: Erroneous gene model prediction.Curated

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AL392174 Genomic DNA Translation: CAC08343.1 Sequence problems.
CP002688 Genomic DNA Translation: AED91300.1
AY069913 mRNA No translation available.

NCBI Reference Sequences

More...
RefSeqi
NP_196460.2, NM_120928.3

Genome annotation databases

Ensembl plant genome annotation project

More...
EnsemblPlantsi
AT5G08430.1; AT5G08430.1; AT5G08430

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
830742

Gramene; a comparative resource for plants

More...
Gramenei
AT5G08430.1; AT5G08430.1; AT5G08430

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
ath:AT5G08430

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL392174 Genomic DNA Translation: CAC08343.1 Sequence problems.
CP002688 Genomic DNA Translation: AED91300.1
AY069913 mRNA No translation available.
RefSeqiNP_196460.2, NM_120928.3

3D structure databases

Select the link destinations:

Protein Data Bank Europe

More...
PDBei

Protein Data Bank RCSB

More...
RCSB PDBi

Protein Data Bank Japan

More...
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1V32NMR-A25-112[»]
1WH2NMR-A488-552[»]
BMRBiQ9FT92
SMRiQ9FT92
ModBaseiSearch...
PDBe-KBiSearch...

Protein-protein interaction databases

BioGRIDi16020, 1 interactor
STRINGi3702.AT5G08430.1

PTM databases

iPTMnetiQ9FT92

Proteomic databases

PaxDbiQ9FT92
PRIDEiQ9FT92
ProteomicsDBi242898

Genome annotation databases

EnsemblPlantsiAT5G08430.1; AT5G08430.1; AT5G08430
GeneIDi830742
GrameneiAT5G08430.1; AT5G08430.1; AT5G08430
KEGGiath:AT5G08430

Organism-specific databases

AraportiAT5G08430
TAIRilocus:2150828, AT5G08430

Phylogenomic databases

eggNOGiKOG1862, Eukaryota
KOG1946, Eukaryota
HOGENOMiCLU_019956_0_0_1
InParanoidiQ9FT92
OMAiHEDQTKH
OrthoDBi306703at2759
PhylomeDBiQ9FT92

Miscellaneous databases

EvolutionaryTraceiQ9FT92

Protein Ontology

More...
PROi
PR:Q9FT92

Gene expression databases

ExpressionAtlasiQ9FT92, baseline and differential
GenevisibleiQ9FT92, AT

Family and domain databases

Gene3Di1.10.245.10, 1 hit
2.170.260.30, 1 hit
3.30.1490.40, 1 hit
InterProiView protein in InterPro
IPR003169, GYF
IPR035445, GYF-like_dom_sf
IPR004343, Plus-3_dom
IPR036128, Plus3-like_sf
IPR036885, SWIB_MDM2_dom_sf
IPR003121, SWIB_MDM2_domain
PfamiView protein in Pfam
PF02213, GYF, 1 hit
PF03126, Plus-3, 1 hit
PF02201, SWIB, 1 hit
SMARTiView protein in SMART
SM00444, GYF, 1 hit
SM00719, Plus3, 1 hit
SUPFAMiSSF159042, SSF159042, 1 hit
SSF47592, SSF47592, 1 hit
SSF55277, SSF55277, 1 hit
PROSITEiView protein in PROSITE
PS50829, GYF, 1 hit
PS51360, PLUS3, 1 hit
PS51925, SWIB_MDM2, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiY5843_ARATH
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q9FT92
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 16, 2005
Last sequence update: August 16, 2005
Last modified: April 7, 2021
This is version 119 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Technical termi

3D-structure, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
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